New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5574364	65 (1.330)	4 (0.090)	4/252	NT	5.9%	coding (930/1041 nt)	motB	flagellar motor rotation protein
	?	NC_002947	= 5574393	64 (1.360)					coding (901/1041 nt)	motB	flagellar motor rotation protein

AAAGCCGCTTACTGTTCCTTGGCTTCATCCATCTTCAGCGTGCCATCTTCAAAGATGTTCAGCTTCTGGCGCAGCTCGCGCGGTTGCATCGGTGCCTGTTCAGTTGCCCCTGGGTCAGC‑CGGTGCCGAAGCCCCTGGCGCAGCACCACTGGCTGGCG‑CTGCAGGTGCCGTTGGCGCAGCTGGCGGTGTTTCCGGCGCACCCTGCTCACCTTCGATATTGCGCTGGGCTTTCTTGGTCAGCACGATGATGTCGATACGGCGGTTGACCGGGTTGAACGGGTCCTTGCGGTCGAACA  >  NC_002947/5574245‑5574539                                                                                                                                                      |                                                                                                                                                    aaaGCCGCTTACTGTTCCTTGGCTTCATCCATCTTCAGCGTGCCATCTTCAAAGATGTTCAGCTTCTGGCGCAGCTCGCGCGGTTGCATCGGTGCCTGTTCAGTTGCCCCTGGGTCAGC‑CGGTGCCGAAGCCCCTGGCGCAGCACCAct                                                                                                                                                     >  5:189926/1‑149 (MQ=255)    gCCGCTTAGTGTTCCTTGGCTTCATCCATCTTCAGCGTGCCATCTTCAAAGATGTTCAGCTTCTGGCGCAGCTCGCGCGGTTGCATCGGTGCCTGTTCAGTTGCCCCTGGGTCAGC‑CGGTGCCGAAGCCCCTGGCGCAGCACCACTggc                                                                                                                                                  >  3:280866‑M2/1‑146 (MQ=255)     ccGCTTACTGTTCCTTGGCTTCATCCATCTTCAGCGTGCCATCTTCAAAGATGTTCAGCTTCTGGCGCAGCTCGCGCGGTTGCATCGGTGCCTGTTCAGTTGCCCCTGGGTCAGC‑CGGTGCCGAAGCCCCTGGCGCAGCACCACTggct                                                                                                                                                 <  8:95110‑M2/149‑5 (MQ=255)                  cTTGGCTTCATCCATCTTCAGCGTGCCATCTTCAAAGATGTTCAGCTTCTGGCGCAGCTCGCGCGGTTGCATCGGTGCCTGTTCAGTTGCCCCTGGGTCAGC‑CGGTGCCGAAGCCCCTGGCGCAGCACCACTGGCTGGCG‑CTGCAGGTg                                                                                                                                   <  6:64018/149‑1 (MQ=255)                       cTTCATCCATCTTCAGCGTGCCATCTTCAAAGATGTTCAGCTTCTGGCGCAGCTCGCGCGGTTGCATCGGTGCCTGTTCAGTTGCCCCTGGGTCAGC‑CGGTGCCGAAGCCCCTGGCGCAGCACCACTGGCTGgcg                                                                                                                                             >  1:249273/1‑135 (MQ=255)                       cTTCATCCATCTTCAGCGTGCCATCTTCAAAGATGTTCAGCTTCTGGCGCAGCTCGCGCGGTTGCATCGGTGCCTGTTCAGTTGCCCCTGGGTCAGC‑CGGTGCCGAAGCCCCTGGCGCAGCACCACTGGCTGgcg                                                                                                                                             <  2:249273/135‑1 (MQ=255)                       cTTCATCCATCTTCAGCGTGCCATCTTCAAAGATGTTCAGCTTCTGGCGCAGCTCGCGCGGTTGCATCGGTGCCTGTTCAGTTGCCCCTGGGTCAGC‑CGGTGCCGAAGCCCCTGGCGCAGCACCACTGGCTGGCG‑CTGCAGGTGCCGtt                                                                                                                              >  6:13582/1‑149 (MQ=255)                        ttCATCCATCTTCAGCGTGCCATCTTCAAAGATGTTCAGCTTCTGGCGCAGCTCGCGCGGTTGCATCGGTGCCTGTTCAGTTGCCCCTGGGTCAGC‑CGGTGCCGAAGCCCCTGGCGCAGCACCACTGGCTGGCG‑CTGCAGGTGCCGTTg                                                                                                                             >  3:148830/1‑149 (MQ=255)                          catccatcTTCAGCGTGCCATCTTCAAAGATGTTCAGCTTCTGGCGCAGCTCGCGCGGTTGCATCGGTGCCTGTTCAGTTGCCCCTGGGTCAGC‑CGGTGCCGAAGCCCCTGGCGCAGCACCACTGGCTGGCG‑CTGCAGGTGCCGTTg                                                                                                                             <  6:145077/147‑1 (MQ=255)                          catccatcTTCAGCGTGCCATCTTCAAAGATGTTCAGCTTCTGGCGCAGCTCGCGCGGTTGCATCGGTGCCTGTTCAGTTGCCCCTGGGTCAGC‑CGGTGCCGAAGCCCCTGGCGCAGCACCACTGGCTGGCG‑CTGCAGGTGCCGTTg                                                                                                                             <  5:13582/147‑1 (MQ=255)                              catcTTCAGCGTGCCATCTTCAAAGATGTTCAGCTTCTGGCGCAGCTCGCGCGGTTGCATCGGTGCCTGTTCAGTTGCCCCTGGGTCAGC‑CGGTGCCGAAGCCCCTGGCGCAGCACCACTGGCTGGCG‑CTGCAGGTGCCGTTGGCGCAg                                                                                                                       <  6:189926/149‑1 (MQ=255)                               atcTTCAGCGTGCCATCTTCAAAGATGTTCAGCTTCTGGCGCAGCTCGCGCGGTTGCATCGGTGCCTGTTCAGTTGCCCCTGGGTCAGC‑CGGTGCCGAAGCCCCTGGCGCAGCACCACTGGCTGGCG‑CTGCAGGTGCCGTTGgc                                                                                                                           <  4:199520/144‑1 (MQ=255)                               atcTTCAGCGTGCCATCTTCAAAGATGTTCAGCTTCTGGCGCAGCTCGCGCGGTTGCATCGGTGCCTGTTCAGTTGCCCCTGGGTCAGC‑CGGTGCCGAAGCCCCTGGCGCAGCACCACTGGCTGGCG‑CTGCAGGTGCCGTTGgc                                                                                                                           >  3:199520/1‑144 (MQ=255)                                     aGCGTGCCATCTTCAAAGATGTTCAGCTTCTGGCGCAGCTCGCGCGGTTGCATCGGTGCCTGTTCAGTTGCCCCTGGGTCAGC‑CGGTGCCGAAGCCCCTGGCGCAGCACCACTGGCTGGCGCCTGCAGGTGCCGTTGGCGCAGCTGGCg                                                                                                                 <  1:12910/149‑1 (MQ=255)                                         tGCCATCTTCAAAGATGTTCAGCTTCTGGCGCAGCTCGCGCGGTTGCATCGGTGCCTGTTCAGTTGCCCCTGGGTCAGC‑CGGTGCCGAAGCCCCTGGCGCAGCACCTCTGGCTGGCG‑CTGCAGGTGCCGTTGGCGCAGCTGGCGGTGtt                                                                                                            <  1:129021/149‑1 (MQ=255)                                           ccATCTTCAAAGATGTTCAGCTTCTGGCGCAGCTCGCGCGGTTGCATCGGTGCCTGTTCAGTTGCCCCTGGGTCAGC‑CGGTGCCGAAGCCCCTGGCGCAGCACCACTGGCTGGCG‑CTGCAGGTGCCGTTGGCGCAGCTGGCGGTGTTTc                                                                                                          >  7:195965/1‑149 (MQ=255)                                            cATCTTCAAAGATGTTCAGCTTCTGGCGCAGCTCGCGCGGTTGCATCGGTGCCTGTTCAGTTGCCCCTGGGTCAGC‑CGGTGCCGAAGCCCCTGGCGCAGCACCACTGGCTGGCG‑CTGCAGGTGCCGTTGGCGCAGCt                                                                                                                     <  8:52102/137‑1 (MQ=255)                                            cATCTTCAAAGATGTTCAGCTTCTGGCGCAGCTCGCGCGGTTGCATCGGTGCCTGTTCAGTTGCCCCTGGGTCAGC‑CGGTGCCGAAGCCCCTGGCGCAGCACCACTGGCTGGCG‑CTGCAGGTGCCGTTGGCGCAGCt                                                                                                                     >  7:52102/1‑137 (MQ=255)                                            cATCTTCAAAGATGTTCAGCTTCTGGCGCAGCTCGCGCGGTTGCATCGGTGCCTGTTCAGTTGCCCCTGGGTCAGC‑CGGTGCCGAAGCCCCTGGCGCAGCACCACTGGCTGGCG‑CTGCAGGTGCCGTTGGCGCAGCTGGCGGTGTTTcc                                                                                                         >  7:63113/1‑149 (MQ=255)                                              tCTTCAAAGATGTTCAGCTTCTGGCGCAGCTCGCGCGGTTGCATCGGTGCCTGTTCAGTTGCCCCTGGGTCAGC‑CGGTGCCGAAGCCCCTGGCGCAGCACCACTGGCTGGCG‑CTGCAGGTGCCGTTGGCGCAGCTGGCGGTGTTTCCgg                                                                                                       >  6:109869/1‑149 (MQ=255)                                                ttCAAAGATGTTCAGCTTCTGGCGCAGCTCGCGCGGTTGCATCGGTGCCTGTTCAGTTGCCCCTGGGTCAGC‑CGGTGCCGAAGCCCCTGGCGCAGCACCACTGGCTGGCG‑CTGCAGGTGCCGt                                                                                                                               >  6:302889/1‑123 (MQ=255)                                                ttCAAAGATGTTCAGCTTCTGGCGCAGCTCGCGCGGTTGCATCGGTGCCTGTTCAGTTGCCCCTGGGTCAGC‑CGGTGCCGAAGCCCCTGGCGCAGCACCACTGGCTGGCG‑CTGCAGGTGCCGt                                                                                                                               <  5:302889/123‑1 (MQ=255)                                                ttCAAAGATGTTCAGCTTCTGGCGCAGCTCGCGCGGTTGCATCGGTGCCTGTTCAGTTGCCCCTGGGTCAGC‑CGGTGCCGAAGCCCCTGGCGCAGCACCACTGGCTGGCG‑CTGCAGGTGCCGTTGGCGCAGCTGGCGGTGTTTCCGgcg                                                                                                     >  5:97655/1‑149 (MQ=255)                                                   aaaGATGTTCAGCTTCTGGCGCAGCTCGCGCGGTTGCATCGGTGCCTGTTCAGTTGCCCCTGGGTCAGC‑CGGTGCCGAAGCCCCTGGCGCAGCACCACTGGCTGGCG‑CTGc                                                                                                                                        <  1:85142/111‑1 (MQ=255)                                                   aaaGATGTTCAGCTTCTGGCGCAGCTCGCGCGGTTGCATCGGTGCCTGTTCAGTTGCCCCTGGGTCAGC‑CGGTGCCGAAGCCCCTGGCGCAGCACCACTGGCTGGCG‑CTGc                                                                                                                                        >  2:85142/1‑111 (MQ=255)                                                   aaaGATGTTCAGCTTCTGGCGCAGCTCGCGCGGTTGCATCGGTGCCTGTTCAGTTGCCCCTGGGTCAGC‑CGGTGCCGAAGCCCCTGGCGCAGCACCACTGGCTGGCG‑CTGCAGGTGCCGTTGGCGCAGCTGGCGGTGTTTCCGGCGCAc                                                                                                  >  5:288689/1‑149 (MQ=255)                                                     tatgcttCAGCTTCTGGCGCAGCTCGCGCGGTTGCATCGGTGCCTGTTCAGTTGCCCCTGGGTCAGC‑CGGTGCCGAAGCCCCTGGCGCAGCACCACTGGCTGGCG‑CTGCAGGTGCCGTTGGCGCAGCTGGCGGTGTTTCCGGCGCAccc                                                                                                <  1:246947/144‑1 (MQ=255)                                                      gATGTTCAGCTTCTGGCGCAGCTCGCGCGGTTGCATCGGTGCCTGTTCAGTTGCCCCTGGGTCAGC‑CGGTGCCGAAGCCCCTGGCGCAGCACCACTGGCTGGCG‑CTGCAGGTGCCGTTGGCGCAGCTGGCGGTGTTTCCGGCGCACCCt                                                                                               <  7:95110/149‑1 (MQ=255)                                                           tCAGCTTCTGGCGCAGCTCGCGCGGTTGCATCGGTGCCTGTTCAGTTGCCCCTGGGTCAGC‑CGGTGCCGAAGCCCCTGGCGCAGCACCACTGGCTGGCG‑CTGCAGGTGCCGTTGGCGCAGCTGGCGGTGTTTCCGGCGCACCCTGCTCa                                                                                          >  1:259052/1‑149 (MQ=255)                                                              gCTTCTGGCGCAGCTCGCGCGGTTGCATCGGTGCCTGTTCAGTTGCCCCTGGGTCAGC‑CGGTGCCGAAGCCCCTGGCGCAGCACCACTGGCTGGCG‑CTGCAGGTGCCGTTGGCGCAGCTGGCGGTGTTTCCGGCGCACCCTGCTCACCt                                                                                       <  4:193773/149‑1 (MQ=255)                                                                ttCTGGCGCAGCTCGCGCGGTTGCATCGGTGCCTGTTCAGTTGCCCCTGGGTCAGC‑CGGTGCCGAAGCCCCTGGCGCAGCACCACTGGCTGGCG‑CTGCAGGTGCCGTTGGCGCAGCTGGCGGTGTTTCCGGCGCACCCTGCTCACCTTc                                                                                     >  8:208885/1‑149 (MQ=255)                                                                  cTGGCGCAGCTCGCGCGGTTGCATCGGTGCCTGTTCAGTTGCCCCTGGGTCAGC‑CGGTGCCGAAGCCCCTGGCGCAGCACCACTGGCTGGCG‑CTGCAGGTGCCGTTGGCGCAGCTGGCGGTGTTTCCGGCGCACCCTGCTCACCTTCg                                                                                    <  6:288689/148‑1 (MQ=255)                                                                  cTGGCGCAGCTCGCGCGGTTGCATCGGTGCCTGTTCAGTTGCCCCTGGGTCAGC‑CGGTGCCGAAGCCCCTGGCGCAGCACCACTGGCTGGCG‑CTGCAGGTGCCGTTGGCGCAGCTGGCGGTGTTTCCGGCGCACCCTGCTCACCTTCg                                                                                    <  8:63113/148‑1 (MQ=255)                                                                     gcgcAGCTCGCGCGGTTGCATCGGTGCCTGTTCAGTTGCCCCTGGGTCAGC‑CGGTGCCGAAGCCCCTGGCGCAGCACCACTGGCTGGCG‑CTGCAGGTGCCGTTGGCGCAGCTGGCGGTGTTTCCGGCGCACCCTGCTCACCTTCGa                                                                                   <  4:94963/146‑1 (MQ=255)                                                                      cgcAGCTCGCGCGGTTGCATCGGTGCCTGTTCAGTTGCCCCTGGGTCAGC‑CGGTGCCGAAGCCCCTGGCGCAGCACCACTGGCTGGCG‑CTGCAGGTGCCGTTGGCGCAGCTGGCGGTGTTTCCGGCGCACCCTGCTCACCTTCGATAtt                                                                               <  4:148830/149‑1 (MQ=255)                                                                            tCGCGCGGTTGCATCGGTGCCTGTTCAGTTGCCCCTGGGTCAGC‑CGGTGCCGAAGCCCCTGGCGCAGCACCACTGGCTGGCG‑CAGCAGGTGCCGTTGGCGCAGCTGGCGGTGTTTCCGGCGCACCCTGCTCACCTTCGATATTGCGCTg                                                                         >  2:294139/1‑149 (MQ=255)                                                                              gcgcgGTTGCATCGGTGCCTGTTCAGTTGCCCTTGGGTCAGC‑CGGTGCCGAAGCCCCTGGCGCAGCACCACTGGCTGGCG‑CTGCAGGTGCCGTTGGCGCAGCTGGCGGTGTTTCCGGCGCACCCTGCTCACCTTCGATATTGCGCTggg                                                                       >  4:268769/1‑149 (MQ=255)                                                                              gcgcgGTTGCATCGGTGCCTGTTCAGTTGCCCCTGGGTCAGC‑CGGTGCCGAAGCCCCTGGCGCAGCACCACTGGCTGGCG‑CTGCAGGTGCCGTTGGCGCAGCTGGCGGTGTTTCCGGCGCACCCTGCTCACCTTCGATATTGCGCTggg                                                                       >  5:141574/1‑149 (MQ=255)                                                                              gcgcgGTTGCATCGGTGCCTGTTCAGTTGCCCCTGGGTCAGC‑CGGTGCCGAAGCCCCTGGCGCAGCACCACTGGCTGGCG‑CTGCAGGTGCCGTTGGCGCAGCTGGCGGTGTTTCCGGCGCACCCTGCTCACCTTCGATATTGCGCTggg                                                                       <  8:195965/149‑1 (MQ=255)                                                                                  ggTTGCATCGGTGCCTGTTCAGTTGCCCCTGGGTCAGC‑CGGTGCCGAAGCCCCTGGCGCAGCACCACTGGCTGGCG‑CTGCAGGTGCCGTTGGCGCAGCTGGCGGTGTTTCCGGCGCACCCTGCTCACCTTCGATATTGCGCTGGGCttt                                                                   >  7:129685/1‑149 (MQ=255)                                                                                       cATCGGTGCCTGTTCAGTTGGCCCTGGGTCAGC‑CGGTGCCGAAGCCCCTGGCGCAGCACCACTGGCTGGCG‑CTGCAGGTGCCGTTGGCGCAGCTGGCGGTGTTTCCGGCGCACCCTGCTCACCTTCGATATTGCGCTGGGCTTTCTTg                                                               <  4:222289/148‑1 (MQ=255)                                                                                       cATCGGTGCCTGTTCAGTTGCCCCTGGGTCAGCTCGGTGCCGAAGCCCCTGGCGCAGCACCACTGGCTGGCG‑CTGCAGGTGCCGTTGGCGCAGCTGGCGGTGTTTCCGGCGCACCCTGCTCACCTTCGATATTGCGCTGGGCTTTCTTg                                                               >  1:196918/1‑149 (MQ=255)                                                                                       cATCGGTGCCTGTTCAGTTGCCCCTGGGTCAGC‑CGGTGCCGAAGCCCCTGGCGCAGCACCACTGGCTGGCG‑CTGCAGGTGCCGTTGGCGCAGCTGGCGGTGTTTCCGGCGCACCCTGCTCACCTTCGATATTGCGCTGGGCTTTCTTgg                                                              >  4:66609/1‑149 (MQ=255)                                                                                       cATCGGTGCCTGTTCAGTTGCCCCTGGGTCAGC‑CGGTGCCGAAGCCCCTGGCGCAGCACCACTGGCTGGCG‑CTGCAGGTGCCGTTGGCGCAGCTGGCGGTGTTTCCGGCGCACCCTGCTCACCTTCGATATTGCGCTGGGCTTTCTTg                                                               <  7:208885/148‑1 (MQ=255)                                                                                        aTCGGTGCCTGTTCAGTTGCCCCTGGGTCAGC‑CGGTGCCGAAGCCCCTGGCGCAGCACCACTGGCTGGCG‑CTGCAGGTGCCGTTGGCGCAGCTGGCGGTGTTTCCGGCGCACCCTGCTCACCTTCGATATTGCGCTGGGCTTTCTTGGt                                                             <  8:217329/149‑1 (MQ=255)                                                                                        aTCGGTGCCTGTTCAGTTGCCCCTGGGTCAGC‑CGGTGCCGAAGCCCCTGGCGCAGCACCACTGGCTGGCG‑CTGCAGGTGCCGTTGGCGCAGCTGGCGGTGTTTCCGGCGCACCCTGCTCACCTTCGATATTGCGCTGGGCTTTCTTGGt                                                             >  5:31976/1‑149 (MQ=255)                                                                                                 tGTTCAGTTGCCCCTGGGTCAGC‑CGGTGCCGAAGCCCCTGGCGCAGCACCACTGGCTGGCG‑CTGCAGGTGCCGTTGGCGCAGCTGGCGGTGTTTCCGGCGCACCCTGCTCACCTTCGATATTGCGCTGGGCTTTCTTGGTCAGCACgat                                                    >  3:135699/1‑149 (MQ=255)                                                                                                     cAGTTGCCCCTGGGTCAGC‑CGGTGCCGAAGCCCCTGGCGCAGCACCACTGGCTGGCG‑CTGCAGGTGCCGTTGGCGCAGCTGGCGGTGTTTCCGGCGCACCCTGCTCACCTTCGATATTGCGCTGGGCTTTCTTGGTCAGCACGatgatg                                                >  1:54495/1‑149 (MQ=255)                                                                                                      aGTTGCCCCTGGGTCAGC‑CGGTGCCGAAGCCCCTGGCGCAGCACCACTGGCTGGCG‑CTGCAGGTGCCGTTGGCGCAGCTGGCGGTGTTTCCGGCGCACCCTGCTCACCTTCGATATTGCGCTGGGCTTTCTTg                                                               >  1:125851/1‑133 (MQ=255)                                                                                                      aGTTGCCCCTGGGTCAGC‑CGGTGCCGAAGCCCCTGGCGCAGCACCACTGGCTGGCG‑CTGCAGGTGCCGTTGGCGCAGCTGGCGGTGTTTCCGGCGCACCCTGCTCACCTTCGATATTGCGCTGGGCTTTCTTg                                                               <  2:125851/133‑1 (MQ=255)                                                                                                        ttGCCCCTGGGTCAGC‑CGGTGCCGAAGCCCCTGGCGCAGCACCACTGGCTTGCG‑CTGCAGGTGCCGTTGGCGCAGCTGGCGGTGTTTCCGGCGCACCCTGCTCACCTTCGATATTGCGCTGGGCTTTCTTGGTCAGCACGATGATGTCg                                             <  5:157183/149‑1 (MQ=255)                                                                                                             ccTGGGTCAGC‑CGGTGCCGAAGCCCCTGGCGCAGCACCACTGGCTGGCG‑CTGCAGGTGCCGTTGGCGCAGCTGGCGGTGTTTCCGGCGCACCCTGCTCACCTTCGATATTGCGCTGGGCTTTCTTGGTCAGCACGATGATGTCGATAcg                                        <  2:54495/149‑1 (MQ=255)                                                                                                                gggTCAGC‑CGGTGCCGAAGCCCCTGGCGCAGCACCACTggctgacccaggggcaactgaacaggcaccgatgcaaccgcgcgagctgcgccagaagctgaacatctttgaagatggcacgctgaagatggatgaagccaaggaacagt                                       <  6:107371‑M2/148‑111 (MQ=255)                                                                                                                  gTCAGC‑CGGTGCCGAAGCCCCTGGCGCAGCACCACTggctgacccaggggcaactgaacaggcaccgatgcaaccgcgcgagctgcgccagaagctgaacatctttgaa                                                                            <  4:73794‑M2/109‑74 (MQ=255)                                                                                                                  gTCAGC‑CGGTGCCGAAGCCCCTGGCGCAGCACCACTggctgacccaggggcaactgaacaggcaccgatgcaaccgcgcgagctgcgccagaagctgaacatctttgaa                                                                            >  3:73794‑M2/1‑36 (MQ=255)                                                                                                                   tCAGC‑CGGTGCCGAAGCCCCTGGCGCAGCACCACTggctgacccaggggcaactgaacaggcaccgatgcaaccgcgcgagctgcgccagaagctgaacatctttgaagatggcacgctgaagatggatgaagccaaggaacagtaagc                                   <  4:18777‑M2/149‑115 (MQ=255)                                                                                                                   tCAGC‑CGGTGCCGAAGCCCCTGGCGCAGCACCACTGGCTGGCG‑CTGCAGGTGCCGTTGGCGCAGCTGGCGGTGTTTCCGGCGCCCCCTGCTCACCTTCGATATTGCGCTGGGCTTTCTTGGTCAGCACGATGATGTCGATACGGCGGtt                                  >  1:206316/1‑149 (MQ=255)                                                                                                                   gcAGC‑CGGTGCCGAAGCCCCTGGCGCAGCACCACTGGCTGGCG‑CTGCAGGTGCCGTTGGCGCAGCTGGCGGTGTTTCCGGCGCACCCTGCTCACCTTCGATATTGCGCTGGGCTTTCTTGGTCAGCACGATGATGTCGATACGGCGGtt                                  <  2:196918/148‑1 (MQ=255)                                                                                                                     aGC‑CGGTGCCGAAGCCCCTGGCGCAGCACCACTGGCTGGCG‑CTGCAGGTGCCGTTGGCGCAGCTGGCGGTGTTTCCGGCGCACCCTGCTCACCTTCGATATTGCGCTGGGCTTTCTTGGTCAGCACGATGATGTCGATACGGCGGTTg                                 <  6:97655/148‑1 (MQ=255)                                                                                                                     aGC‑CGGTGCCGAAGCCCCTGGCGCAGCACCACTGGCTGGCG‑CTGCAGGTGCCGTTGGCGCAGCTGGCGGTGTTTCCGGCGCACCCTGCTCACCTTCGATATTGCGCTGGGCTTTCTTGGTCAGCACGATGATGTCGATACGGCGGTTGa                                <  6:31976/149‑1 (MQ=255)                                                                                                                      gC‑CGGTGCCGAAGCCCCTGGCGCAGCACCACTGGCTGGCG‑CTGCAGGTGCCGTTGGCGCAGCTGGCGGTGTTTCCGGCGCACCCTGCTCACCTTCGATATTGCGCTGGGGTTTCTTGGTCAGCACGCTGATGTCGATACGGCGGTTGAc                               >  6:285976/1‑149 (MQ=255)                                                                                                                       c‑cGGTGCCGAAGCCCCTGGCGCAGCACCACTGGCTGGCG‑CTGCAGGTGCCGTTGGCGCAGCTGGCGGTGTTTCCGGCGCACCCTGCTCACCTTCGATATTGCGCTGGGCTTTCTTGGTCAGCACGATGATGTCGATACGGCGGTTGAcc                              >  4:249568/1‑149 (MQ=255)                                                                                                                                gAAGCCCCTGGCGCAGCACCACTGGCTGGCG‑CTGCAGGTGCCGTTGGCGCAGCTGGCGGTGTTTCCGGCGCACGCTGCGCACCTTCGATATTGCGCTGGGGTTTCTTGGTCAGCAGGCTGATGTCGATACGGCGGTTGAGCGGGTGGag                      >  8:30676/1‑148 (MQ=255)                                                                                                                                gAAGCCCCTGGCGCAGCACCACTGGCTGGCG‑CTGCAGGTGCCGTTGGCGCAGCTGGCGGTGTTTCCGGCGCACCCTGCTCACCTTCGATATTGCGCTGGGCTTTCTTGGTCAGCACGATGATGTCGATACGGCGGTTGACCGGGTTGaa                      >  2:41558/1‑149 (MQ=255)                                                                                                                                gAAGCCCCTGGCGCAGCACCACTGGCTGGCG‑CTGCAGGTGCCGTTGGCGCAGCTGGCGGTGTTTCCGGCGCACCCTGCTCACCTTCGATATTGCGCTGGGCTTTCTTGGTCAGCACGATGATGTCGATACGGCGGTTGACCGGGTTGaa                      >  8:168093/1‑149 (MQ=255)                                                                                                                                   gCCCCTGGCGCAGCACCACTGGCTGGCG‑CTGCAGGTGCCGTTGGCGCAGCTGGCGGTGTTTCCGGCGCACCCTGCTCACCTTCGATATTGCGCTGGGCTTTCTTGGTCAGCACGATGATGTCGATACGGCGGTTGACCGGGTTGAACgg                   <  7:168093/149‑1 (MQ=255)                                                                                                                                      ccTGGCGCAGCACCACTGGCTGGCG‑CTGCAGGTGCCGTTGGCGCAGCTGGCGGTGTTTCCGGCGCACCCTGCTCACCTTCGATATTGCGCTGGGCTTTCTTGGTCAGCACGATGATGTCGATACGGCGGTTGACCGGGTTGAACGGGTc                >  8:136166/1‑149 (MQ=255)                                                                                                                                      ccTGGCGCAGCACCACTGGCTGGCG‑CTGCAGGTGCCGTTGGCGCAGCTGGCGGTGTTTCCGGCGCACCCTGCTCACCTTCGATATTGCGCTGGGCTTTCTTGGTCAGCACGATGATGTCGATACGGCGGTTGACCGGGTTGAACGGGTc                >  4:43963/1‑149 (MQ=255)                                                                                                                                       cTGGCGCAGCACCACTGGCTGGCG‑CTGCAGGTGCCGTTGGCGCAGCTGGCGGTGTTTCCGGCTCACCCTGCTCACCTTCGATATTGCGCTGGGCTTTCTTGGTCAGCACGATGATGTCGATACGGCGGTTGACCGGGTTGAACGGGTcc               <  2:259052/149‑1 (MQ=255)                                                                                                                                       cTGGCGCAGCACCACTGGCTGGCG‑CTGCAGGTGCCGTTGGCGCAGCTGGCGGTGTTTCCGGCGCACCCTGCTCACCTTCGATATTGCGCTGGGCTTTCTTGGTCAGCACGATGATGTCGATACGGCGGTTGACCGGGTTGAACGGGTcc               <  4:135699/149‑1 (MQ=255)                                                                                                                                            gcagcaCCACTGGCTGGCG‑CTGCAGGTGCCGTTGGCGCAGCTGGCGGTGTTTCCGGCGCACCCTGCTCACCTTCTATATTGCGCTGGGCTTTCTTGGTCAGCACGATGATGTCGATACGGCGGTTGACCGGGTTGAACGGGTCCTTGCg          <  3:249568/149‑1 (MQ=255)                                                                                                                                                caccacTGGCTGGCG‑CTGCAGGTGCCGTTGGCGCAGCTGGCGGTGTTTCCGGCGCACCCTGCTCACCTTCGATATTGCGCTGGGCTTTCTTGGTCAGCACCATGATGTCGATACGGCGGTTGACCGGGTTGAACGGGTCCTTGCGGTc       >  2:95619/1‑148 (MQ=255)                                                                                                                                                 accacTGGCTGGCG‑CTGCAGGTGCCGTTGGCGCAGCTGGCGGTGTTTCCGGCGCACCCTGCTCACCTTCGATATTGCGCTGGGCTTTCTTGGTCAGCACGATGATGTCGATACGGCGGTTGACCGGGTTGAACGGGTCCTTGCGGTCGa     <  7:136166/149‑1 (MQ=255)                                                                                                                                                   cacTGGCTGGCG‑CTGCAGGTGCCGTTGGCGCAGCTGGCGGTGTTTCCGGCGCACCCTGCTCACCTTCGATATTGCGCTGGGCTTTCTTGGTCAGCACGATGATGTCGATACGGCGGTTGACCGGGTTGAACGGGTCCTTGCGGTCGaa    >  3:278322/1‑148 (MQ=255)                                                                                                                                                    acTGGCTGGCG‑CTGCAGGTGCCGTTGGCGCAGCTGGCGGTGTTTCCGGCGCACCCTGCTCACCTTCGATATTGCGCTGGGCTTTCTTGGTCAGCACGATGATGTCGATACGGCGGTTGACCGGGTTGAACGGGTCCTTGCGGTCGAACa  <  3:268769/149‑1 (MQ=255)                                                                                                                                                     ctggctggCG‑CTGCTGGTGCCGTTGGCGCAGCTGGCGGTGTTTCCGGTGCACGCTGCTCACCTTCGATATTGCGCTGGGCTTTCTTGGTCAGCACGATGATGTCGATACGGCGGTTGACCGGGTTGAActg                   <  7:198805/131‑3 (MQ=255)                                                                                                                                                     ctggctggCG‑CTGCAGGTGCCGTTGGCGCAGCTGGCGGTGTTTCCGGCGCACCCTGCTCACCTTCGATATTTCGCTGGGCTTTCTTGGTCAGCACGATGATGTCGATAAGGCGGTTGCCCGGGTGGAACgg                   >  8:198805/1‑131 (MQ=255)                                                                                                                                                      |                                                                                                                                                    AAAGCCGCTTACTGTTCCTTGGCTTCATCCATCTTCAGCGTGCCATCTTCAAAGATGTTCAGCTTCTGGCGCAGCTCGCGCGGTTGCATCGGTGCCTGTTCAGTTGCCCCTGGGTCAGC‑CGGTGCCGAAGCCCCTGGCGCAGCACCACTGGCTGGCG‑CTGCAGGTGCCGTTGGCGCAGCTGGCGGTGTTTCCGGCGCACCCTGCTCACCTTCGATATTGCGCTGGGCTTTCTTGGTCAGCACGATGATGTCGATACGGCGGTTGACCGGGTTGAACGGGTCCTTGCGGTCGAACA  >  NC_002947/5574245‑5574539

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.