New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 634613	75 (1.530)	4 (0.090)	4/246	NT	5.2%	coding (919/2016 nt)	PP_0546	sigma‑54 dependent transcriptional regulator
	?	NC_002947	= 634660	76 (1.660)					coding (966/2016 nt)	PP_0546	sigma‑54 dependent transcriptional regulator

CGTGCAGCCATGACGAAATGTTCAGCCGTGCCACGCCCGGCGGCAGTGCTGTCTGGCCGCTGCGCACCCTGGACGGTCGCCAGGTGTTCGCCAGCCTGCGGGGGCAGGCCCGGGCGCCGGTGT‑GGTCGGTGCCGGCCGCCCAGCCGCGGCCCGCAGGTGAAGTGGAGCCGCTGGTCTGTCTGCTTGACCCT‑GCGTTGCAAAATGATTTCCGCCGCAGCGTGCGGGTGTTCGAGCGCGATGTGCCATTGCTGCTGCGCGGCGAGACCGGCTGTGGCAAGGAAGCCTTCGCCCAGGC  >  NC_002947/634512‑634806                                                                                                                                                      |                                                                                                                                                    cgTGCAGCCATGACGAAATGTTCAGCCGTGCCACGCCCGGCGGCAGTGCTGTCTGGCCGCTGCGCACCCTGGACGGTCGCCAGGTGTTCGCCAGCCTGCGGGGGCAGGCCCGGGCGCCGGTGT‑GGTCGGTGCCGGCCGCCCAGCCGCgg                                                                                                                                                     <  6:228544/149‑1 (MQ=255)       gCCATGACGAAATGTTCAGCCGTGCCACGCCCGGCGGCAGTGCTGTCTGGCCGCTGCGCACCCTGGACGGTCGCCAGGTGTTCGCCAGCCTGCGGGGGCAGGCCCGGGCGCCGGTGT‑GGTCGGTGCCGGCCGCCCAGCCGCGGcccg                                                                                                                                                 <  7:115220‑M2/147‑5 (MQ=255)        ccATGACGAAATGTTCAGCCGTGCCACGCCCGGCGGCAGTGCTGTCTGGCCGCTGCGCACCCTGGACGGTCGCCAGGTGTTCGCCAGCCTGCGGGGGCAGGCCCGGGCGCCGGTGT‑GGTCGGTGCCGGCCGCCCAGCCGCGGcccgcag                                                                                                                                              >  8:17543‑M2/1‑142 (MQ=255)             aCGAAATGTTCAGCCGTGCCACGCCCGGCGGCAGTGCTGTCTGGCCGCTGCGCACCCTGGACGGTCGCCAGGTGTTCGCCAGCCTGCGGGGGCAGGCCCGGGCGCCGGTGT‑GGTCGGTGCCGGCCGCCCAGCCGCGGCCCGCAGGTg                                                                                                                                           >  7:42229/1‑147 (MQ=255)              cGAAATGTTCAGCCGTGCCACGCCCGGCGGCAGTGCTGTCTGGCCGCTGCGCACCCTGGACGGTCGCCAGGTGTTCGCCAGCCTGCGGGGGCAGGCCCGGGCGCCGGTGT‑GGTCGGTGCCGGCCGCCCAGCCGCGGCCCGCAGGTGAAg                                                                                                                                        >  5:141438/1‑149 (MQ=255)              cGAAATGTTCAGCCGTGCCACGCCCGGCGGCAGTGCTGTCTGGCCGCTGCGCACCCTGGACGGTCGCCAGGTGTTCGCCAGCCTGCGGGGGCAGGCCCGGGCGCCGGTGT‑GGTCGGTGCCGGCCGCCCAGCCGCGGCCCGCAGGTGAAg                                                                                                                                        >  8:199112/1‑149 (MQ=255)              cGAAATGTTCAGCCGTGCCACGCCCGGCGGCAGTGCTGTCTGGCCGCTGCGCACCCTGGACGGTCGCCAGGTGTTCGCCAGCCTGCGGGGGCAGGCCCGGGCGCCGGTGT‑GGTCGGTGCCGGCCGCCCAGCCGCGGCCCGCAGGTGAAg                                                                                                                                        >  7:283374/1‑149 (MQ=255)               gAAATGTTCAGCCGTGCCACGCCCGGCGGCAGTGCTGTCTGGCCGCTGCGCACCCTGGTCGGTCGCCAGGTGTTCGCCAGCCTGCGGGGGCAGGCCCGGGCGCCGGTGT‑GGTCGGTGCCGGCCGCCCAGCCGCGGCCCGCAGGTGAAGt                                                                                                                                       <  8:119236/149‑1 (MQ=255)               gAAATGTTCAGCCGTGCCACGCCCGGCGGCAGTGCTGTCTGGCCGCTGCGCACCCTGGACGGTCGCCAGGTGTTCGCCAGCCTGCGGGGGCAGGCCCGGGCGCCGGTGT‑GGTCGGTGCCGGCCGCCCAGCCGCGGCCCGCAGGTGAAGt                                                                                                                                       <  5:118537/149‑1 (MQ=255)               gAAATGTTCAGCCGTGCCACGCCCGGCGGCAGTGCTGTCTGGCCGCTGCGCACCCTGGACGGTCGCCAGGTGTTCGCCAGCCTGCGGGGGCAGGCCCGGGCGCCGGTGT‑GGTCGGTGCCGGCCGCCCAGCCGCGGCCCGCAGGTGAAGt                                                                                                                                       >  1:19902/1‑149 (MQ=255)               gAAATGTTCAGCCGTGCCACGCCCGGCGGCAGTGCTGTCTGGCCGCTGCGCACCCTGGACGGTCGCCAGGTGTTCGCCAGCCTGCGGGGGCAGGCCCGGGCGCCGGTGT‑GGTCGGTGCCGGCCGCCCAGCCGCGGCCCGCAGGTGAAGt                                                                                                                                       <  8:115220/149‑1 (MQ=255)                aaaTGTTCAGCCGTGCCACGCCCGGCGGCAGTGCTGTCTGGCCGCTGCGCACCCTGGACGGTCGCCAGGTGTTCGCCAGCCTGCGGGGGCAGGCCCGGGCGCCGGTGT‑GGTCGGTGCCGGCCGCCCAGCCGCGGCCCGCAGGTGAAGTg                                                                                                                                      >  3:190255/1‑149 (MQ=255)                  aTGTTCAGCCGTGCCACGCCCGGCGGCAGTGCTGTCTGGCCGCTGCGCACCCTGGACGGTCGCCAGGTGTTCGCCAGCCTGCGGGGGCAGGCCCGGGCGCCGGTGT‑GGTCGGTGCCGGCCGCCCAGCCGCGGCCCGCAGGTGAAGTGGa                                                                                                                                    <  2:220751/149‑1 (MQ=255)                    gTTCAGCCGTGCCACGCCCGGCGGCAGTGCTGTCTGGCCGCTGCGCACCCTGGACGGTCGCCAGGTGTTCGCCAGCCTGCGGGGGCAGGCCCGGGCGCCGGTGT‑GGTCGGTGCCGGCCGCCCAGCCGCGGCCCGCAGGTGAAGTGGAGc                                                                                                                                  >  1:57685/1‑149 (MQ=255)                     ttCAGCCGTGCCACGCCCGGCGGCAGTGCTGTCTGGCCGCTGCGCACCCTGGACGGTCGCCAGGTGTTCGCCAGCCTGCGGGGGCAGGCCCGGGCGCCGGTGT‑GGTCGGTGCCGGCCGCCCAGCCGCGGCCCGCAGGTGAAGTGGAGcc                                                                                                                                 >  5:188865/1‑149 (MQ=255)                     ttCAGCCGTGCCACGCCCGGCGGCAGTGCTGTCTGGCCGCTGCGCACCCTGGACGGTCGCCAGGTGTTCGCCAGCCTGCGGGGGCAGGCCCGGGCGCCGGTGT‑GGTCGGTGCCGGCCGCCCAGCCGCGGCCCGCAGGTGAAGTGGAGcc                                                                                                                                 >  5:198076/1‑149 (MQ=255)                         gCCGTGCCACGCCCGGCGGCAGTGCTGTCTGGCCGCTGCGCACCCTGGACGGTCGCCAGGTGTTCGCCAGCCTGCGGGGGCAGGCCCGGGCGCCGGTGT‑GGTCGGTGCCGGCCGCCCAGCCGCGGCCCGCAGGTGAAGTGGAGCCGCTg                                                                                                                             >  1:35918/1‑149 (MQ=255)                           cGTGCCACGCCCGGCGGCAGTGCTGTCTGGCCGCTGCGCACCCTGGACGGTCGCCAGGTGTTCGCCAGCCTGCGGGGGCAGGCCCGGGCGCCGGTGT‑GGTCGGTGCCGGCCGCCCACCCGCCGCCCGCAGGTCAAGTGGAGCCGCTGgt                                                                                                                           >  8:147668/1‑149 (MQ=255)                             tGCCACGCCCGGCGGCAGTGCTGTCTGGCCGCTGCGCACCCTGGACGGTCGCCAGGTGTTCGCCAGCCTGCGGGGGCAGGCCCGGGCGCCGGTGT‑GGTCGGTGCCGGCCGCCCAGCCGCGGCCCGCAGGTGAAGTGGAGCCGCTGgtct                                                                                                                         <  6:198076/149‑1 (MQ=255)                                cACGCCGGGCGTCAGGGCTGTCTGGCCGCTGCGCACGCTGGACGGTGGCCAGGTGTTCGCCAGCCTGCGGGGGCAGGCCCGGGCGCCGGTGT‑GGTCGGTGCCGGCCGCCCAGCCGCGGCCCGCAGGTGAAGTGGAGCCGCTGgtctgtc                                                                                                                      <  7:147668/149‑1 (MQ=255)                                cACGCCCGGCGGCAGTGCTGTCTGGCCGCTGCGCACCCTGGACGGTCGCCAGGTGTTCGCCAGCCTGCGGGGGCAGGCCCGGGCGCCGGTGT‑GGTCGGTGCCGGCCGCCCAGCCGCGGCCCGCAGGTGAAGTGGAGCCGCTGgtctgtc                                                                                                                      <  2:19902/149‑1 (MQ=255)                                cACGCCCGGCGGCAGTGCTGTCTGGCCGCTGCGCACCCTGGACGGTCGCCAGGTGTTCGCCAGCCTGCGGGGGCAGGCCCGGGCGCCGGTGT‑GGTCGGTGCCGGCCGCCCAGCCGCGGCCCGCAGGTGAAGTGGAGCCGCTGgtctgtc                                                                                                                      >  2:143818/1‑149 (MQ=255)                                  cGCCCGGCGGCAGTGCTGTCTGGCCGCTGCGCACCCTGGACGGTCGCCAGGTGTTCGCCAGCCTGCGGGGGCAGGCCCGGGCGCCGGTGT‑GGTCGGTGCCGGCCGCCCAGCCGCGGCCCGCAGGTGAAGTGGAGCCGCTGGtctgtctg                                                                                                                    <  3:85165/149‑1 (MQ=255)                                   gCCCGGCGGCAGTGCTGTCTGGCCGCTGCGCACCCTGGACGGTCGCCAGGTGTTCGCCAGCCTGCGGGGGCAGGCCCGGGCGCCGGTGT‑GGTCGGTGCCGGCCGCCCAGCCGCGGCCCGCAGGTGAAGTGGAGCCGCTGGTCTGTCTGc                                                                                                                   <  2:157658/149‑1 (MQ=255)                                   gCCCGGCGGCAGTGCTGTCTGGCCGCTGCGCACCCTGGACGGTCGCCAGGTGTTCGCCAGCCTGCGGGGGCAGGCCCGGGCGCCGGTGT‑GGTCGGTGCCGGCCGCCCAGCCGCGGCCCGCAGGTGAAGTGGAGCCGCTGGTCTGTCTGc                                                                                                                   <  6:141438/149‑1 (MQ=255)                                         cggcAGTGCTGTCTGGCCGCTGCGCACCCTGGACGGTCGCCAGGTGTTCGCCAGCCTGCGGGGGCAGGCCCGGGCGCCGGTGT‑GGTCGGTGCCGGCCGCCCAGCCGCGGCCCGCAGGTGAAGTGGAGCCGCTGGTCTGTCTGCTTGAcc                                                                                                             <  4:216083/149‑1 (MQ=255)                                          ggcAGTGCTGTCTGGCCGCTGCGCACCCTGGACGGTCGCCAGGTGTTCGCCAGCCTGCGGGGGCAGGCCCGGGCGCCGGTGT‑GGTCGGTGCCGGCCGCCCAGCCGCGGCCCGCAGGTGAAGTGGAGCCGCTGGTCTGTCTGCTTGAccc                                                                                                            >  5:123941/1‑149 (MQ=255)                                              gTGCTGTCTGGCCGCTGCGCACCCTGGACGGTCGCCAGGTGTTCGCCAGCCTGCGGGGGCAGGCCCGGGCGCCGGTGT‑GGTCGGTGCCGGCCGCCCAGCCGCGGCCCGCAGGTGAAGTGGAGCCGCTGGTCTGTCTGCTTGACCCT‑GCg                                                                                                       >  5:294195/1‑149 (MQ=255)                                                  tGTCTGGCCGCTGCGCACCCTGGACGGTCGCCAGGTGTTCGCCAGCCTGCGGGGGCAGGCCCGGGCGCCGGTGT‑GGTCGGTGCCGGCCGCCCAGCCGCGGCCCGCAGGTGAAGTGGAGCCGCTGGTCTGTCTGCTTGACCCT‑GCGTTg                                                                                                    >  2:150926/1‑148 (MQ=255)                                                    tCTGGCCGCTGCGCACCCTGGACGGTCGCCAGGTGTTCGCCAGCCTGCGGGGGCAGGCCCGGGCGCCGGTGT‑GGTCGGTGCCGGCCGCCCAGCCGCGGCCCGCAGGTGAAGTGGAGCCGCTGGTCTGTCTGCTTAACCCT‑GCGTTGc                                                                                                   <  8:42229/147‑1 (MQ=255)                                                      tGGCCGCTGCGCACCCTGGACGGTCGCCAGGTGTTCGCCAGCCTGCGGGGGCAGGCCCGGGCGCCGGTGT‑GGTCGGTGCCGGCCGCCCAGCCGCGGCCCGCAGGTGAAGTGGAGCCGCTGGTCTGTCTGCTTGACCCT‑GCGTTGCaaaa                                                                                               >  8:257155/1‑149 (MQ=255)                                                        gCCGCTGCGCACCCTGGACGGTCGCCAGGTGTTCGCCAGCCTGCGGGGGCAGGCCCGGGCGCCGGTGT‑GGTCGGTGCCGGCCGCCCAGCCGCGGCCCGCAGGTGAAGTGGAGCCGCTGGTCTGTCTGCTTGACCCT‑GCGTTGCAAAAt                                                                                              <  6:121756/148‑1 (MQ=255)                                                          cGCTGCGCACCCTGGACGGTCGCCAGGTGTTCGCCAGCCTGCGGGGGCAGGCCCGGGCGCCGGTGT‑GGTCGGTGCCGGCCGCCCAGCCGCGGCCCGCAGGTGAAGTGGAGCCGCTGGTCTGTCTGCTTGACCCT‑GCGTTGCAAAATGAt                                                                                           >  8:14089/1‑149 (MQ=255)                                                               cgcACCCTGGACGGTCGCCAGGTGTTCGCCAGCCTGCGGGGGCAGGCCCGGGCGCCGGTGT‑GGTCGGTGCCGGCCGCCCAGCCGCGGCCCGCAGGTGAAGTGGAGCCGCTGGTCTGTCTGCTTGACCCT‑GCGTTGCAAAATGATTTccg                                                                                      >  2:101126/1‑149 (MQ=255)                                                                 cACCCTGGACGGTCGCCAGGTGTTCGCCAGCCTGCGGGGGCAGGCCCGGGCGCCGGTGT‑GGTCGGTGCCGGCCGCCCAGCCGCGGCCCGCAGGTGAAGTGGAGCCGCTGGTCTGTCTGCTTGACCCT‑GCGTTGCAAAATGATTTccgcc                                                                                    <  4:190255/149‑1 (MQ=255)                                                                    ccTGGACGGTCGCCAGGTGTTCGCCAGCCTGCGGGGGCAGGCCCGGGCGCCGGTGT‑GGTCGGTGCCGGCCGCCCAGCCGCGGCCCGCAGGTGAAGTGGAGCCGCTGGTCTGTCTGCTTGACCCT‑GCGTTGCAAAATGATTTccgccg                                                                                   >  5:172831/1‑147 (MQ=255)                                                                    ccTGGACGGTCGCCAGGTGTTCGCCAGCCTGCGGGGGCAGGCCCGGGCGCCGGTGT‑GGTCGGTGCCGGCCGCCCAGCCGCGGCCCGCAGGTGAAGTGGAGCCGCTGGTCTGTCTGCTTGACCCT‑GCGTTGCAAAATGATTTccgccg                                                                                   >  4:233663/1‑147 (MQ=255)                                                                    ccTGGACGGTCGCCAGGTGTTCGCCAGCCTGCGGGGGCAGGCCCGGGCGCCGGTGT‑GGTCGGTGCCGGCCGCCCAGCCGCGGCCCGCAGGTGAAGTGGAGCCGCTGGTCTGTCTGCTTGACCCT‑GCGTTGCAAAATGATTTCCGCCGCa                                                                                 >  5:177089/1‑149 (MQ=255)                                                                        gACGGTCGCCAGGTGTTCGCCAGCCTGCAGGGGCAGGCCCGGGCGCCGGTGT‑GGTCGGTGCCGGCCGCCCAGCCGCGGCCCGCAGGTGAAGTGGAGCCGCTGGTCTGTCTGCTTGACCCT‑GCGTTGCAAAATGATTTCCGCCGCAGCGt                                                                             >  4:178897/1‑149 (MQ=255)                                                                         aCGGTCGCCAGGTGTTCGCCAGCCTGCGGGGGCAGGCCCGGGCGCCGGTGT‑GGTCGGTGCCGGCCGCCCAGCCGCGGCCCGCAGGTGAAGTGGAGCCGCTGGTCTGTCTGCTTGACCCT‑GCGTTGCAAAATGATTTCCGCCGCAGCGTg                                                                            <  6:188865/149‑1 (MQ=255)                                                                          cGGTCGCCAGGTGTTCGCCAGCCTGCGGGGGCAGGCCCGGGCGCCGGTGT‑GGTCGGTGCCGGCCGCCCAGCCGCGGCCCGCAGGTGAAGTGGAGCCGCTGGTCTGTCTGCTTGACCCT‑GCGTTGCAAAATGATTTCCGCCGCAGCGTGc                                                                           >  8:9649/1‑149 (MQ=255)                                                                            gTCGCCAGGTGTTCGCCAGCCTGCGGGGGCAGGCCCGGGCGCCGGTGT‑GGTCGGTGCCGGCCGCCCAGCCGCGGCCCGCAGGTGAAGTGGAGCCGCTGGTCTGTCTGCTTGACCCT‑GCGTTGCAAAATGATTTCCGCCGCAGCGTGCgg                                                                         <  2:254312/149‑1 (MQ=255)                                                                                 cAGGTGTTCGCCAGCCTGCGGGGGCAGGCCCGGGCGCCGGTGTGGGTCGGTGCCGGCCGCCCAGCCGCGGCCCGCAGGTGAAGTGGAGCCGCTGGTCTGTCTGCTTGACCCT‑GCGTTGCAAAATGATTTCCGCCGCAGCGTGCGGgtgt                                                                     >  1:63049/1‑149 (MQ=255)                                                                                 cAGGTGTTCGCCAGCCTGCGGGGGCAGGCCCGGGCGCCGGTGT‑GGTCGGTGCCGGCCGCCCAGCCGCGGCCCGCAGGTGAAGTGGAGCCGCTGGTCTGTCTGCTTGACCCT‑GCGTTGCAAAATGATTTCCGCCGCAGCGTGCGGGTGtt                                                                    <  1:214807/149‑1 (MQ=255)                                                                                           ccAGCCTGCGGGGGCAGGCCCGGGCGCCGGTGT‑GGTCGGTGCCGGCCGCCCAGCCGCGGCCCGCAGGTGAAGTGGAGCCGCTGGTCTGTCTGCTTGACCCT‑GCGTTGCAAAATGATTTccgcc                                                                                    <  4:164464/123‑1 (MQ=255)                                                                                           ccAGCCTGCGGGGGCAGGCCCGGGCGCCGGTGT‑GGTCGGTGCCGGCCGCCCAGCCGCGGCCCGCAGGTGAAGTGGAGCCGCTGGTCTGTCTGCTTGACCCT‑GCGTTGCAAAATGATTTccgcc                                                                                    >  3:164464/1‑123 (MQ=255)                                                                                             aGCCTGCGGGGGCAGGCCCGGGCGCCGGTGT‑GGTCGGTGCCGGCCGCCCAGCCGCGGCCCGCAGGTGAAGTGGAGCCGCTGGTCTGTCTGCTTGACCCT‑GCGTTGCAAAATGATTTCCGCCGCAGCGTGCGGGTGTTCGAGCGCGAtgt                                                        <  3:233663/149‑1 (MQ=255)                                                                                              gCCTGCGGGGGCAGGCCCGGGCGCCGGTGT‑GGTCGGTGCCGGCCGCCCAGCCGCGGcccgcaggctggcgaacacctggcgaccgtccagggtgcgcagcggccagacagcactgccgccgggcgtggcacggctgaacatttcgtcat                                                        >  7:121099‑M2/1‑56 (MQ=255)                                                                                              gCCTGCGGGGGCAGGCCCGGGCGCCGGTGT‑GGTCGGTGCCGGCCGCCCAGCCGCGGcccgcaggctggcgaacacctggcgaccgtccagggtgcgcagcggccagacagcactgccgccgggcgtggcacggctgaacatttcgtcat                                                        <  8:121099‑M2/149‑94 (MQ=255)                                                                                              gCCTGCGGGGGCAGGCCCGGGCGCCGGTGT‑GGTCGGTGCCGGCCGCCCAGCCGCGGCCCGCAGGTGAAGTGGAGCCGCTGGTCTGTCTGCTTGACCCT‑GCGTTGCAAAATGATTTCCGCCGCAGCGTGCGGGTGTTCGAGCGCGAtgtg                                                       >  5:68289/1‑149 (MQ=255)                                                                                               ccTGCGGGGGCAGGCCCGGGCGCCGGTGT‑GGTCGGTGCCGGCCGCCCAGCCGCGGcccgcaggctggcgaacacctggcgaccgtccagggtgcgcagcggccagacagcactgccgccgggcgtggcacggctgaa                                                                   >  7:133753‑M2/1‑55 (MQ=255)                                                                                               ccTGCGGGGGCAGGCCCGGGCGCCGGTGT‑GGTCGGTGCCGGCCGCCCAGCCGCGGcccgcaggctggcgaacacctggcgaccgtccagggtgcgcagcggccagacagcactgccgccgggcgtggcacggctgaa                                                                   <  8:133753‑M2/137‑83 (MQ=255)                                                                                                cTGCGGGGGCAGGCCCGGGCGCCGGTGT‑GGTCGGTGCCGGCCGCCCAGCCGCGGCCCTCAGGTGAAGTGGAGCCGCTGGTCTGTCTGCTTGACCCT‑GCGTTGCAAAATGATTTCCGCCGCAGCGTGCGGGTGTTCGAGCGCGATGTGc                                                      >  7:208719/1‑148 (MQ=255)                                                                                                   cGGGGGCAGGCCCGGGCGCCGGTGT‑GGTCGGTGCCGGCCGCCCAGCCGCGGCCCGCAGGTGAAGTGGAGCCGCTGGTCTGTCTGCTTGACCCT‑GCGTTGCAAAATGATTTCCGCCGCAGCGTGCGGGTGTTCGAGCGCGATGTGCCAt                                                   <  6:294195/148‑1 (MQ=255)                                                                                                      gggCAGGCCCGGGCGCCGGTGT‑GGTCGGTGCCGGCCGCCCAGCCGCGGCCCGCAGGTGAAGTGGAGCCGCTGGTCTGTCTGCTTGACCCT‑GCGTTGCAAAATGATTTCCGCCGCAGCGTGCGGGTGTTCGAGCGCGATGTGCCATtgct                                               >  2:32284/1‑149 (MQ=255)                                                                                                        gCAGGCCCGGGCGCCGGTGT‑GGTCGGTGCCGGCCGCCCAGCCGCGGCCCGCAGGTGAAGTGGAGCCGCTGGTCTGTCTGCTTGACCCT‑GCGTTGCAAAATGATTTCCGCCGCAGCGTGCGGGTGTTCGAGCGCGATGTGCCATtgctgc                                             >  6:257259/1‑149 (MQ=255)                                                                                                        gCAGGCCCGGGCGCCGGTGT‑GGTCGGTGCCGGCCGCCCAGCCGCGGCCCGCAGGTGAAGTGGAGCCGCTGGTCTCTCTGCTTGACCCT‑GCGTTGCAAAATGATTTCCGCCGCAGCGTGCGGGTGTTCGAGCGCGATGAGCCATtgctgc                                             >  7:158238/1‑149 (MQ=255)                                                                                                         cAGGCCCGGGCGCCGGTGT‑GGTCGGTGCCGGCCGCCCAGCCGCGGCCCGCAGGTGAAGTGGAGCCGCTGGTCTGTCTGCTTGACCCT‑GCGTTGCAAAATGATTTCCGCCGCAGCGTGCGGGTGTTCGAGCGCGATGTGCCATtgctgct                                            >  1:302960/1‑149 (MQ=255)                                                                                                          aGGCCCGGGCGCCGGTGT‑GGTCGGTGCCGGCCGCCCAGCCGCGGCCCGCAGGTGAAGTGGAGCCGCTGGTCTGTCTGCTTGACCCT‑GCGTTGCAAAATGATTTCCGCCGCAGCGTGCGGGTGTTCGAGCGCGATGTGCCATtgctgctg                                           >  3:257368/1‑149 (MQ=255)                                                                                                          aGGCCCGGGCGCCGGTGT‑GGTCGGTGCCGGCCGCCCAGCCGCGGCCCGCAGGTGAAGTGGAGCCGCTGGTCTGTCTGCTTGACCCT‑GCGTTGCAAAATGATTTCCGCCGCAGCGTGCGGGTGTTCGAGCGCGATGTGCCATtgctgctg                                           >  1:135542/1‑149 (MQ=255)                                                                                                             cccGGGCGCCGGTGT‑GGTCGGTGCCGGCCGCCCAGCCGCGGCCCGCAGGTGAAGTGGAGCCGCTGGTCTGTCTGCTTGACCCT‑GCGTTGCAAAATGATTTCCGCCGCAGCGTGCGGGTGTTCGAGCGCGATGTGCCATTGCTGCTgcgc                                        <  7:14089/149‑1 (MQ=255)                                                                                                                   cgcCGGTGT‑GGTCGGTGCCGGCCGCCCAGCCGCGGCCCGCAGGTGAAGTGGAGCCGCTGGTCTGTCTGCTTGACCCT‑GCGTTGCAAAATGATTTCCGCCGCAGCGTGCGGGTGTTCGAGCGCGATGTGCCATTGCTGCTGCGCGGCgag                                  <  2:57685/149‑1 (MQ=255)                                                                                                                    gcCGGTGT‑GGTCGGTGCCGGCCGCCCAGCCGCGGCCCGCAGGTGAAGTGGAGCCGCTGGTCTGTCTGCTTGACCCT‑GCGTTGCAAAATGATTTCCGCCGCAGCGTGCGGGTGTTCGAGCGCGATGTGCCATTGCTGCTGCGCGGCgaga                                 <  6:177089/149‑1 (MQ=255)                                                                                                                    gcCGGTGG‑GGTCGGTGCCGGCCGCCCAGCCGCGGCCCGCAGGTGAAGTGGAGCCGCTGGTCTGTCTGCTTGACCCT‑GCGTTGCAAAATGATTTCCGCCGCAGCGTGCGGGTGTTCGAGCGCGATGTGCCATTGCTGCTGCGCGGCgaga                                 <  6:172831/149‑1 (MQ=255)                                                                                                                      cGGTGT‑GGTCGGTGCCGGCCGCCCAGCCGCGGCCCGCAGGTGAAGTGGAGCCGCTGGTCTGTCTGCTTGACCCT‑GCGTTGCAAAATGATTTCCGCCGCAGCGTGCGGGTGTTCGAGCGCGATGTGCCATTGCTGCTGCGCGGCGAGAcc                               <  1:150926/149‑1 (MQ=255)                                                                                                                        gtgt‑GGTCGGTGCCGGCCGCCCAGCCGCGGCCCGCAGGTGAAGTGGAGCCGCTGGTCTGTCTGCTTGACCCT‑GCGTTGCAAAATGATTTCCGCCGCAGCGTGCGGGTGTTCGAGCGCGATGTGCCATTGCTGCTGCGCGGCGAGACCgg                             >  1:176096/1‑149 (MQ=255)                                                                                                                         tgt‑gGTCGGTGCCGGCCGCCCAGCCGCGGCCCGCAGGTGAAGTGGAGCCGCTGGTCTGTCTGCTTGACCCT‑GCGTTGCAAAATGATTTCCGCCGCAGCGTGCGGGTGTTCGAGCGCGATGTGCCATTGCTGCTGCGCGGCGAGACCGGc                            <  6:123941/149‑1 (MQ=255)                                                                                                                             ggTCGGTGCCGGCCGCCCAGCCGCGGCCCGCAGGTGAAGTGGAGCCGCTGGGCTGTCTGCTTGACACT‑GCGGTGCAAAATGATTTACGCCGCAGCGTGCGGGTGTTCGAGCGCGATGTGCCATTGCTGCTGCGCGGCGAGACCGGCtgt                         <  7:199112/149‑1 (MQ=255)                                                                                                                              gTCGGTGCCGGCCGCCCAGCCGCGGCCCGCAGGTGAAGTGGAGCCGCTGGTCTGTCTGCTTGACCCT‑GCGTTGCAAAATGATTTCCGCCGCAGCGTGCGGGTGTTCGAGCGCGATGTGCCATTGCTGCTGCGCGGCGAGACCGGCtgt                         <  1:32284/148‑1 (MQ=255)                                                                                                                              gTCGGTGCCGGCCGCCCAGCCGCGGCCCGCAGGTGAAGTGGAGCCGCTGGTCTGTCTGCTTGACCCT‑GCGTTGCAAAATGATTTCCGCCGCAGCGTGCGGGTGTTCGAGCGCGATGTGCCATTGCTGCTGCGCGGCGAGACCGGCtgt                         <  4:257368/148‑1 (MQ=255)                                                                                                                               tCGGTGCCGGCCGCCCAGCCGCGGCCCGCAGGTGAAGTGGAGCCGCTGGTCTGTCTGCTTGACCCT‑GCGTTGCAAAATGATTTCCGCCGCAGCGTGCGGGTGTTCGAGCGCGATGTGCCATTGCTGCTGCGCGGCGAGACCGGCTGTgg                       <  6:68289/149‑1 (MQ=255)                                                                                                                               tCGGTGCCGGCCGCCCAGCCGCGGCCCGCAGGTGAAGTGGAGCCGCTGGTCTGTCTGCTTGACCCT‑GCGTTGCAAAATGATTTCCGCCGCAGCGTGCGGGTGTTCGAGCGCGATGTGCCATTGCTGCTGCGCGGCGAGACCGGCTGTgg                       <  2:302960/149‑1 (MQ=255)                                                                                                                                  gTGCCGGCCGCCCAGCCGCGGCCCGCAGGTGAAGTGGAGCCGCTGGTCTGTCTGCTTGACCCTAGCGTTGCAAAATGATTTCCGCCGCAGCGTGCGGGTGTTCGAGCGCGATGTGCCATTGCTGCTGCGCGGCGAGCCCGGCTGTGGc                      >  1:91267/1‑148 (MQ=255)                                                                                                                                  gTGCCGGCCGCCCAGCCGCGGCCCGCAGGTGAAGTGGAGCCGCTGGTCTGTCTGCTTGACCCT‑GCGTTGCAAAATGATTTCCGCCGCAGCGTGCGGGTGTTCGAGCGCGATGTGCCATTGCTGCTGCGCGGCGAGACCGGCTGTGGCaa                    <  2:135542/149‑1 (MQ=255)                                                                                                                                  gTGCCGGCCGCCCAGCCGCGGCCCGCAGGTGAAGTGGAGCCGCTGGTCTGTCTGCTTGACCCT‑GCGTTGCAAAATGATTTCCGCCGCAGCGTGCGGGTGTTCGAGCGCGATGTGCCATTGCTGCTGCGCGGCGAGACCGGCTGTGGCaa                    <  5:152941/149‑1 (MQ=255)                                                                                                                                      cggccgCCCAGCCGCGGCCCGCAGGTGAAGTGGAGCCGCTGGTCTGTCTGCTTGACCCT‑GCGTTGCAAAATGATTTCCGCCGCAGCGTGCGGGTGTTCGAGCGCGATGTGCCATTGCTGCTGCGCGGCGAGACCGGCTGTGGCAAgg                  >  7:261283/1‑147 (MQ=255)                                                                                                                                      cggccgCCCAGCCGCGGCCCGCAGGTGAAGTGGAGCCGCTGGTCTGTCTGCTTGACCCT‑GCGTTGCAAAATGATTTCCGCCGCAGCGTGCGGGTGTTCGAGCGCGATGTGCCATTGCTGCTGCGCGGCGAGACCGGCTGTGGCAAGGaa                <  2:176096/149‑1 (MQ=255)                                                                                                                                       ggccgCCCAGCCGCGGCCCGCAGGTGAAGTGGAGCCGCTGGTCTGTCTGCTTGACCCT‑GCGTTGCAAAATGATTTCCGCCGCAGCGTGCGGGTGTTCGAGCGCGATGTGCCATTGCTGCTGCGCGGCGAGACCGGCTGTGGCAAGGAAg               <  2:35918/149‑1 (MQ=255)                                                                                                                                          cgccCAGCCGCGGCCCGCAGGTGAAGTGGAGCCGCTGGTCTGTCTGCTTGACCCT‑GCGTTGCAAAATGATTTCCGCCGCAGCGTGCGGGTGTTCGAGCGCGATGTGCCATTGCTGCTGCGCGGCGAGACCGGCTGTGGCAAGGAAGCCt            >  8:282055/1‑149 (MQ=255)                                                                                                                                           gccCAGCCGCGGCCCGCAGGTGAAGTGGAGCCGCTGGTCTGTCTGCTTGACCCT‑GCGTTGCAAAATGATTTCCGCCGCAGCGTGCGGGTGTTCGAGCGCGATGTGCCATTGCTGCTGCGCGGCGAGACCGGCTGTGGCAAGGCAGCCtt           >  7:141332/1‑149 (MQ=255)                                                                                                                                           gccCAGCCGCGGCCCGCAGGTGAAGTGGAGCCGCTGGTCTGTCTGCTTGACCCT‑GCGTTGCAAAATGATTTCCGCCGCAGAGTGCGGGTGTTCGAGCGCGATGTGCCATTGCTGCTGCGCGGCGAGCCCTGATGTGGCAAGGAAGcag            >  8:281762/1‑146 (MQ=255)                                                                                                                                            cccAGCCGCGGCCCGCAGGTGAAGTGGAGCCGCTGGTCTGTCTGCTTGACCCT‑GCGTTGCAAAATGATTTCCGCCGCAGCGTGCGGGTGTTCGAGCGCGATGTGCCATTGCTGCTGCGCGGCGAGACCGGCTGTGGCAAGGAAGCCTTc          <  1:101126/149‑1 (MQ=255)                                                                                                                                            cccAGCCGCGGCCCGCAGGTGAAGTGGAGCCGCTGGTCTGTCTGCTTGACCCT‑GCGTTGCAAAATGATTTCCGCCGCAGCGTGCGGGTGTTCGAGCGCGATGTGCCATTGCTGCTGCGCGGCGAGACCGGCTGTGGCAAGGAAGCCTTc          >  1:295645/1‑149 (MQ=255)                                                                                                                                             ccAGCCGCGGCCCGCAGGTGAAGTGGAGCCGCTGGTCTGTCTGCTTGACCCT‑GCGTTGCAAAATGATTTCCGCCGCAGCGTGCGGGTGTTCGAGCGCGATGTGCCATTGCTGCTGCGCGGCGAGACCGGCTGTGGCAAGGAAGCCTTCg         >  5:194060/1‑149 (MQ=255)                                                                                                                                              cAGCCGCGGCCCGCAGGTGAAGTGGAGCCGCTGGTCTGTCTGCTTGACCCT‑GCGTTGCAAAATGATTTCCGCCGCAGCGTGCGGGTGTTCGAGCGCGATGTGCCATTGCTGCTGCGCGGCGAGACCGGCTGTGGCAAGGAAGCCTTCGc        <  3:178897/149‑1 (MQ=255)                                                                                                                                               aGCCGCGGCCCGCAGGTGAAGTGGAGCCGCTGGTCTGTCTGCTTGACCCT‑GCGTTGCAAAATGATTTCCGCCGCAGCGTGCGGGTGTTCGAGCGCGATGTGCCATTGCTGCTGCGCGGCGAGACCGGCTGTGGCAAGGAAGCCTTCGcc       >  2:174986/1‑149 (MQ=255)                                                                                                                                                 ccGCGGCCCGCAGGTGAAGTGGAGCCGCTGGTCTGTCTGCTTGACCCT‑GCGTTGCAAAATGATTTCCGCCGCAGCGTGCGGGTGTTCGAGCGCGATGTGCCATTGCTGCTGCGCGGCGAGACCGGCTGTGGCAAGGAAGCCTTCGcc       >  5:24564/1‑147 (MQ=255)                                                                                                                                                  cgcgGCCCGCAGGTGAAGTGGAGCCGCTGGTCTGTCTGCTTGACCCT‑GCGTTGCAAAATGATTTCCGCCGCAGCGTGCGGGTGTTCGAGCGCGATGTGCCATTGCTGCTGCGCGGCGAGACCGGCTGTGGCAAGGAAGCCTTCGCCCAg    <  6:194060/149‑1 (MQ=255)                                                                                                                                                   gcgGCCCGCAGGTGAAGTGGAGCCGCTGGTCTGTCTGCTTGACCCT‑GCGTTGCAAAATGATTTCCGCCGCAGCGTGCGGGTGTTCGAGCGCGATGTGCCATTGCTGCTGCGCGGCGAGACCGGCTGTGGCAAGGAAGCCTTCGCCCAgg   <  2:63049/149‑1 (MQ=255)                                                                                                                                                   gcgGCCCGCAGGTGAAGTGGAGCCGCTGGTCTGTCTGCTTGACCCT‑GCGTTGCAAAATGATTTCCGCCGCAGCGTGCGGGTGTTCGAGCGCGATGTGCCATTGCTGCTGCGCGGCGAGACCGGCTGTGGCAAGGAAGCCTTCGCCCAgg   <  8:283374/149‑1 (MQ=255)                                                                                                                                                    cgGCCCGCAGGTGAAGTGGAGCCGCTGGTCTGTCTGCTTGACCCT‑GCGTTGCAAAATGATTTCCGCCGCAGCGTGCGGGTGTTCGAGCGCGATGTGCCATTGCTGCTGCGCGGCGAGACCGGCTGTGGCAAGGAAGCCTTCGCCCAGGc  >  5:107137/1‑149 (MQ=255)                                                                                                                                                      |                                                                                                                                                    CGTGCAGCCATGACGAAATGTTCAGCCGTGCCACGCCCGGCGGCAGTGCTGTCTGGCCGCTGCGCACCCTGGACGGTCGCCAGGTGTTCGCCAGCCTGCGGGGGCAGGCCCGGGCGCCGGTGT‑GGTCGGTGCCGGCCGCCCAGCCGCGGCCCGCAGGTGAAGTGGAGCCGCTGGTCTGTCTGCTTGACCCT‑GCGTTGCAAAATGATTTCCGCCGCAGCGTGCGGGTGTTCGAGCGCGATGTGCCATTGCTGCTGCGCGGCGAGACCGGCTGTGGCAAGGAAGCCTTCGCCCAGGC  >  NC_002947/634512‑634806

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.