New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 2377876	52 (1.060)	3 (0.070)	3/246	NT	5.5%	coding (517/999 nt)	cmaX	protein CmaX
	?	NC_002947	= 2377901	54 (1.180)					coding (542/999 nt)	cmaX	protein CmaX

GAAATTCTCCAGCTGCTGGAACAGGGCAGGGGGCCGAAATCGGCCTCGGAACTGTTGCTGTTGATGGGCGAGTTGCTGACCGAAAAGGTCCAGGGCCTGG‑‑TCAGCGACCTGGCCGAGCTCGTCGATCTGGAGGAAGAAAAGGTCGAATCCGACGAGCGGTATGCCCCGGAGCAGGGCAGCCTGCAGCAGATCCGCCGCCGTGCCGCTGGCTTGCGCCGCTTTCTCGCCCCGCAACGGGAAATCTACGCGCAGTTGTCGCGCAGCAAATGGAGCTGGTTCGCCAATGCCGACGC  >  NC_002947/2377753‑2378045                                                                                                                                                       |                                                                                                                                                 gAAATTCTCCAGCTGCTGGAACAGGGCAGGGGGCCGAAATCGGCCTCGGAACTGTTGCTGTTGATGGGCGAGTTGCTGACCGAAAAGGTCCAGGGCCTGG‑‑TCAGCGACCTGGCCGAGCTCGTCGATCTGGAGGAAGAAAAGGTCGAATc                                                                                                                                                  >  2:95977/1‑149 (MQ=255)          cAGCTGCTGGAACAGGGCAGGGGGCCGAAATCGGCCTCGGAACTGTTGCTGTTGATGGGCGAGTTGCTGACCGAAAAGGTCCAGGGCCTGG‑‑TCAGCGACCTGGCCGAGCTCGTCGATCTGGAGGAAGAAAAGGTCGAATCcgacgag                                                                                                                                           >  4:273104‑M2/1‑140 (MQ=255)            gctgctGGAACAGGGCAGGGGGCCGAAATCGGCCTCGGAACTGTTGCTGTTGATGGGCGAGTTGCTGACCGAAAAGGTCCAGGGCCTGG‑‑TCAGCGACCTGGCCGAGCTCGTCGATCTGGAGGAAGAAAAGGTCGAATCcgac                                                                                                                                              >  6:251278‑M2/1‑138 (MQ=255)            gctgctGGAACAGGGCAGGGGGCCGAAATCGGCCTCGGAACTGTTGCTGTTGATGGGCGAGTTGCTGACCGAAAAGGTCCAGGGCCTGG‑‑TCAGCGACCTGGCCGAGCTCGTCGATCTGGAGGAAGAAAAGGTCGAATCcgac                                                                                                                                              <  5:251278‑M2/142‑5 (MQ=255)                ctgGAACAGGGCAGGGGGCCGAAATCGGCCTCGGAACTGTTGCTGTTGATGGGCGAGTTGCTGACCGAAAAGGTCCAGGGCCTGG‑‑TCAGCGACCTGGCCGAGCTCGTCGATCTGGAGGAAGAAAAGGTCGAATCCGACGAGCGGTAt                                                                                                                                     <  5:272445/147‑1 (MQ=255)                  ggAACAGGGCAGGGGGCCGAAATCGGCCTCGGAACTGTTGCTGTTGATGGGCGAGTTGCTGACCGAAAAGGTCCAGGGCCTGG‑‑TCAGCGACCTGGCCGAGCTCGTCGATCTGGAGGAAGAAAAGGTCGAATCCGACGAGCGGTATGccc                                                                                                                                 >  8:95639/1‑149 (MQ=255)                   gAACAGGGCAGGGGGCCGAAATCGGCCTCGGAACTGTTGCTGTTGATGGGCGAGTTGCTGACCGAAAAGGTCCAGGGCCTGG‑‑TCAGCGACCTGGCCGAGCTCGTCGATCTGGAGGAAGAAAAGGTCGAATCCGACGAGCGGTATGcccc                                                                                                                                >  1:224861/1‑149 (MQ=255)                   gAACAGGGCAGGGGGCCGAAATCGGCCTCGGAACTGTTGCTGTTGATGGGCGAGTTGCTGACCGAAAAGGTCCAGGGCCTGG‑‑TCAGCGACCTGGCCGAGCTCGTCGATCTGGAGGAAGAAAAGGTCGAATCCGACGAGCGGTATGcccc                                                                                                                                >  8:276178/1‑149 (MQ=255)                    aaCAGGGCAGGGGGCCGAAATCGGCCTCGGAACTGTTGCTGTTGATGGGCGAGTTGCTGACCGAAACGGTCCAGGGCCTGG‑‑TCAGCGACCTGGCCGAGCTCGTCGATCTGGAGGAAGAAAAGGTCGAATCCGACGAGCGGTATGCCCCg                                                                                                                               <  6:292772/149‑1 (MQ=255)                    aaCAGGGCAGGGGGCCGAAATCGGCCTCGGAACTGTTGCTGTTGATGGGCGAGTTGCTGACCGAAAAGGTCCAGGGCCTGG‑‑TCAGCGACCTGGCCGAGCTCGTCGATCTGGAGGAAGAAAAGGTCGAATCCGACGAGCGGTATGCCCCg                                                                                                                               >  3:163380/1‑149 (MQ=255)                       agggcagggGGCCGAAATCGGCCTCGGAACTGTTGCTGTTGATGGGCGAGTTGCTGACCGAAAAGGTCCAGGGCCTGG‑‑TCAGCGACCTGGCCGAGCTCGTCGATCTGGAGGAAGAAAAGGTCGAATCCGACGAGCGGTATGCCCCGGAg                                                                                                                            <  2:224861/149‑1 (MQ=255)                         ggcagggGGCCGAAATCGGCCTCGGAACTGTTGCTGTTGATGGGCGAGTTGCTGACCGAAAAGGTCCAGGGCCTGG‑‑TCAGCGACCTGGCCGAGCTCGTCGATCTGGAGGAAGAAAAGGTCGAATCCGACGAGCg                                                                                                                                         >  3:175864/1‑134 (MQ=255)                         ggcagggGGCCGAAATCGGCCTCGGAACTGTTGCTGTTGATGGGCGAGTTGCTGACCGAAAAGGTCCAGGGCCTGG‑‑TCAGCGACCTGGCCGAGCTCGTCGATCTGGAGGAAGAAAAGGTCGAATCCGACGAGCg                                                                                                                                         <  4:175864/134‑1 (MQ=255)                                 gCCGAAATCGGCCTCGGAACTGTTGCTGTTGATGGGCGAGTTGCTGACCGAAAAGGTCCAGGGCCTGG‑‑TCAGCGACCTGGCCGAGCTCGTCGATCTGGAGGAAGAAAAGGTCGAATCCGACGAGCGGTATGCCCCGGAGCAGGGCAGcc                                                                                                                  >  8:170378/1‑149 (MQ=255)                                   cGAAATCGGCCTCGGAACTGTTGCTGTTGATGGGCGAGTTGCTGACCGAAAAGGTCCAGGGCCTGG‑‑TCAGCGACCTGGCCGAGCTCGTCGATCTGGAGGAAGAAAAGGTCGAATCCGACGAGCGGTATGCCCCGGAGCAGGGCAGCCTg                                                                                                                >  6:91571/1‑149 (MQ=255)                                    gAAATCGGCCTCGGAACTGTTGCTGTTGATGGGCGAGTTGCTGACCGAAAAGGTCCAGGGCCTGG‑‑TCAGCGACCTGGCCGAGCTCGTCGATCTGGAGGAAGAAAAGGTCGAATCCGACGAGCGGTATGCCCCGGAGCAGGGCAGCCTgc                                                                                                               <  5:91571/149‑1 (MQ=255)                                    gAAATCGGCCTCGGAACTGTTGCTGTTGATGGGCGAGTTGCTGACCGAAAAGGTCCAGGGCCTGG‑‑TCAGCGACCTGGCCGAGCTCGTCGATCTGGAGGAAG‑AAAGGTCGAATCCGACGAGCGGTATGCCCCGGAGCAGGGCAGCCTgca                                                                                                              <  5:98979/149‑1 (MQ=255)                                          ggCCTCGGAACTGTTGCTGTTGATGGGCGAGTTGCTGACCGAAAAGGTCCAGGGCCTGG‑‑TCAGCGACCTGGCCGAGCTCGTCGATCTGGAGGAAGAAAAGGTCGAATCCGACGAGCGGTATGCCCCGGAGCAGGGCAGCCTGcagcag                                                                                                          <  3:226096/148‑1 (MQ=255)                                            ccTCGGAACTGTTGCTGTTGATGGGCGAGTTGCTGACCGAAAAGGTCCAGGGCCTGGTTTCCGCGACCTGGCCGTGCTCGTCGATCTGGAGGAAGAAAAGGTCGAATCCTACGAGCGGTATGCCCCGGAGCAGGGCAGCCTGCAGCAGa                                                                                                         <  1:95977/149‑1 (MQ=255)                                                       ttgctgttgATGGGCGAGTTGCTGACCGAAAAGGTCCAGGGCCTGG‑‑TCAGCGACCTGGCCGAGCTCGTCGATCTGGAGGAAGAAAAGGTCGAATCCGACGAGCGGTATGCCCCGGAGCAGGGCAGCCTGCAGCAGATCCGCCGCCGTGc                                                                                            >  4:297702/1‑149 (MQ=255)                                                        tgctgttgATGGGCGAGTTGCTGACCGAAAAGGTCCAGGGCCTGG‑‑TCAGCGACCTGGCCGAGCTCGTCGATCTGGAGGAAGAAAAGGTCGAATCCGACGAGCGGTATGCCCCGGAGCAg                                                                                                                         >  3:204394/1‑119 (MQ=255)                                                        tgctgttgATGGGCGAGTTGCTGACCGAAAAGGTCCAGGGCCTGG‑‑TCAGCGACCTGGCCGAGCTCGTCGATCTGGAGGAAGAAAAGGTCGAATCCGACGAGCGGTATGCCCCGGAGCAg                                                                                                                         <  4:204394/119‑1 (MQ=255)                                                           tgttgATGGGCGAGTTGCTGACCGAAAAGGTCCAGGGCCTGG‑‑TCAGTGACCTGGCCGAGCTCGTCGATCTGGAGGAAGAAAAGGTCGAATCCGACGAGCGGTATGCCCCGGAGCAGGGCAGCCTgcag                                                                                                             >  5:210028/1‑128 (MQ=255)                                                           tgttgATGGGCGAGTTGCTGACCGAAAAGGTCCAGGGCCTGG‑‑TCAGTGACCTGGCCGAGCTCGTCGATCTGGAGGAAGAAAAGGTCGAATCCGACGAGCGGTATGCCCCGGAGCAGGGCAGCCTgcag                                                                                                             <  6:210028/128‑1 (MQ=255)                                                               gATGGGCGAGTTGCTGACCGAAAAGGTCCAGGGCCTGG‑‑TCAGCGACCTGGCCGAGCTCGTCGATCTGGAGGAAGAAAAGGTCGAATCCGACGAGCGGTATGCCCCGGAGCAGGGCAGCCTGCAGCAGATCCGCCGCCGTGCCGCTGGCt                                                                                    >  8:48345/1‑149 (MQ=255)                                                                  gggCGAGTTGCTGACCGAAAAGGTCCAGGGCCTGG‑‑TCAGCGACCTGGCCGAGCTCGTCGATCTGGAGGAAGAAAAGGTCGAATCCGACGAGCGGTATGCCCCGGAGCAGGGCAGCCTGCAGCAGATCCGCCGCCGTGCCGCTGGCTTgc                                                                                 >  1:46812/1‑149 (MQ=255)                                                                    gCGAGTTGCTGACCGAAAAGGTCCAGGGCCTGG‑‑TCAGCGACCTGGCCGAGCTCGTCGATCTGGAGGAAGAAAAGGTCGAATCCGACGAGCGGTATGCCCCGGAGCAGGGCAGCCTGCAGCAGATCCGCCGCCGTGCCGCTGGCTTgcgc                                                                               >  5:246634/1‑149 (MQ=255)                                                                           gCTGACCGAAAAGGTCCAGGGCCTGG‑‑TCAGCGACCTGGCCGAGCTCGTCGATCTGGAGGAAGAAAAGGTCGAATCCGACGAGCGGTATGCCCCGGAGCAGGGCAGCCTGCAGCAGATCCGCCGCCGTGCCGCTGGCTTGCGCCGCTTtc                                                                        >  4:43908/1‑149 (MQ=255)                                                                                 cGAAAAGGTCCAGGGCCTGG‑‑TCAGCGACCTGGCCGAGCTCGTCGATCTGGAGGAAGAAAAGGTCGAATCCGACGAGCGGTATGCCCCGGAGCAGGGCAGCCTGCAGCAGATCCGCCGCCGTGCCGCTGGCTTGCGCCGCTTTCTCGccc                                                                  >  5:98278/1‑149 (MQ=255)                                                                                  gAAAAGGTCCAGGGCCTGG‑‑TCAGCGACCTGGCCGAGCTCGTCGATCTGGAGGAAGAAAAGGTCGAATCCGACGAGCGGTATGCCCCGGAGCAGGGCAGCCTGCAGCAGATCCGCCGCCGTGCCGCTGGCTTGCGCCGCTTTCTCGcccc                                                                 <  4:163380/149‑1 (MQ=255)                                                                                   aaaaGGTCCAGGGCCTGG‑‑TCAGCGACCTGGCCGAGCTCGTCGATCTGGAGGAAGAAAAGGTCGAATCCGACGAGCGGTATGCCCCGGAGCAGGGCAGCCTGCAGCAGATCCGCCGCCGTGCCGCTGGCTTGCGCCGCTTTCTCGCCCCg                                                                >  2:20847/1‑149 (MQ=255)                                                                                                ccTGG‑‑TCAGCGACCTGGCCGAGCTCGTCGATCTGGAGGAAGAAAAGGTCGAATCCGACGAGCGGTATGCCCCGGAGCAGGGCAGCCTGCAGCAGATCCGCCGCCGTGCCGCTGGCTTGCGCCGCTTTCTCGCCCCGCAACGGGAAATCt                                                   <  7:276178/149‑1 (MQ=255)                                                                                                   gg‑‑TCAGCGACCTGGCCGAGCTCGTCGATCTGGAGGAAGAAAAGGTCGAATCCGACGAGCGGTATGCCCCGGAGCAGGGCAGCCTGCAGCAGATCCGCCGCCGTGCCGCTGGCTTGCGCCGCTTTCTCGCCCCGCAACGGGAAATCTAcg                                                >  2:43640/1‑149 (MQ=255)                                                                                                   gg‑‑TCAGCGACCTGGCCGAGCTCGTCGATCTGGAGGAAGAAAAGGTCGAATCCGACGAGCGGTATGCCCCGGAGCAGGGCAGCCTGCAGCAGATCCGCCGCCGTGCCGCTGGCTTGCGCCGCTTTCTCGCCCCGCAACGGGAAATCTAcg                                                >  4:149677/1‑149 (MQ=255)                                                                                                    g‑‑TCAGCGACCTGGCCGAGCTCGTCGATCTGGAGGAAGAAAAGGTCGAATCCGACGAGCGGTATGCCCCGGAGCAGGGCAGCCTGCAGCAGATCCGCCGCCGTGCCGCTGGCTTGCGCCGCTTTCTCGCCCCGCAACGGGAAATCTAcgc                                               <  7:95639/149‑1 (MQ=255)                                                                                                    g‑‑TCAGCGACCTGGCCGAGCTCGTCGATCTGGAGGAAGAAAAGGTCGAATCCGACGAGCGGTATGCCCCGGAGCAGGGCAGCCTGCAGCAGATCCGCCGCCGTGCCGCTGGCTTGCGCCGCTTTCTCGCCCCGCAACGGGAAATCTAc                                                 <  2:46812/147‑1 (MQ=255)                                                                                                         aGCGACCTGGCCGAGCTAGTCGATCTGGAGGAAGAAAAGGTCGAAAACGACGAGCGGTATGCCCCGGAGCAGGGCAGCCTGCAGCAGATCCGCCGCCGTGCCGCTGGCTTGCGCCGCTTTCTCGCCCCGCAACGGGAAATCTAcgcg                                              >  3:165296/1‑147 (MQ=255)                                                                                                                 ggCCGAGCTCGTCGATCTGGAGGAAGAAAAGGTCGAATCCGACGAGCGGTATGCCCCGGAGCAGGGCAGCCTGCAGCAGATCCGCCGCCGTGCCGCTGGCTTGCGCCGCTTTCTCGCCCCGCAACGGGAAATCTAcg                                                <  8:18137/137‑1 (MQ=255)                                                                                                                 ggCCGAGCTCGTCGATCTGGAGGAAGAAAAGGTCGAATCCGACGAGCGGTATGCCCCGGAGCAGGGCAGCCTGCAGCAGATCCGCCGCCGTGCCGCTGGCTTGCGCCGCTTTCTCGCCCCGCAACGGGAAATCTAcg                                                >  7:18137/1‑137 (MQ=255)                                                                                                                 ggCCGAGCTCGTCGATCTGGAGGAAGAAAAGGTCGAATCCGACGAGCGGTATGCCCCGGAGCAGGGCAGCCTGCAGCAGATCCGCCGCCGTGCCGCTGGCTTGCGCCGCTTTCTCGCCCCGCAACGGGAAATCTACGCGCAGTTGTcgc                                    >  4:49462/1‑149 (MQ=255)                                                                                                                  gCCGAGCTCGTCGATCTGGAGGAAGAAAAGGTCGAATCCGACGAGCGGTATGCCCCGGAGCAGGGCAGCCTGCAGCAGATCCGCCGCCGTGCCGCTGGCTTGCGCCGCTTTCTCGCCCCGCAACGGGATATCTACGCGCAGTTGTcg                                     <  7:170378/147‑1 (MQ=255)                                                                                                                    cGAGCTCGTCGATCTGGAGGAAGAAAAGGTCGAATCCGACGAGCGGTATGCCCCGGAGCAGGGCAGCCTGCAGCAGATCCGCCGCCGTGCCGCTGGCTTGCGCCGCTTTCTCGCCCCGCAACGGGAAATCTACGCGCAGTTGTcgcg                                   >  4:190937/1‑147 (MQ=255)                                                                                                                    cGAGCTCGTCGATCTGGAGGAAGAAAAGGTCGAATCCGACGAGCGGTATGCCCCGGAGCAGGGCAGCCTGCAGCAGATCCGCCGCCGTGCCGCTGGCTTGCGCCGCTTTCTCGCCCCGCAACGGGAAATCTACGCGCAGTTGTCGCgca                                 <  3:43908/149‑1 (MQ=255)                                                                                                                      aGCTCGTCGATCTGGAGGAAGAAAAGGTCGAATCcgacgagctcggccaggtcgctgaccaggccctggaccttttcggtcagcaactcgcccatcaacagcaacagttccgaggccgatttcggccccct                                                 <  8:109773‑M2/131‑98 (MQ=255)                                                                                                                      aGCTCGTCGATCTGGAGGAAGAAAAGGTCGAATCcgacgagctcggccaggtcgctgaccaggccctggaccttttcggtcagcaactcgcccatcaacagcaacagttccgaggccgatttcggccccct                                                 >  7:109773‑M2/1‑34 (MQ=255)                                                                                                                      aGCTCGTCGATCTGGAGGAAGAAAAGGTCGAATCCGACGAGCGGTATGCCCCGGAGCAGGGCAGCCTGCAGCAGATCCGCCGCCGTGCCGCTGGCTTGCGCCGCTTTCTCGCCCCGCAACGGGAAATCTACGCGCAGTTGTCGCgcagc                               <  7:48345/149‑1 (MQ=255)                                                                                                                         tcgtcgATCTGGAGGAAGAAAAGGTCGAATCcgacgagctcggccaggtcgctgaccaggccctggaccttttcggtcagcaactcgcccatcaacagcaacagttccgaggccgatttcggccccctgccctgttccagcagctg                               <  2:115548‑M2/146‑116 (MQ=255)                                                                                                                         tcgtcgATCTGGAGGAAGAAAAGGTCGAATCCGACGAGCGGTATGCCCCGGAGCAGGGCAGCCTGCAGCAGATCCGCCGCCGTGCCGCTGGCTTGCGCCGCTTTCTCGCCCCGCAACGGGAAATCTACGCGCAGTTGTCGCGCAGCaaa                            <  2:201217/149‑1 (MQ=255)                                                                                                                           gtcgATCTGGAGGAAGAAAAGGTCGAATCCGACGAGCGGTATGCCCCGGAGCAGGGCAGCCTGCAGCAGATCCGCCGCCGTGCCGCTGGCTTGCGCCGCTTTCTCGCCCCGCAACgg                                                          >  8:179140/1‑117 (MQ=255)                                                                                                                           gtcgATCTGGAGGAAGAAAAGGTCGAATCCGACGAGCGGTATGCCCCGGAGCAGGGCAGCCTGCAGCAGATCCGCCGCCGTGCCGCTGGCTTGCGCCGCTTTCTCGCCCCGCAACgg                                                          <  7:179140/117‑1 (MQ=255)                                                                                                                              gATCTGGAGGAAGAAAAGGTCGAATCCGACGAGCGGTATGCCCCGGAGCAGGGCAGCCTGCAGCAGATCCGCCGCCGTGCCGCTGGCTTGCGCCGCTTTCTCGCCCCGCAACGGGAAATCTACGCGCAGTTGTCGCGCAGCAAATg                          >  4:218386/1‑146 (MQ=255)                                                                                                                              gATCTGGAGGAAGAAAAGGTCGAATCCGACGAGCGGTATGCCCCGGAGCAGGGCAGCCTGCAGCAGATCCGCCGCCGTGCCGCTGGCTTGCGCCGCTTTCTCGCCCCGCAACGGGAAATCTACGCGCAGTTGTCGCGCAGCAAATGGa                        <  3:218386/148‑1 (MQ=255)                                                                                                                                    gaggaAGAAAAGGTCGAATCCGACGAGCGGTATGCCCCGGAGCAGGGCAGCCTGCAGCAGATCCGCCGCCGTGCCGCTGGCTTGCGCCGCTTTCTCGCCCCGCAACGGGAAATCTACGCGCAGTTGTCGCGCAGCAAATGGAGCTg                    <  6:246634/146‑1 (MQ=255)                                                                                                                                     aggaAGAAAAGGTCGAATCCGACGAGCGGTATGCCCCGGAGCAGGGCAGCCTGCAGCAGATCCGCCGCCGTGCCGCTGGCTTGCGCCGCTTTCTCGCCCCGCAACGGGAAATCTACGCGCAGTTGTCGCGCAGCAAATGGAGCTGGTTc                <  1:20847/149‑1 (MQ=255)                                                                                                                                       gaagaaAAGGTCGAATCCGACGAGCGGTATGCCCCGGAGCAGGGCAGCCTGCAGCAGATCCGCCGCCGTGCCGCTGGCTTGCGCCGCTTTCTCGCCCCGCAACGGGAAATCTACGCGCAGTTGTCGCGCAGCAAATGGAg                       <  3:134316/140‑1 (MQ=255)                                                                                                                                       gaagaaAAGGTCGAATCCGACGAGCGGTATGCCCCGGAGCAGGGCAGCCTGCAGCAGATCCGCCGCCGTGCCGCTGGCTTGCGCCGCTTTCTCGCCCCGCAACGGGAAATCTACGCGCAGTTGTCGCGCAGCAAATGGAg                       >  4:134316/1‑140 (MQ=255)                                                                                                                                         agaaAAGGTCGAATCCGACGAGCGGTATGCCCCGGAGCAGGGCAGCCTGCAGCAGATCCGCCGCCGTGCCGCTGGCTTGCGCCGCTTTCTCGCCCCGCAACGGGaa                                                       <  4:99422/106‑1 (MQ=255)                                                                                                                                         agaaAAGGTCGAATCCGACGAGCGGTATGCCCCGGAGCAGGGCAGCCTGCAGCAGATCCGCCGCCGTGCCGCTGGCTTGCGCCGCTTTCTCGCCCCGCAACGGGaa                                                       >  3:99422/1‑106 (MQ=255)                                                                                                                                          gaaAAGGTCGAATCCGACGAGCGGTATGCCCCGGAGCAGGGCAGCCTGCAGCAGATCCGCCGCCGTGCCGCTGGCTTGCGCCGCTTTCTCGCCCCGCAACGGGAAATCTACGCGCAGTTGTCGCGCAGCAAATGGAGCTGGTTCGCCaa           >  5:54045/1‑149 (MQ=255)                                                                                                                                               ggacGAATCCGACGAGCGGTATGCCCCGGAGCAGGGCAGCCTGCAGCAGATCCGCCGCCGTGCCGCTGGCTTGCGCCGCTTTCTCGCCCCGCAACGGGAAATCTACGCGCAGTTGTCGCGCAGCAAATGGAGCTGGTTCGCCAATGcc       >  8:179894/4‑148 (MQ=255)                                                                                                                                                gTCGAATCCGACGAGCGGTATGCCCCGGAGCAGGGCAGCCTGCAGCAGATCCGCCGCCGTGCCGCTGGCTTGCGCCGCTTTCTCGCCCCGCAACGGGAAATCTACGCGCAGTTGTCGCGCAGCAAATGGAGCTGGTTCGCCAATGCCGa     >  7:164885/1‑149 (MQ=255)                                                                                                                                                gTCGAATCCGACGAGCGGTATGCCCCGGAGCAGGGCAGCCTGCAGCAGATCCGCCGCCGTGCCGCTGGCTTGCGCCGCTTTCTCGCCCCGCAACGGGAAATCTACGCGCAGTTGTCGCGCAGCAAATGGAGCTGGTTCGCCAATGCCGa     <  3:49462/149‑1 (MQ=255)                                                                                                                                                 tCGAATCCGACGAGCGGTATGCCCCGGAGCAGGGCAGCCTGCAGCAGATCCGCCGCCGTGCCGCTGGCTTGCGCCGCTTTCTCGCCCCGCAACGGGAAATCTACGCGCAGtt                                         >  2:244707/1‑112 (MQ=255)                                                                                                                                                 tCGAATCCGACGAGCGGTATGCCCCGGAGCAGGGCAGCCTGCAGCAGATCCGCCGCCGTGCCGCTGGCTTGCGCCGCTTTCTCGCCCCGCAACGGGAAATCTACGCGCAGtt                                         <  1:244707/112‑1 (MQ=255)                                                                                                                                                   gAATCCGACGAGCGGTATGCCCCGGAGCAGGGCAGCCTGCAGCAGATCCGCCGCCGTGCCGCTGGCTTGCGCCGCTTTCTCGCCCCGCAACGGGAAATCTACGCGCAGTTGTCGCGCAGCAAATGGAGCTGGTTCGCCAATGCCGACGc  >  5:238091/1‑149 (MQ=255)                                                                                                                                                      tCCGACGAGCGGTATGCCCCGGAGCAGGGCAGCCTGCAGCAGATCCGCCGCCGTGCCGCTGGCTTGCGCCGCTTTCTCGCCCCGCAACGGGAAATCTACGCGCAGTTGTCGCGCAGCAAATGGAGCTGGTTCGCCAATGCCGACGc  <  2:32998/146‑1 (MQ=255)                                                                                                                                                      tCCGACGAGCGGTATGCCCCGGAGCAGGGCAGCCTGCAGCAGATCCGCCGCCGTGCCGCTGGCTTGCGCCGCTTTCTCGCCCCGCAACGGGAAATCTACGCGCAGTTGTCGCGCAGCAAATGGAGCTGGTTCGCCAATGCCGACGc  >  1:32998/1‑146 (MQ=255)                                                                                                                                                       |                                                                                                                                                 GAAATTCTCCAGCTGCTGGAACAGGGCAGGGGGCCGAAATCGGCCTCGGAACTGTTGCTGTTGATGGGCGAGTTGCTGACCGAAAAGGTCCAGGGCCTGG‑‑TCAGCGACCTGGCCGAGCTCGTCGATCTGGAGGAAGAAAAGGTCGAATCCGACGAGCGGTATGCCCCGGAGCAGGGCAGCCTGCAGCAGATCCGCCGCCGTGCCGCTGGCTTGCGCCGCTTTCTCGCCCCGCAACGGGAAATCTACGCGCAGTTGTCGCGCAGCAAATGGAGCTGGTTCGCCAATGCCGACGC  >  NC_002947/2377753‑2378045

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.