| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 436350 = | 48 (0.850) | 5 (0.090) | 5/242 | NT | 10.7% | intergenic (+183/+50) | PP_0357/PP_0358 | ACT domain‑containing protein/membrane protein |
| ? | NC_002947 | 436383 = | 39 (0.740) | intergenic (+216/+17) | PP_0357/PP_0358 | ACT domain‑containing protein/membrane protein | |||||
CGACGAGCATTTGTCGTCGAGCACCCTGGCGGCCTTCATGTTCATCTGGGCAGGTTTGGCGATTTACAGCGTCGATGCATGGCTGAACTTGCGCAAACGTAGCTGATCAGAAAACGATCAAAACTCTGCAGGTCATGTAGCGCCTGGCCTGCAGAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/436505‑436350‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cctgcagagTTTTGATCGTTTTCTGATCAGCTACGTTTGCGCAAGTTCAGCCATGCATCGACGCTGTAAATCGCCAAACCTGCCCAGATGAACATGAAGGCCGCCAGGGTGCTCGACGACAAATGCTCGTCGAACAGCACTACGGCCTGCAACAGCA > NC_002947/436383‑436530 CGACGAGCATTTGTCGTCGAGCACCCTGGCGGCCTTCATGTTCATCTGGGCAGGTTTGGCGATTTACAGCGTCGATGCATGGCTGAACTTGCGCAAACGTAGCTGATCAGAAAACGATCAAAACTCTGCAGGTCATGTAGCGCCTGGCC > 6:234300/1‑149CGACGAGCATTTGTCGTCGAGCACCCTGGCGGCCTTCATGTTCATCTGGGCAGGTTTGGCGATTTACAGCGTCGATGCATGGCTGAACTTGCGCAAACGTAGCTGATCAGAAAACGATCAAAACTCTGCAGGTCATGTAGCGCCTGGC < 2:74118/148‑1 GAGCATTTGTCGTCGAGCACCCTGGCGGCCTTCATGTTCATCTGGGCAGGTTTGGCGATTTACAGCGTCGATGCATGGCTGAACTTGCGCAAACGTAGCTGATCAGAAAACGATCAAAACTCTGCAGGTCATGTAGCGCCTGGCCTGCA < 6:19816/149‑1 AGCATTTGTCGTCGAGCACCCTGGCGGCCTTCATGTTCATCTGGGCAGGTTTGGCGATTTACAGCGTCGATGCATGGCTGAACTTGCGCAAACGTAGCTGATCAGAAAACGATCAAAACTCTGCAGGTCATGTAGCGCCTGGCCTGCAG < 6:73584/149‑1 CATTTGTCGTCGAGCACCCTGGCGGCCTTCATGTTCATCTGGGCAGGTTTGGCGATTTACAGCGTCGATGCATGGCTGAACTTGCGCAAACGTAGCTGATCAGAAAACGATCAAAACTCTGCAGGTCATGTAGCGCCTGGCCTGCA > 4:199611/1‑146 ATTTGTCGTCGAGCACCCTGGCGGCCTTCATGTTCATCTGGGCAGGTTTGGCGATTTACAGCGTCGATGCATGGCTGAACTTGCGCAAACGTAGCTGATCAGAAAACGATCAAAACTCTGCAGGTCATGTAGCGCCTGGCCTGCAGAG > 4:171326/1‑148 CCTGGCGGCCTTCATGTTCATCTGGGCAGGTTTGGCGATTTACAGCGTCGATGCATGGCTGAACTTGCGCAAACGTAGCTGATCAGAAAACGATCAAAACTCTGCAGGCCAGGCGCTACATGACCTGCAGAGTTTTGATCGTTTTCTGA < 3:256973/149‑1 GATGCATGGCTGAACTTGCGCAAACGTAGCTGATCAGAAAACGATCAAAACTCTGCAGGTCATGTAGCGCCTGGCCTGCAGA > 2:103939/1‑82 GATGCATGGCTGAACTTGCGCAAACGTAGCTGATCAGAAAACGATCAAAACTCTGCAGGTCATGTAGCGCCTGGCCTGCAGA < 1:103939/82‑1 GATCAAAACTCTGCAGGTCATGTAGCGCCTGGCCTGCAGAGTTTTGATCGTTTTCTGATCAGCTACGTTTGCGCAAGTTCAGCCATGCATCGACGCTGTAAATCGCCAAACCTGCCCAGATGAACATGAAGGCCGCCAGGGTGCTCGAC < 4:256973/149‑1 TCAAAACTCTGCAGGTCATGTAGCGCCTGGCCTGCAGAGTTTTGATCGTTTTCTGATCAGCTACGTTTGCGCAAGTTCAGCCATGCATCGACGCTGTAAATCGCCAAACCTGCCCAGATGAACATGAAGGCCGCCAGGGTGCTCGACGA > 1:44223/1‑149 CTGCAGGTCATGTAGCGCCTGGCCTGCAGAGTTTTGATCGTTTTCTGATCAGCTACGTTTGCGCAAGTTCAGCCATGCATCGACGCTGTAAATCGCCAAACCTGCCCAGATGAACATGAAGGCCGCCAGGGTGCTCGACGACAAATGCT > 3:26887/1‑149 CAGGTCATGTAGCGCCTGGCCTGCAGAGTTTTGATCGTTTTCTGATCAGCTACGTTTGCGCAAGTTCAGCCATGCATCGACGCTGTAAATCGCCAAACCTGCCCAGATGAACATGAAGGCCGCCAGGGTGCTCGACGACAAATGCTC < 2:44223/147‑1 CTGCAGAGTTTTGATCGTTTTCTGATCAGCTACGTTTGCGCAAGTTCAGCCATGCATCGACGCTGTAAATCGCCAAACCTGCCCAGATGAACATGAAGGCCGCCAGGGTGCTCGACGACAAATGCTCGTCGAACAGCACTACGGCCTGC < 3:36868/149‑1 TGCAGAGTTTTGATCGTTTTCTGATCAGCTACGTTTGCGCAAGTTCAGCCATGCATCGACGCTGTAAATCGCCAAAACTGCCCAGATGAACATGAAGGCCGCCAGGGTGCTCGACGACAAATGCTCGTCGAACAGCACTACGGCCTGCA > 8:204671/1‑149 CAGAGTTTTGATCGTTTTCTGATCAGCTACGTTTGCGCAAGTTCAGCCATGCATCGACGCTGTAAATCGCCAAACCTGCCCAGATGAACATGAAGGCCGCCAGGGTGCTCGACGACAAATGCTCGTCGAACAGCACTACGGCCTGCAA > 6:286509/1‑148 GTTTTGATCGTTTTCTGATCAGCTACGTTTGCGCAAGTTCATCCATGCATCGACGCTGTAAATCGCCAAACCTGCCCAGATGAACATGAAGGCCGCCAGGGTGCTCGACGACAAATGCTCGTCGAACAGCACTACGGCCTGCAACAGCA < 2:321991/149‑1 CGACGAGCATTTGTCGTCGAGCACCCTGGCGGCCTTCATGTTCATCTGGGCAGGTTTGGCGATTTACAGCGTCGATGCATGGCTGAACTTGCGCAAACGTAGCTGATCAGAAAACGATCAAAACTCTGCAGGTCATGTAGCGCCTGGCCTGCAGAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/436505‑436350‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cctgcagagTTTTGATCGTTTTCTGATCAGCTACGTTTGCGCAAGTTCAGCCATGCATCGACGCTGTAAATCGCCAAACCTGCCCAGATGAACATGAAGGCCGCCAGGGTGCTCGACGACAAATGCTCGTCGAACAGCACTACGGCCTGCAACAGCA > NC_002947/436383‑436530 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |