New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	436350 =	48 (0.850)	5 (0.090)	5/242	NT	10.7%	intergenic (+183/+50)	PP_0357/PP_0358	ACT domain‑containing protein/membrane protein
	?	NC_002947	436383 =	39 (0.740)					intergenic (+216/+17)	PP_0357/PP_0358	ACT domain‑containing protein/membrane protein

CGGGGAAGGCCCTGTGGATAACCTGGGGGTGTACCTCTCCAGCCCAGGTATCACGTGCCTTGTACGGTTTTGCTCAAAAAATGCCCAATTATCAGCAGCTTGTGCACAAA‑GCGCGGGGACGAGGGTGTGGATAACCTATGGAGATGTCTCTGCAGGCCAGGCGCTACATGACCTGCAGAGTTTTGATCGTTTTCTGATCAGCTACGTTTGCGCAAGTTCAGCCATGCATCGACGCTGTAAATCGCCAAACCTGCCCAGATGAACATGAAGGCCGCCAGGGTGCTCGACGACAAAT  >  NC_002947/436203‑436497                                                                                                                                                     |                                                                                                                                                    tgctgttgcaggccgtagtgctgttcgacgagcatttgtcgtcgagcaccctggcggccttcatgttcatctgggcaggtttggcgatttacagcgtcgatgcatggatgaacttgcgcaaacgtagctgatcagaaaacgatcaaaac                                                                                                                                                     <  2:321991‑M1/1‑1 (MQ=255)     gAAGGCCCTGTGGATAACCTGGGGGTGTACCTCTCCAGCCCAGGTATCACGTGCCTTGTACGGTTTTGCTCAAAAAATGCCCAATTATCAGCAGCTTGTGCACAAA‑GCGCGGGGACGAGGGTGTGGATAACCTATGGAGATGTCTCTGc                                                                                                                                                <  3:357315/149‑1 (MQ=255)      ttgcaggccgtagtgctgttcgacgagcatttgtcgtcgagcaccctggcggccttcatgttcatctgggcaggtttggcgatttacagcgtcgatgcatggctgaacttgcgcaaacgtagctgatcagaaaacgatcaaaaCTCTg                                                                                                                                                 >  6:286509‑M1/144‑148 (MQ=255)       tgcaggccgtagtgctgttcgacgagcatttgtcgtcgagcaccctggcggccttcatgttcatctgggcagttttggcgatttacagcgtcgatgcatggctgaacttgcgcaaacgtagctgatcagaaaacgatcaaaaCTCTGca                                                                                                                                               >  8:204671‑M1/143‑149 (MQ=255)       aGGCCCTGTGGATAACCTGGGGGTGTACCTCTCCAGCCCAGGTATCACGTGCCTTGTACGGTTTTGCTCAAAAAATGCCCAATTATCAGCAGCTTGTGCACAAA‑GCGCGGGGACGAGGGTGTGGATAACCTATGGAGATGTCTCTGcag                                                                                                                                              <  4:105227/149‑1 (MQ=255)        gcaggccgtagtgctgttcgacgagcatttgtcgtcgagcaccctggcggccttcatgttcatctgggcaggtttggcgatttacagcgtcgatgcatggctgaacttgcgcaaacgtagctgatcagaaaacgatcaaaaCTCTGcag                                                                                                                                              <  3:36868‑M1/8‑1 (MQ=255)            cTGTGGATAACCTGGGGGTGTACCTCTCCAGCCCAGGTATCACGTGCCTTGTACGGTTTTGCTCAAAAAATGCCCAATTATCAGCAGCTTGTGCACAAA‑GCGCGGGGACGAGGGTGTGGATAACCTATGGAGATGTCTCTGcaggccag                                                                                                                                         <  2:274116/149‑1 (MQ=255)            cTGTGGATAACCTGGGGGTGTACCTCTCCAGCCCAGGTATCACGTGCCTTGTACGGTTTTGCTCAAAAAATGCCCAATTATCAGCAGCTTGTGCACAAA‑GCGCGGGGACGAGGGTGTGGATAACCTATGGAGATGTCTCTGca                                                                                                                                               >  5:196898/1‑143 (MQ=255)            cTGTGGATAACCTGGGGGTGTACCTCTCCAGCCCAGGTATCACGTGCCTTGTACGGTTTTGCTCAAAAAATGCCCAATTATCAGCAGCTTGTGCACAAA‑GCGCGGGGACGAGGGTGTGGATAACCTATGGAGATGTCTCTGca                                                                                                                                               <  6:196898/143‑1 (MQ=255)                 gATAACCTGGGGGTGTACCTCTCCAGCCCAGGTATCACGTGCCTTGTACGGTTTTGCTCAAAAAATGCCCAATTATCAGCAGCTTGTGCACAAA‑GCGCGGGGACGAGGGTGTGGATAACCTATGGAGATGTCTCTGCAGGCCAGgcgc                                                                                                                                     >  3:171467/1‑148 (MQ=255)                             gtgtACCTCTCCAGCCCAGGTATCACGTGCCTTGTACGGTTTTGCTCAAAAAATGCCCAATTATCAGCAGCTTGTGCACAAA‑GCGCGGGGACGAGGGTGTGGATAACCTATGGAGATGTCTCTGCAGGCCAGGCGCTACATGACCTGCa                                                                                                                        <  4:171467/149‑1 (MQ=255)                             gtgtACCTCTCCAGCCCAGGTATCACGTGCCTTGTACGGTTTTGCTCAAAAAATGCCCAATTATCAGCAGCTTGTGCACAAA‑GCGCGGGGACGAGGGTGTGGATAACCTATGGAGATGTCTCTGCAGGCCAGGCGCTACATGACCTGCa                                                                                                                        <  6:328615/149‑1 (MQ=255)                              gagcatttgtcgtcgagcaccctggcggccttcatgttcatctgggcaggtttggcgatttacagcgtcgatgcatggctgaacttgcgcaaacgtagctgatcagaaaacgatcaaaaCTCTGCAGGCCAGGCGCTACATGACCTg                                                                                                                          <  2:44223‑M1/28‑1 (MQ=255)                               agcatttgtcgtcgagcaccctggcggccttcatgttcatctgggcaggtttggcgatttacagcgtcgatgcatggctgaacttgcgcaaacgtagctgatcagaaaacgatcaaaaCTCTGCAGGCCAGGCGCTACATGACCTGCag                                                                                                                       >  3:26887‑M1/119‑149 (MQ=255)                                  ccTCTCCAGCCCAGGTATCACGTGCCTTGTACGGTTTTGCTCAAAAAATGCCCAATTATCAGCAGCTTGTGCACAAA‑GCGCGGGGACGAGGGTGTGGATAACCTATGGAGATGTCTCTGcaggc                                                                                                                                            <  6:174230/124‑1 (MQ=255)                                  ccTCTCCAGCCCAGGTATCACGTGCCTTGTACGGTTTTGCTCAAAAAATGCCCAATTATCAGCAGCTTGTGCACAAA‑GCGCGGGGACGAGGGTGTGGATAACCTATGGAGATGTCTCTGcaggc                                                                                                                                            >  5:174230/1‑124 (MQ=255)                                       tcgtcgagcaccctggcggccttcatgttcatctgggcaggtttggcgatttacagcgtcgatgcatggctgaacttgcgcaaacgtagctgatcagaaaacgatcaaaaCTCTGCAGGCCAGGCGCTACATGACCTGCAGAGTTTTGa                                                                                                               >  1:44223‑M1/111‑149 (MQ=255)                                       cacccccAGGTATCACGTGCCTTGTACGGTTTTGCTCAAAAAATGCCCAATTATCAGCAGCTTGTGCACAAA‑GCGCGGGGACGAGGGTGTGGATAACCTATGGAGATGTCTCTGCAGGCCAGGCGCTACATGACCTGCAGAGTTTTGa                                                                                                               <  7:74361/144‑1 (MQ=255)                                         gtcgagcaccctggcggccttcatgttcatctgggcaggtttggcgatttacagcgtcgatgcatggctgaacttgcgcaaacgtagctgatcagaaaacgatcaaaaCTCTGCAGGCCAGGCGCTACATGACCTGCAGAGTTTTGATc                                                                                                             <  4:256973‑M1/41‑1 (MQ=255)                                          gCCCAGGTATCACGTGCCTTGTACGGTTTTGCTCAAAAAATGCCCAATTATCAGCAGCTTGTGCACAAA‑GCGCGGGGACGAGGGTGTGGATAACCTATGGAGATGTCTCTGCAGGCCAGGCGCTACATGACCTGCAGAGTTTTGATCGt                                                                                                           >  4:161674/1‑149 (MQ=255)                                                   tCACGTGCCTTGTACGGTTTTGCTCAAAAAATGCCCAATTATCAGCAGCTTGTGCACAAA‑GCGCGGGGACGAGGGTGTGGATAACCTATGGAGATGTCTCTGCAGGCCAGGCGCTACATGACCTGCAGAGTTTTGATCGTTTTCTGAt                                                                                                   >  7:272983/1‑148 (MQ=255)                                                     acgtcttttGTTCTGTTTTTCTAAAAAATTGCCAATTTATCCCCATTTTGGTCACAAACTCGCGGGTACTAGGTGCCTGATAACCTATGGAGATGTCTCTGCAGGCCAGGCGCTACATGACCTGCAGAGTTTTGATCGTTTTCTGATCa                                                                                                 <  1:294335/142‑1 (MQ=255)                                                     aCGTGCCTTGTACGGTTTTGCTCAAAAAATGCCCAATTATCAGCAGCTTGTGCACAAA‑GCGCGGGGACGAGGGTGTGGATAACCTATGGAGATGTCTCTGCAGGCCAGGCGCTACATGACCTGCAGAGTTTTGATCGTTTTCTGATCAg                                                                                                >  6:27932/1‑149 (MQ=255)                                                       gTGCCTTGTACGGTTTTGCTCAAAAAATGCCCAATTATCAGCAGCTTGTGCACAAA‑GCGCGGGGACGAGGGTGTGGATAACCTATGGAGATGTCTCTGCAGGCCAGGCGCTACATGACCTGCAGAGTTTTGATCGTTTTCTGATCAGc                                                                                               >  3:337641/1‑148 (MQ=255)                                                       gTGCCTTGTACGGTTTTGCTCAAAAAATGCCCAATTATCAGCAGCTTGTGCACAAA‑GCGCGGGGACGAGGGTGTGGATAACCTATGGAGATGTCTCTGCAGGCCAGGCGCTACATGACCTGCAGAGTTTTGATCGTTTTCTGATCAGCt                                                                                              <  3:161674/149‑1 (MQ=255)                                                          ccTTGTACGGTTTTGCTCAAAAAATGCCCAATTATCAGCAGCTTGTGCACAAA‑GCGCGGGGACGAGGGTGTGGATAACCTATGGAGATGTCTCTGCAGGCCAGGCGCTACATGACCTGCAGAGTTTTGATCGTTTTCTGATCAGCTAc                                                                                            <  4:337641/148‑1 (MQ=255)                                                          ccTTGTACGGTTTTGCTCAAAAAATGCCCAATTATCAGCAGCTTGTGCACAAA‑GCGCGGGGACGAGGGTGTGGATAACCTATGGAGATGTCTCTGCAGGCCAGGCGCTACATGACCTGCAGAGTTTTGATCGTTTTCTGATCAGCTACg                                                                                           <  5:27932/149‑1 (MQ=255)                                                              gTACGTATTTGCTCAAAAAATGCCCAATTATCAGCATCTTGTGCACAAA‑GCTCGGGGACGAGTGGGTGTATAACCTATGGAGATGACTCTGCAGGCCAGGCGCTACATGACCTGCAGAGTTTTGATCGTTTTCTGATCAGCTACGttt                                                                                        <  6:349044/148‑1 (MQ=255)                                                                  ggTTTTGCTCAAAAAATGCCCAATTATCAGCAGCTTGTGCACAAA‑GCGCGGGGACGAGGGTGTGGATAACCTATGGAGATGTCTCTGCAGGCCAGGCGCTACATGACCTGCAGAGTTTTGATCGtttt                                                                                                        <  7:200862/128‑1 (MQ=255)                                                                  ggTTTTGCTCAAAAAATGCCCAATTATCAGCAGCTTGTGCACAAA‑GCGCGGGGACGAGGGTGTGGATAACCTATGGAGATGTCTCTGCAGGCCAGGCGCTACATGACCTGCAGAGTTTTGATCGtttt                                                                                                        >  8:200862/1‑128 (MQ=255)                                                                          tCAAAAAATGCCCAATTATCAGCAGCTTGTGCACAAA‑GCGCGGGGACGAGGGTGTGGATAACCTATGGAGATGTCTCTGCAGGCCAGGCGCTACATGACCTGCAGAGTTTTGATCGTTTTCTGATCAGCTACGTTTGCGCAAGTTCAGc                                                                           >  2:282775/1‑149 (MQ=255)                                                                            aaaaaaTGCCCAATTATCAGCAGCTTGTGCACAAA‑GCGCGGGGACGAGGGTGTGGATAACCTATGGAGATGTCTCTGCAGGCCAGGCGCTACATGACCTGCAGAGTTTTGATCGTTTTCTGATCAGCTACGTTTGCGCAAGTTCAGCCa                                                                         >  1:106947/1‑149 (MQ=255)                                                                             aaaaaTGCCCAATTATCAGCAGCTTGTGCACAAA‑GCGCGGGGACGAGGGTGTGGATAACCTATGGAGATGTCTCTGCAGGCCAGGCGCTACATGACCTGCAGAGTTTTGATCGTTTTCTGATCAGCTACg                                                                                           <  3:350517/130‑1 (MQ=255)                                                                             aaaaaTGCCCAATTATCAGCAGCTTGTGCACAAA‑GCGCGGGGACGAGGGTGTGGATAACCTATGGAGATGTCTCTGCAGGCCAGGCGCTACATGACCTGCAGAGTTTTGATCGTTTTCTGATCAGCTACg                                                                                           >  4:350517/1‑130 (MQ=255)                                                                                  tGCCCAATTATCAGCAGCTTGTGCACAAA‑GCGCGGGGACGAGGGTGTGGATAACCTATGGAGATGGCTCTGCAGGCCAGGCGCTACATGACCTGCAGAGTTTTGATCGTTTTCTGATCAGCTACGTTTGCGCAAGTTCAGCCATGCATc                                                                   <  7:264241/149‑1 (MQ=255)                                                                                      cAATTATCAGCAGCTTGTGCACAAA‑GCGCGGGGACGAGGGTGTGGATAACCTATGGAGATGTCTCTGCAGGCCAGGCGCTACATGACCTGCAGAGTTTTGATCGTTTTCTGATCAGCTACGTTTCCGCAAg                                                                                 >  7:319764/1‑131 (MQ=255)                                                                                                   cTTGTGCACAAA‑GCGCGGGGACGAGGGTGTGGATAACCTATGGAGATGTCTCTGCAGGCCAGGCGCTACATGACCTGCAGAGTTTTGATCGTTTTCTGATCAGCTACGTTTGCGCAAGTTCAGCCATGCATCGACGCTGTAAATCg                                                     <  6:189514/146‑1 (MQ=255)                                                                                                   cTTGTGCACAAA‑GCGCGGGGACGAGGGTGTGGATAACCTATGGAGATGTCTCTGCAGGCCAGGCGCTACATGACCTGCAGAGTTTTGATCGTTTTCTGATCAGCTACGTTTGCGCAAGTTCAGCCATGCATCGACGCTGTAAATCg                                                     >  5:189514/1‑146 (MQ=255)                                                                                                         cacaAA‑GCGCGGGGACGAGGGTGTGGATAACCTATGGAGATGTCTCTGCAGGCCAGGCGCTACATGACCTGCAGAGTTTTGATCGTTTTCTGATCAGCTACGttt                                                                                        <  7:334033/105‑1 (MQ=255)                                                                                                         cacaAA‑GCGCGGGGACGAGGGTGTGGATAACCTATGGAGATGTCTCTGCAGGCCAGGCGCTACATGACCTGCAGAGTTTTGATCGTTTTCTGATCAGCTACGttt                                                                                        >  8:334033/1‑105 (MQ=255)                                                                                                         cacaAA‑GCGCGGGGACGAGGGTGTGGATAACCTATGGAGATGTCTCTGCAGGCCAGGCGCTACATGACCTGCAGAGTTTTGATCGTTTTCTGATCAGCTACGTTTGCGCAAGTTCAGCCATGCATCGACGCTGTAAATCGCCAAACCTg                                            >  1:321991/1‑149 (MQ=255)                                                                                                                    ggggACGAGGGTGTGGATAACCTATGGAGATGTCTCTGCAGGCCAGGCGCTACATGACCTGCAGAGTTTTGATCGTTTTCTGATCAGCTACGTTTGCGCAAGTTCAGCCATGCATCGACGCTGTAAATCGCCAAACCTGCCCAGATGaa                                  <  2:106947/149‑1 (MQ=255)                                                                                                                      ggACGAGGGTGTGGATAACCTATGGAGATGTCTCTGCAGGCCAGGCGCTACATGACCTGCAGAGTTTTGATCGTTTTCTGATCAGCTACGTTTGCGCAAGTTCAGCCATGCATCGACGCTGTAAATCGCCAAAc                                               >  2:57118/1‑134 (MQ=255)                                                                                                                      ggACGAGGGTGTGGATAACCTATGGAGATGTCTCTGCAGGCCAGGCGCTACATGACCTGCAGAGTTTTGATCGTTTTCTGATCAGCTACGTTTGCGCAAGTTCAGCCATGCATCGACGCTGTAAATCGCCAAAc                                               <  1:57118/134‑1 (MQ=255)                                                                                                                        aCGAGGGTGTGGATAACCTATGGAGATGTCTCTGCAGGCCAGGCGCTACATGACCTGCAGAGTTTTGATCGTTTTCTGATCAGCTACGTTTGCGCAAGTTCAGCCATGCATCGACGCTGTAAATCGCCAAACCTGCCCAGATGAAc                                 <  3:338106/146‑1 (MQ=255)                                                                                                                        aCGAGGGTGTGGATAACCTATGGAGATGTCTCTGCAGGCCAGGCGCTACATGACCTGCAGAGTTTTGATCGTTTTCTGATCAGCTACGTTTGCGCAAGTTCAGCCATGCATCGACGCTGTAAATCGCCAAACCTGCCCAGATGAAc                                 >  4:338106/1‑146 (MQ=255)                                                                                                                        aCGAGGGTGTGGATAACCTATGGAGATGTCTCTGCAGGCCAGGCGCTACATGACCTGCAGAGTTTTGATCGTTTTCTGATCAGCTACGTTTGCGCAAGTTCAGCCATGCATCGACGCTGTAAATCGCCAAACCTGCCCAGATGAACAt                               >  3:171326/1‑148 (MQ=255)                                                                                                                        aCGAGGGTGTGGATAACCTATGGAGATGTCTCTGCAGGCCAGGCGCTACATGACCTGCAGAGTTTTGATCGTTTTCTGATCAGCTACGTTTGCGCAAGTTCAGCCATGCATCGACGCTGTAAATCGCCAAACCTGCCCAGATGAACAt                               >  5:195341/1‑148 (MQ=255)                                                                                                                          gAGGGTGTGGATAACCTATGGAGATGTCTCTGCAGGCCAGGCGCTACATGACCTGCAGAGTTTTGATCGTTTTCTGATCAGCTACGTTTGCGCAAGTTCAGCCATGCATCGACGCTGTAAATCGCCAAACCTGCCCAGATGAACATg                              >  4:36868/1‑147 (MQ=255)                                                                                                                           aGGGTGTGGATAACCTATGGAGATGTCTCTGCAGGCCAGGCGCTACATGACCTGCAGAGTTTTGATCGTTTTCTGATCAGCTACGTTTGCGCAAGTTCAGCCATGCATCGACGCTGTAAATCGCCAAACCTGCCCAGATGAACATGAAg                           <  1:282775/149‑1 (MQ=255)                                                                                                                              gtgtGGATAACCTATGGAGATGTCTCTGCAGGCCAGGCGCTACATGACCTGCAGAGTTTTGATCGTTTTCTGATCAGCTACGTTTGCGCAAGTTCAGCCATGCATCGACGCTGTAAATCGCCAAACCTGCCCAGATGAACATGAAGgcc                        <  8:272983/149‑1 (MQ=255)                                                                                                                                    tcagaaaacgatcaaaaCTCTGCAGGTCATGTAGCGCCTGGCCTGCAGAGTTTTGATCGTTTTCTGATCAGCTACGTTTGCGCAAGTTCAGCCATGCATCGACGCTGTAAATCGCCAAACCTGCCCAGATGAACATGAAGGCCGCCAgg                  <  3:256973‑M1/132‑1 (MQ=255)                                                                                                                                    aTAACCTATGGAGATGTCTCTGCAGGCCAGGCGCTACATGACCTGCAGAGTTTTGATCGTTTTCTGATCAGCTACGTTTGCGCAAGTTCAGCCATGCATCGACGCTGTAAATCGCCAAACCTGCCCAGATGAACATGAAGGCCGCCAgg                  <  6:195341/149‑1 (MQ=255)                                                                                                                                         cTATGGAGATGTCTCTGCAGGCCAGGCGCTACATGACCTGCAGAGTTTTGATCGTTTTCTGATCAGCTACGTTTGCGCAAGTTCAGCCATGCATCGACGCTGTAAATCGCCAAACCTGCCCAGATGAACATGaa                            <  4:196885/134‑1 (MQ=255)                                                                                                                                         cTATGGAGATGTCTCTGCAGGCCAGGCGCTACATGACCTGCAGAGTTTTGATCGTTTTCTGATCAGCTACGTTTGCGCAAGTTCAGCCATGCATCGACGCTGTAAATCGCCAAACCTGCCCAGATGAACATGaa                            >  3:196885/1‑134 (MQ=255)                                                                                                                                               agaTGTCTCTGCAGGCCAGGCGCTACATGACCTGCAGAGTTTTGATCGTTTTCTGATCAGCTACGTTTGCGCAAGTTCAGCCATGCATCGACGCTg                                                            >  2:70020/1‑96 (MQ=255)                                                                                                                                               agaTGTCTCTGCAGGCCAGGCGCTACATGACCTGCAGAGTTTTGATCGTTTTCTGATCAGCTACGTTTGCGCAAGTTCAGCCATGCATCGACGCTGTAAATCGCCAAACCTGCCCAGATGAACATGAAGGCCGCCAGGGTGCTcgacga       >  5:234300/1‑149 (MQ=255)                                                                                                                                                gaTGTCTCTGCAGGCCAGGCGCTACATGACCTGCAGAGTTTTGATCGTTTTCTGATCAGCTACGTTTGCGCAAGTTCAGCCATGCATCGACGCTGTAAATCTCCAAACCTGCCCAGATGAACATGAAGGCCGCCAGGGTGCTcgccga       >  2:272778/1‑148 (MQ=255)                                                                                                                                                     CTCTGCAGGCCAGGCGCTACATGACCTGCAGAGTTTTGATCGTTTTCTGATCAGCTACGTTTGCGCAAGTTCAGCCATGCATCGACGCTGTAAATCGCCAAACCTGCCCAGATGAACATGAAGGCCGCCAGGGTGCTCGACGACAAAt  >  4:171326‑M1/1‑148 (MQ=255)                                                                                                                                                     |                                                                                                                                                    CGGGGAAGGCCCTGTGGATAACCTGGGGGTGTACCTCTCCAGCCCAGGTATCACGTGCCTTGTACGGTTTTGCTCAAAAAATGCCCAATTATCAGCAGCTTGTGCACAAA‑GCGCGGGGACGAGGGTGTGGATAACCTATGGAGATGTCTCTGCAGGCCAGGCGCTACATGACCTGCAGAGTTTTGATCGTTTTCTGATCAGCTACGTTTGCGCAAGTTCAGCCATGCATCGACGCTGTAAATCGCCAAACCTGCCCAGATGAACATGAAGGCCGCCAGGGTGCTCGACGACAAAT  >  NC_002947/436203‑436497

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.