New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 497023	54 (1.100)	4 (0.090)	4/246	NT	6.5%	coding (895/2388 nt)	PP_0409	two‑component system sensor histidine kinase
	?	NC_002947	= 497096	64 (1.390)					coding (968/2388 nt)	PP_0409	two‑component system sensor histidine kinase

CTTCTGGCAGAACATGGCCTTGTTGTTCGGTCTGTTGCTGTTGTGTGCCTTGGCCACGCTGGTGTGGCAACGCCGTCAGCAGCGCCAGCTGGAGCGCAGCCTGTTGGCCGCGCGAGAAAGCCTTGTTGAGCGCCAGGTGCGCGAAGAGGCGTTGCGGCTGAGCCAGTTCGCCATCGATCAGAGCACCGTGGGTATCCTCTGGGTCAACTGGGACAGCCATGTGCGTTACGCCAACCATGCCGCCGAGCGCATGTTGGGCTACAGCGAAGGGGCGTTGCTGGAGCGGCCGC  >  NC_002947/496950‑497239                                                                                                                                                   |                                                                                                                                                cTTCTGGCAGAACATGGCCTTGTTGTTCGGTCTGTTGCTGTTGTGTGCCGTGGCCACGCTGGTGTGGCAACGCCGTCAGCAGCGCCAGCTGGAGCGCAGCCTGTTGGCCGCGCGAGAAAGCCTTGTTGAGCGCCAGGTGCGCGAAGAgg                                                                                                                                               >  8:69197‑M2/1‑147 (MQ=255)       gCAGAACATGGCCTTGTTGTTTGGTCTGTTGCTGTTGTGTGCCTTGGCCACGCTGGTGTGGCAACGCCGTCAGCAGCGCCAGCTGGAGCGCAGCCTGTTGGCCGCGCGAGAAAGCCTTGTTGAGCGCCAGGTGCGCGAAGAggcgttgc                                                                                                                                         <  4:87932‑M2/149‑9 (MQ=255)        cAGAACATGGCCTTGTTGTTCGGTCTGTTGCTGTTGTGTGCCTTGGCCACGCTGGTGTGGCAACGCCGTCAGCAGCGCCAGCTGGAGCGCAGCCTGTTGGCCGCGCGAGAAAGCCTTGTTGAGCGCCAGGTGCGCGAAGAGGCGTTGCg                                                                                                                                        >  8:199306/1‑149 (MQ=255)               tGGCCTTGTTGTTCGGTCTGTTGCTGTTGTGTGCCTTGGCCACGCTGGTGTGGCAACGCCGTCAGCAGCGCCAGCTGGAGCGCAGCCTGTTGGGCGCGCGAGAAAGCCTTGTTGAGCGCCAGGTGCGCGAAGAGGCGTTGCGGCTGAGc                                                                                                                                 <  7:252696/149‑1 (MQ=255)                     tgttgtTCGGTCCGTTGCTGTTGTGTGCCTTGGCCACGCTGGTGTGGCAACGCCGTCAGCAGCGCCAGCTGGAGCGCAGCCTGTTGGCCGCGCGAGAAAGCCTTGTTGAGCGCCAGGTGCGCGAAGAggcgt                                                                                                                                            >  2:264227‑M2/1‑127 (MQ=255)                      gttgttCGGTCTGTTGCTGTTGTGTGCCTTGGCCACGCTGGTGTGGCAACGCCGTCAGCAGCGCCAGCTGGAGCGCAGCCTGTTGGCCGCGCGAGAAAGCCTTGTTGAGCGCCAGGTGCGCGAAGAGGCGTTGCGGCTGAGCCAGTTc                                                                                                                           <  4:64430/148‑1 (MQ=255)                       ttgttCGGTCTGTTGCTGTTGTGTGCCTTGGCCACGCTGGTGTGGCAACGCCGTCAGCAGCGCCAGCTGGAGCGCAGCCTGTTGGCCGCGCGAGAAAGCCTTGTTGAGCGCCAGGTGCGCGAAGAGGCGTTGCGGCTGAGCCAGTTCGc                                                                                                                         <  6:120104/149‑1 (MQ=255)                          ttCGGTCTGTTGCTGTTGTGTGCCTTGGCCACGCTGGTGTGGCAACGCCGTCAGCAGCGCCAGCTGGAGCGCAGCCTGTTGGCCGCGCGAGAAAGCCTTGTTGAGCGCCAGGTGCGCGAAGAGGCGTTGCGGCTGAGCCAGTTCGCCAt                                                                                                                      >  8:67377/1‑149 (MQ=255)                            cGGTCTGTTGCTGTTGTGTGCCTTGGCCACGCTGGTGTGGCAACGCCGTCAGCAGCGCCAGCTGGAGCGCAGCCTGTTGGCCGCGCGAGAAAGCCTTGTTGAGCGCCAGGTGCGCGAAGAGGCGTTGCGGCTGAGCCAGTTCGCCATc                                                                                                                     >  6:203467/1‑148 (MQ=255)                              gTCTGTTGCTGTTGTGTGCCTTGGCCACGCTGGTGTGGCAACGCCGTCAGCAGCGCCAGCTGGAGCGCAGCCTGTTGGCCGCGCGAGAAAGCCTTGTTGAGCGCCAGGTGCGCGAAGAGGCGTTGCGGCTGAGCCAGTTCGCCATCGAt                                                                                                                  <  5:70262/149‑1 (MQ=255)                               tCTGTTGCTGTTGTGTGCCTTGGCCACGCTGGTGTGGCAACGCCGTCAGCAGCGCCAGCTGGAGCGCAGCCTGTTGGCCGCGCGAGAAAGCCTTGTTGAGCGCCAGGTGCGCGAAGAGGCGTTGCGGCTGAGCCAGTTCGCCATCGATc                                                                                                                 <  1:49059/149‑1 (MQ=255)                                 tgttgctgttgTGTGCCTTGGCCACGCTGGTGTGGCAACGCCGTCAGCAGCGCCAGCTGGAGCGCAGCCTGTTGGCCGCGCGAGAAAGCCTTGTTGAGCGCCAGGTGCGCGAAGAGGCGTTGCGGCTGAGCCAGTTCGCCATCGAt                                                                                                                  >  2:33651/1‑146 (MQ=255)                                   ttgctgttgTGTGCCTTGGCCACGCTGGTGTGGCAACGCCGTCAGCAGCGCCAGCTGGAGCGCAGCCTGTTGGCCGCGCGAGAAAGCCTTGTTGAGCGCCAGGTGCGCGAAGAGGCGTTGCGGCTGAGCCAGTTCGCCATCGATCa                                                                                                                <  3:20080/146‑1 (MQ=255)                                       tgttgtGTGCCTTGGCCACGCTGGTGTGGCAACGCCGTCAGCAGCGCCAGCTGGAGCGCAGCCTGTTGGCCGCGCGAGAAAGCCTTGTTGAGCGCCAGGTGCGCGAAGAGGCGTTGCGGCTGAGCCAGTTCGCCATCGATCAGAGCAcc                                                                                                         >  7:241862/1‑149 (MQ=255)                                         ttgtGTGCCTTGGCCACGCTGGTGTGGCAACGCCGTCAGCAGCGCCAGCTGGAGCGCAGCCTGTTGGCCGCGCGAGAAAGCCTTGTTGAGCGCCAGGTGCGCGAAGAGGCGTTGCGGCTGAGCCAGTTCGCCATCGATCAGAGCACCGt                                                                                                       >  8:37597/1‑149 (MQ=255)                                           gtgtgCCTTGGCCACGCTGGTGTGGCAACGCCGTCAGCAGCGCCAGCTGGAGCGCAGCCTGTTGGCCGCGCGAGAAAGCCTTGTTGAGCGCCAGGTGCGCGAAGAGGCGTTGCGGCTGAGCCAGTTCGCCATCGATCAGAGCACCGTgg                                                                                                     >  3:209672/1‑149 (MQ=255)                                            tgtgCCTTGGCCACGCTGGTGTGGCAACGCCGTCAGCAGCGCCAGCTGGAGCGCAGCCTGTTGGCCGCGCGAGAAAGCCTTGTTGAGCGCCAGGTGCGCGAAGAGGCGTTGCGGCTGAGCCAGTTCGCCATCGATCAGAGCACCGTgg                                                                                                     <  8:241862/148‑1 (MQ=255)                                             gtgCCTTGGCCACGCTGGTGTGGCAACGCCGTCAGCAGCGCCAGCTGGAGCGCAGCCTGTTGGCCGCGCGAGAAAGCCTTGTTGAGCGCCAGGTGCGCGAAGAGGCGTTGCGGCTg                                                                                                                                    >  6:70954/1‑116 (MQ=255)                                              tgCCTTGGCCACGCTGGTGTGGCAACGCCGTCAGCAGCGCCAGCTGGAGCGCAGCCTGTTGGCCGCGCGAGAAAGCCTTGTTGAGCGCCAGGTGCGCGAAGAGGCGTTGCGGCTGAGCCAGTTCGCCATCGATCAGAGCACCGTGGGt                                                                                                   <  7:37597/148‑1 (MQ=255)                                              tgCCTTGGCCACGCTGGTGTGGCAACGCCGTCAGCAGCGCCAGCTGGAGCGCAGCCTGTTGGCCGCGCGAGAAAGCCTTGTTGAGCGCCAGGTGCGCGAAGAGGCGTTGCGGCTGAGCCAGTTCGCCATCGATCAGAGCACCGTGGGt                                                                                                   <  4:209672/148‑1 (MQ=255)                                               gCCTTGGCCACGCTGGTGTGGCAACGCCGTCAGCAGCGCCAGCTGGAGCGCAGCCTGTTGGCCGCGCGAGAAAGCCTTGTTGAGCGCCAGGTGCGCGAAGAGGCGTTGCGGCTGAGCCAGTTCGCCATCGATCAGAGCACCGTGGGTAt                                                                                                 >  4:168019/1‑149 (MQ=255)                                               gCCTTGGCCACGCTGGTGTGGCAACGCCGTCAGCAGCGCCAGCTGGAGCGCAGCCTATTGGCCGCGCGAGAAAGCCTTGTTGAGCGCCAGGTGCGCGAAGAGGCGTTGCGGCTGAGCCAGTTCGCCATCGATCAGAGCACCGTGGGTAt                                                                                                 >  1:239319/1‑149 (MQ=255)                                                 cTTGGCCACGCTGGTGTGGCAACGCCGTCAGCAGCGCCAGCTGGAGCGCAGCCTGTTGGCCGCGCGAGAAAGCCTTGTTGAGCGCCAGGTGCGCGAAGAGGCGTTGCGGCTGAGCCAGTTCGc                                                                                                                         >  2:70634/1‑123 (MQ=255)                                                 cTTGGCCACGCTGGTGTGGCAACGCCGTCAGCAGCGCCAGCTGGAGCGCAGCCTGTTGGCCGCGCGAGAAAGCCTTGTTGAGCGCCAGGTGCGCGAAGAGGCGTTGCGGCTGAGCCAGTTCGc                                                                                                                         <  1:70634/123‑1 (MQ=255)                                                  ttGGCCACGCTGGTGTGGCAACGCCGTCAGCAGCGCCAGCTGGAGCGCAGCCTGTTGGCCGCGCGAGAAAGCCTTGTTGAGCGCCAGGTGCGCGAAGAGGCGTTGCGGCTGAGCCAGTTCGCCATCGATCAGAGCACCGTGGGTATCct                                                                                              >  1:205433/1‑149 (MQ=255)                                                     gCCACGCTGGTGTGGCAACGCCGTCAGCAGCGCCAGCTGGAGCGCAGCCTGTTGGCCGCGCGAGAAAGCCTTGTTGAGCGCCAGGTGCGCGAAGAGGCGTTGCGGCTGAGCCAGTTCGCCATCGATCAGAGCACCGTGGGTATCCTCTg                                                                                           >  8:154106/1‑149 (MQ=255)                                                     gCCACGCTGGTGTGGCAACGCCGTCAGCAGCGCCAGCTGGAGCGCAGCCTGTTGGCCGCGCGAGAAAGCCTTGTTGAGCGCCAGGTGCGCGAAGAGGCGTTGCGGCTGAGCCAGTTCGCCATCGATCAGAGCACCGTGGGTATCCTCTg                                                                                           <  7:67377/149‑1 (MQ=255)                                                                gtgGCAACGCCGTCAGCAGCGCCAGCTGGAGCGCAGCCTGTTGGCCGCGCGAGAAAGCCTTGTTGAGCGCCAGGTGCGCGAAGAGGCGTTGCGGCTGAGCCAGTTCGCCATCGATCAGAGCACCGTGGGt                                                                                                   >  4:183997/1‑130 (MQ=255)                                                                gtgGCAACGCCGTCAGCAGCGCCAGCTGGAGCGCAGCCTGTTGGCCGCGCGAGAAAGCCTTGTTGAGCGCCAGGTGCGCGAAGAGGCGTTGCGGCTGAGCCAGTTCGCCATCGATCAGAGCACCGTGGGt                                                                                                   <  3:183997/130‑1 (MQ=255)                                                                 tgGCAACGCCGTCAGCAGCGCCAGCTGGAGCGCAGCCTGTTGGCCGCGCGAGAAAGCCTTGTTGAGCGCCAGGTGCGCGAAGAGGCGTTGCGGCTGAGCCAGTTCGCCATCGATCAGAGCACCGTGGGTATCCTCTGGGTCAACTGGGa                                                                               <  6:300423/149‑1 (MQ=255)                                                                 tgGCAACGCCGTCAGCAGCGCCAGCTGGAGCGCAGCCTGTTGGCCGCGCGAGAAAGCCTTGTTGAGCGCCAGGTGCGCGAAGAGGCGTTGCGGCTGAGCCAGTTCGCCATCGATCAGAGCACCGTGGGTATCCTCTGGGTCAACTGGGa                                                                               >  5:300423/1‑149 (MQ=255)                                                                   gCAACGCCGTCAGCAGCGCCAGCTGGAGCGCAGCCTGTTGGCCGCGCGAGAAAGCCTTGTTGAGCGCCAGGTGCGCGTAGAGGCGTTGCGGCTGAGCCAGTTCGCCATCGATCAGAGCACCGTGGGTATCCTCTGGGTCAACTGGGa                                                                               >  1:98004/1‑147 (MQ=255)                                                                   gCAACGCCGTCAGCAGCGCCAGCTGGAGCGCAGCCTGTTGGCCGCGCGAGAAAGCCTTGTTGAGCGCCAGGTGCGCGAAGAGGCGTTGCGGCTGAGCCAGTTCGCCATCGATCa                                                                                                                <  4:102832/114‑1 (MQ=255)                                                                   gCAACGCCGTCAGCAGCGCCAGCTGGAGCGCAGCCTGTTGGCCGCGCGAGAAAGCCTTGTTGAGCGCCAGGTGCGCGAAGAGGCGTTGCGGCTGAGCCAGTTCGCCATCGATCa                                                                                                                >  3:102832/1‑114 (MQ=255)                                                                    cAACGCCGTCAGCAGCGCCAGCTGGAGCGCAGCCTGTTGGCCGCGCGAGAAAGCCTTGTTGAGCGCCAGGTGCGCGAAGAggcgttgccacaccagcgtggccaaggcacacaacagcaacagaccgaacaacaaggcca                                                                                     <  6:114875‑M2/140‑61 (MQ=255)                                                                    cAACGCCGTCAGCAGCGCCAGCTGGAGCGCAGCCTGTTGGCCGCGCGAGAAAGCCTTGTTGAGCGCCAGGTGCGCGAAGAggcgttgccacaccagcgtggccaaggcacacaacagcaacagaccgaacaacaaggcca                                                                                     >  5:114875‑M2/1‑80 (MQ=255)                                                                     aaCGCCGTCAGCAGCGCCAGCTGGAGCGCAGCCTGTTGGCCGCGCGAGAAAGCCTTGTTGAGCGCCAGGTGCGCGAAGAGGCGTTGCGGCTGAGCCAGTTCGCCATCGATCAGAGCACCGTGGGTATCCTCTGGGTCAACTGGGACAGc                                                                           >  5:179192/1‑149 (MQ=255)                                                                     aaCGCCGTCAGCAGCGCCAGCTGGAGCGCAGCCTGTTGGCCGCGCGAGAAAGCCTTGTTGAGCGCCAGGTGCGCGAAGAGGCGTTGCGGCTGAGCCAGTTCGCCATCGATCAGAGCACCGTGGGTATCCTCTGGGTCAACTGGGACAGc                                                                           >  3:219030/1‑149 (MQ=255)                                                                        gcagTCAGCAGCGCCAGCTGGAGCGCAGCCTGTTGGCCGCGCGAGAAAGCCTTGTTGAGCGCCAGGTGAGCGAAGAGGCGTTGCGGCTGAGCCAGTTCGCCATCGATCAGAGCACCGTGGGTATCCTCTGGGTCAACTGGGACAGCCAt                                                                        >  2:266184/4‑149 (MQ=255)                                                                        gCCGTCAGCAGCGCCAGCTGGAGCGCAGCCTGTTGGCCGCGCGAGAAAGCCTTGTTGAGCGCCAGGTGCGCGAAGAGGCGTTGCGGCTGAGCCAGTTCGCCATCGATCAGAGCACCGTGGGTATCCTCTGGGTCAACTGGGACAGCCAt                                                                        <  6:179192/149‑1 (MQ=255)                                                                          cGTCAGCAGCGCCAGCTGGAGCGCAGCCTGTTGGCCGCGCGAGAAAGCCTTGTTGAGCGCCAGGTGCGCGAAGAggcgttgccacaccagcgtggccaaggcacacaacagcaacagaccgaacaacaaggccatgttctgccagaagc                                                                      <  8:203743‑M2/149‑76 (MQ=255)                                                                          cGTCAGCAGCGCCAGCTGGAGCGCAGCCTGTTGGCCGCGCGAGAAAGCCTTGTTGAGCGCCAGGTGCGCGAAGAGGCGTTGCGGCTGAGCCAGTTCGCCATCGATCAGAGCACCGTGGGTATCCTCTGGGTCAACTGGGACAGCCAtgt                                                                      >  5:197083/1‑149 (MQ=255)                                                                            tCAGCAGCGCCAGCTGGAGCGCAGCCTGTTGGCCGCGCGAGAAAGCCTTGTTGAGCGCCAGGTGCGCGAAGAGGCGTTGCGGCTGAGCCAGTTCGCCATCGATCAGAGCACCGTGGGTATCCTCTGGGTCAACTGGGACAGCCATGTGc                                                                    >  8:108951/1‑149 (MQ=255)                                                                            tCAGCAGCGCCAGCTGGAGCGCAGCCTGTTGGCCGCGCGAGAAAGCCTTGTTGAGCGCCAGGTGCGCGAAGAGGCGTTGCGGCTGAGCCAGTTCGCCATCGATCAGAGCACCGTGGGTATCCTCTGGGTCAACTGGGACAGCCATGTGc                                                                    <  2:205433/149‑1 (MQ=255)                                                                               gcagcGCCAGCTGGAGCGCAGCCTGTTGGCCGCGCGAGAAAGCCTTGTTGAGCGCCAGGTGCGCGAAGAGGCGTTGCGGCTGAGCCAGTTCGCCATCGATCAGAGCACCGTGGGTATCCTCTGGGTCAACTGGGACAGCCAt                                                                        <  4:112422/142‑1 (MQ=255)                                                                               gcagcGCCAGCTGGAGCGCAGCCTGTTGGCCGCGCGAGAAAGCCTTGTTGAGCGCCAGGTGCGCGAAGAGGCGTTGCGGCTGAGCCAGTTCGCCATCGATCAGAGCACCGTGGGTATCCTCTGGGTCAACTGGGACAGCCAt                                                                        >  3:112422/1‑142 (MQ=255)                                                                                  gcgcCAGCTGGAGCGCAGCCTGTTGGCCGCGCGAGAAAGCCTTGTTGAGCGCCAGGTGCGCGAAGAGGCGTTGCGGCTGAGCCAGTTCGCCATCGATCAGAGCACCGTGGGTATCCTCTGGGTCAACTGGGACAGCCATGTGCGTTACg                                                              >  1:216927/1‑149 (MQ=255)                                                                                  gcgcCAGCTGGAGCGCAGCCTGTTGGCCGCGCGAGAAAGCCTTGTTGAGCGCCAGGTGCGCGAAGAGGCGTTGCGGCTGAGCCAGTTCGCCATCGATCAGAGCACCGTGGGTATCCTCTGGGTCAACTGGGACAGCCATGTGCGTTACg                                                              >  2:70687/1‑149 (MQ=255)                                                                                     ccAGCTGGAGCGCAGCCTGTTGGCCGCGCGAGAAAGCCTTGTTGAGCGCCAGGTGCGCGAAGAGGCGTTGCGGCTGAGCCAGTTCGCCATCGATCAGAGCACCGTgg                                                                                                     <  1:244867/107‑1 (MQ=255)                                                                                     ccAGCTGGAGCGCAGCCTGTTGGCCGCGCGAGAAAGCCTTGTTGAGCGCCAGGTGCGCGAAGAGGCGTTGCGGCTGAGCCAGTTCGCCATCGATCAGAGCACCGTgg                                                                                                     >  2:244867/1‑107 (MQ=255)                                                                                          tGGAGCGCAGCCTGTTGGCCGCGCGAGAAAGCCTTGTTGAGCGCCAGGTGCGCGAAGAGGCGTTGCGGCTGAGCCAGTTCGCCATCGATCAGAGCACCGTGGGTATCCTCTGGGTCAACTGGGACa                                                                             >  8:156851/1‑126 (MQ=255)                                                                                          tGGAGCGCAGCCTGTTGGCCGCGCGAGAAAGCCTTGTTGAGCGCCAGGTGCGCGAAGAGGCGTTGCGGCTGAGCCAGTTCGCCATCGATCAGAGCACCGTGGGTATCCTCTGGGTCAACTGGGACa                                                                             <  7:156851/126‑1 (MQ=255)                                                                                                   gCCTGTTGGCCGCGCGAGAAAGCCTTGTTGAGCGCCAGGTGCGCGAAGAGGCGTTGCGGCTGAGCCAGTTCGCCATCGATCAGAGCACCGTGGGTATCCTCTGGGTCAACTGGGACAGCCATGTGCGTTACGCCAACCATGCCGCCGAg                                             <  7:154106/149‑1 (MQ=255)                                                                                                    ccTGTTGGCCGCGCGAGAAAGCCTTGTTGAGCGCCAGGTGCGCGAAGAGGCGTTGCGGCTGAGCCAGTTCGCCATCGATCAGAGCACCGTGGGTATc                                                                                                <  5:166960/97‑1 (MQ=255)                                                                                                    ccTGTTGGCCGCGCGAGAAAGCCTTGTTGAGCGCCAGGTGCGCGAAGAGGCGTTGCGGCTGAGCCAGTTCGCCATCGATCAGAGCACCGTGGGTATc                                                                                                >  6:166960/1‑97 (MQ=255)                                                                                                     cTGTTGGCCGCGCGAGAAAGCCTTGTTGAGCGCCAGGTGCGCGAAGAGGCGTTGCGGCTGAGCCAGTTCGCCATCGATCAGAGCACCGTGGGTATCCTCTGGGTCAACTGGGACAGCCATGTGCGTTACGCCAACCATGCCGCCGAgcg                                           <  5:203467/149‑1 (MQ=255)                                                                                                      tGTTGGCCGCGCGAGAAAGCCTTGTTGAGCGCCAGGTGCGCGAAGAGGCGTTGCGGCTGAGCCAGTTCGCCATCGATCAGAGCACCGTGGGTATCCTCTGGGTCAGCTGGGACAGCCATGTGCGTTACGCCAACCATGCCGCCGAgcg                                           >  3:62762/1‑148 (MQ=255)                                                                                                           gCCGCGCGAGAAAGCCTTGTTGAGCGCCAGGTGCGCGAAGAGGCGTTGCGGCTGAGCCAGTTCGCCATCGATCAGAGCACCGTGGGTATCCTCTGGGTCAACTGGGACAGCCATGTGCGTTACGCCAACCATGCCGCCGAGCGCATGtt                                     <  5:135646/149‑1 (MQ=255)                                                                                                            ccGCGCGAGAAAGCCTTGTTGAGCGCCAGGTGCGCGAAGAGGCGTTGCGGCTGAGCCAGTTCGCCCTCGATCAGAGCACCGTGGGTATCCTCTGGGTCAACTGGGACAGCCATGTGCGTTACGCCAACCATGCCGCCGAGCGCATGTTg                                    <  7:199306/149‑1 (MQ=255)                                                                                                             cgcgcgAGAAAGCCTTGTTGAGCGCCAGGTGCGCGAAGAGGCGTTGCGGCTGAGCCAGTTCGCCATCGATCAGAGCACCGTGGGTATCCTCTGGGTCAACTGGGACAGCCATTTGCGTTACGCCAACCATGCCGCCGAGCGCATGTTgg                                   >  4:244900/1‑149 (MQ=255)                                                                                                              gcgcgAGAAAGCCTTGTTGAGCGCCAGGTGCGCGAAGAGGCGTTGCGGCTGAGCCAGTTCGCCATCGATCAGAGCACCGTGGGTATCCTCTGGGTCAACTGGGACAGCCATGTGCGTTACGCCAACCATGCCGCCGAGCGCATGTTtgg                                  >  7:252969/1‑149 (MQ=255)                                                                                                              gcgcgAGAAAGCCTTGTTGAGCGCCAGGTGCGCGAAGAGGCGTTGCGGCTGAGCCAGTTCGCCATCGATCAGAGCACCGTGGGTATCCTCTGGGTCAACTGGGACAGCCATGTGCGTTACGCCAACCATGCCGCCGAGCGCATGTTggg                                  >  6:246858/1‑149 (MQ=255)                                                                                                                    gaAAGCCTTGTTGAGCGCCAGGTGCGCGAAGAGGCGTTGCGGCTGAGCCAGTTCGCCATCGATCAGAGCACCGTGGGTATCCTCTGGGTCAACTGGGACAGCCATGTGCGTTACGCCAACCATGCCGCCGAGCGCATGTTGGGCTACAg                            >  6:26937/1‑149 (MQ=255)                                                                                                                           ttgttgAGCGCCAGGTGCGCGAAGAGGCGTTGCGGCTGAGCCAGTTCGCCATCGATCAGAGCACCGTGGGTATCCTCTGGGTCAACTGGGACAGCCATGTGCGTTACGCCAACCATGCCGCCGAGCGCATGTTGGGCTACAGCGAAggg                     >  6:283831/1‑149 (MQ=255)                                                                                                                              ttgAGCGCCAGGTGCGCGAAGAGGCGTTGCGGCTGAGCCAGTTCGCCATCGATCAGAGCACCGTGGGTATCCTCTGGGTCAACTGGGACAGCCATGTGCGTTACGCCAACCATGCCGCCGAGCGCATGTTGGGCTACAGCGAAGGGGCg                  >  7:201281/1‑149 (MQ=255)                                                                                                                                gAGCGCCAGGTGCGCGAAGAGGCGTTGCGGCTGAGCCAGTTCGCCATCGATCAGAGCACCGTGGGTATCCTCTGGGTCAACTGGGACAGCCATGTGCGTTACGCCAACCATGCCGCCGAGCGCATGTTGGGCTACAGCGAAGGGGCGt                 <  1:70687/148‑1 (MQ=255)                                                                                                                                  gcgcCAGGTGCGCGAAGAGGCGTTGCGGCTGAGCCAGTTCGCCATCGATCAGAGCACCGTGGGTATCCTCTGGGTCAACTGGGACAGCCATGTGCGTTACGCCAACCATGCCGCCGAGCGCATGTTGGGCTACAGCGAAGGGGCGTTGc              <  4:219030/149‑1 (MQ=255)                                                                                                                                  gcgcCAGGTGCGCGAAGAGGCGTTGCGGCTGAGCCAGTTCGCCATCGATCAGAGCACCGTGGGTATCCTCTGGGTCAACTGGGACAGCCATGTGCGTTACGCCAACCATGCCGCCGAGCGCATGTTGGGCTACAGCGAAGGGGCGTTGc              <  3:87932/149‑1 (MQ=255)                                                                                                                                   cgcCAGGTGCGCGAAGAGGCGTTGCGGCTGAGCCAGTTCGCCATCGATCAGAGCACCGTGGGTATCCTCTGGGTCAACTGGGACAGCCATGTGCGTTACGCCAACCATGCCGCCGAGCGCATGTTGGGCTACAGCGAAGGGGCGTTGCt             >  8:32312/1‑149 (MQ=255)                                                                                                                                           gcgcGAAGAGGCGTTGCGGCTGAGCCAGTTCGCCATCGATCAGAGCACCGTGGGTATCCTCTGGGTCAACTGGGACAGCCATGTGCGTTACGCCAACCATGCCGCCGAGCGCATGTTGGGCTACAGCGAAGGGGCGTTGCTGGAGCGGc     >  1:61485/1‑149 (MQ=255)                                                                                                                                              cgAAGAggcgttgccacaccagcgtggccaaggcacacaacagcaacagaccgaacaacaaggccatgttctgccagaagcccggcgactcgctcaggcgcgggtatttcggctgcaaccagcgctgatgcagttgctccagctccttg  >  7:203743‑M2/1‑6 (MQ=255)                                                                                                                                              cgAAGAGGCGTTGCGGCTGAGCCAGTTCGCCATCGATCAGAGCACCGTGGGTATCCTCTGGGTCAACTGGGACAGCCATGTGCGTTACGCCAACCATGCCGCCGAGCGCATGTTGGGCTACAGCGAAGGGGCGTTGCTGGAg         >  2:39058/1‑142 (MQ=255)                                                                                                                                              cgAAGAGGCGTTGCGGCTGAGCCAGTTCGCCATCGATCAGAGCACCGTGGGTATCCTCTGGGTCAACTGGGACAGCCATGTGCGTTACGCCAACCATGCCGCCGAGCGCATGTTGGGCTACAGCGAAGGGGCGTTGCTGGAg         <  1:39058/142‑1 (MQ=255)                                                                                                                                               gAAGAGGCGTTGCGGCTGAGCCAGTTCGCCATCGATCAGAGCACCGTGGGTATCCTCTGGGTCAACTGGGACAGCCATGTGCGTTACGCCAACCATGCCGCCGAGCGCATGTTGGGCTACAGCGAAGGGGCGTTGCTGGAGCGGCCGc  >  7:131891/1‑148 (MQ=255)                                                                                                                                                   |                                                                                                                                                CTTCTGGCAGAACATGGCCTTGTTGTTCGGTCTGTTGCTGTTGTGTGCCTTGGCCACGCTGGTGTGGCAACGCCGTCAGCAGCGCCAGCTGGAGCGCAGCCTGTTGGCCGCGCGAGAAAGCCTTGTTGAGCGCCAGGTGCGCGAAGAGGCGTTGCGGCTGAGCCAGTTCGCCATCGATCAGAGCACCGTGGGTATCCTCTGGGTCAACTGGGACAGCCATGTGCGTTACGCCAACCATGCCGCCGAGCGCATGTTGGGCTACAGCGAAGGGGCGTTGCTGGAGCGGCCGC  >  NC_002947/496950‑497239

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.