| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 436350 = | 48 (0.850) | 5 (0.090) | 5/242 | NT | 10.7% | intergenic (+183/+50) | PP_0357/PP_0358 | ACT domain‑containing protein/membrane protein |
| ? | NC_002947 | 436383 = | 39 (0.740) | intergenic (+216/+17) | PP_0357/PP_0358 | ACT domain‑containing protein/membrane protein | |||||
CCAGCCCAGGTATCACGTGCCTTGTACGGTTTTGCTCAAAAAATGCCCAATTATCAGCAGCTTGTGCACAAA‑GCGCGGGGACGAGGGTGTGGATAACCTATGGAGATGTCTCTGCAGGCCAGGCGCTACATGACCTGCAGAGTTTTGATCGTTTTCTGATCAGCTACGTTTGCGCAAGTTCAGCCATGCATCGACGCTGTAAATCGCCAAACCTGCCCAGATGAACATGAAGGCCGCCAGGGTGCTCGACGACAAATGCTCGTCGAACAGCACTACGGCCTGCAACAGCAC > NC_002947/436241‑436531 | tcgtcgagcaccctggcggccttcatgttcatctgggcaggtttggcgatttacagcgtcgatgcatggctgaacttgcgcaaacgtagctgatcagaaaacgatcaaaaCTCTGCAGGCCAGGCGCTACATGACCTGCAGAGTTTTGa > 1:44223‑M1/111‑149 (MQ=255)cacccccAGGTATCACGTGCCTTGTACGGTTTTGCTCAAAAAATGCCCAATTATCAGCAGCTTGTGCACAAA‑GCGCGGGGACGAGGGTGTGGATAACCTATGGAGATGTCTCTGCAGGCCAGGCGCTACATGACCTGCAGAGTTTTGa < 7:74361/144‑1 (MQ=255) gtcgagcaccctggcggccttcatgttcatctgggcaggtttggcgatttacagcgtcgatgcatggctgaacttgcgcaaacgtagctgatcagaaaacgatcaaaaCTCTGCAGGCCAGGCGCTACATGACCTGCAGAGTTTTGATc < 4:256973‑M1/41‑1 (MQ=255) gCCCAGGTATCACGTGCCTTGTACGGTTTTGCTCAAAAAATGCCCAATTATCAGCAGCTTGTGCACAAA‑GCGCGGGGACGAGGGTGTGGATAACCTATGGAGATGTCTCTGCAGGCCAGGCGCTACATGACCTGCAGAGTTTTGATCGt > 4:161674/1‑149 (MQ=255) cctggcggccttcatgttcatctgggcaggtttggcgatttacagcgtcgatgcatggctgaacttgcgcaaacgtagctgatcagaaaacgatcaaaactctgcaggccaggcgctacatgacctgcagagTTTTGATCGTTTTCTGa < 3:256973‑M2/17‑1 (MQ=255) tCACGTGCCTTGTACGGTTTTGCTCAAAAAATGCCCAATTATCAGCAGCTTGTGCACAAA‑GCGCGGGGACGAGGGTGTGGATAACCTATGGAGATGTCTCTGCAGGCCAGGCGCTACATGACCTGCAGAGTTTTGATCGTTTTCTGAt > 7:272983/1‑148 (MQ=255) acgtcttttGTTCTGTTTTTCTAAAAAATTGCCAATTTATCCCCATTTTGGTCACAAACTCGCGGGTACTAGGTGCCTGATAACCTATGGAGATGTCTCTGCAGGCCAGGCGCTACATGACCTGCAGAGTTTTGATCGTTTTCTGATCa < 1:294335/142‑1 (MQ=255) aCGTGCCTTGTACGGTTTTGCTCAAAAAATGCCCAATTATCAGCAGCTTGTGCACAAA‑GCGCGGGGACGAGGGTGTGGATAACCTATGGAGATGTCTCTGCAGGCCAGGCGCTACATGACCTGCAGAGTTTTGATCGTTTTCTGATCAg > 6:27932/1‑149 (MQ=255) gTGCCTTGTACGGTTTTGCTCAAAAAATGCCCAATTATCAGCAGCTTGTGCACAAA‑GCGCGGGGACGAGGGTGTGGATAACCTATGGAGATGTCTCTGCAGGCCAGGCGCTACATGACCTGCAGAGTTTTGATCGTTTTCTGATCAGc > 3:337641/1‑148 (MQ=255) gTGCCTTGTACGGTTTTGCTCAAAAAATGCCCAATTATCAGCAGCTTGTGCACAAA‑GCGCGGGGACGAGGGTGTGGATAACCTATGGAGATGTCTCTGCAGGCCAGGCGCTACATGACCTGCAGAGTTTTGATCGTTTTCTGATCAGCt < 3:161674/149‑1 (MQ=255) ccTTGTACGGTTTTGCTCAAAAAATGCCCAATTATCAGCAGCTTGTGCACAAA‑GCGCGGGGACGAGGGTGTGGATAACCTATGGAGATGTCTCTGCAGGCCAGGCGCTACATGACCTGCAGAGTTTTGATCGTTTTCTGATCAGCTAc < 4:337641/148‑1 (MQ=255) ccTTGTACGGTTTTGCTCAAAAAATGCCCAATTATCAGCAGCTTGTGCACAAA‑GCGCGGGGACGAGGGTGTGGATAACCTATGGAGATGTCTCTGCAGGCCAGGCGCTACATGACCTGCAGAGTTTTGATCGTTTTCTGATCAGCTACg < 5:27932/149‑1 (MQ=255) gTACGTATTTGCTCAAAAAATGCCCAATTATCAGCATCTTGTGCACAAA‑GCTCGGGGACGAGTGGGTGTATAACCTATGGAGATGACTCTGCAGGCCAGGCGCTACATGACCTGCAGAGTTTTGATCGTTTTCTGATCAGCTACGttt < 6:349044/148‑1 (MQ=255) ggTTTTGCTCAAAAAATGCCCAATTATCAGCAGCTTGTGCACAAA‑GCGCGGGGACGAGGGTGTGGATAACCTATGGAGATGTCTCTGCAGGCCAGGCGCTACATGACCTGCAGAGTTTTGATCGtttt < 7:200862/128‑1 (MQ=255) ggTTTTGCTCAAAAAATGCCCAATTATCAGCAGCTTGTGCACAAA‑GCGCGGGGACGAGGGTGTGGATAACCTATGGAGATGTCTCTGCAGGCCAGGCGCTACATGACCTGCAGAGTTTTGATCGtttt > 8:200862/1‑128 (MQ=255) tCAAAAAATGCCCAATTATCAGCAGCTTGTGCACAAA‑GCGCGGGGACGAGGGTGTGGATAACCTATGGAGATGTCTCTGCAGGCCAGGCGCTACATGACCTGCAGAGTTTTGATCGTTTTCTGATCAGCTACGTTTGCGCAAGTTCAGc > 2:282775/1‑149 (MQ=255) aaaaaaTGCCCAATTATCAGCAGCTTGTGCACAAA‑GCGCGGGGACGAGGGTGTGGATAACCTATGGAGATGTCTCTGCAGGCCAGGCGCTACATGACCTGCAGAGTTTTGATCGTTTTCTGATCAGCTACGTTTGCGCAAGTTCAGCCa > 1:106947/1‑149 (MQ=255) aaaaaTGCCCAATTATCAGCAGCTTGTGCACAAA‑GCGCGGGGACGAGGGTGTGGATAACCTATGGAGATGTCTCTGCAGGCCAGGCGCTACATGACCTGCAGAGTTTTGATCGTTTTCTGATCAGCTACg > 4:350517/1‑130 (MQ=255) aaaaaTGCCCAATTATCAGCAGCTTGTGCACAAA‑GCGCGGGGACGAGGGTGTGGATAACCTATGGAGATGTCTCTGCAGGCCAGGCGCTACATGACCTGCAGAGTTTTGATCGTTTTCTGATCAGCTACg < 3:350517/130‑1 (MQ=255) tGCCCAATTATCAGCAGCTTGTGCACAAA‑GCGCGGGGACGAGGGTGTGGATAACCTATGGAGATGGCTCTGCAGGCCAGGCGCTACATGACCTGCAGAGTTTTGATCGTTTTCTGATCAGCTACGTTTGCGCAAGTTCAGCCATGCATc < 7:264241/149‑1 (MQ=255) cAATTATCAGCAGCTTGTGCACAAA‑GCGCGGGGACGAGGGTGTGGATAACCTATGGAGATGTCTCTGCAGGCCAGGCGCTACATGACCTGCAGAGTTTTGATCGTTTTCTGATCAGCTACGTTTCCGCAAg > 7:319764/1‑131 (MQ=255) cTTGTGCACAAA‑GCGCGGGGACGAGGGTGTGGATAACCTATGGAGATGTCTCTGCAGGCCAGGCGCTACATGACCTGCAGAGTTTTGATCGTTTTCTGATCAGCTACGTTTGCGCAAGTTCAGCCATGCATCGACGCTGTAAATCg < 6:189514/146‑1 (MQ=255) cTTGTGCACAAA‑GCGCGGGGACGAGGGTGTGGATAACCTATGGAGATGTCTCTGCAGGCCAGGCGCTACATGACCTGCAGAGTTTTGATCGTTTTCTGATCAGCTACGTTTGCGCAAGTTCAGCCATGCATCGACGCTGTAAATCg > 5:189514/1‑146 (MQ=255) cacaAA‑GCGCGGGGACGAGGGTGTGGATAACCTATGGAGATGTCTCTGCAGGCCAGGCGCTACATGACCTGCAGAGTTTTGATCGTTTTCTGATCAGCTACGttt > 8:334033/1‑105 (MQ=255) cacaAA‑GCGCGGGGACGAGGGTGTGGATAACCTATGGAGATGTCTCTGCAGGCCAGGCGCTACATGACCTGCAGAGTTTTGATCGTTTTCTGATCAGCTACGttt < 7:334033/105‑1 (MQ=255) cacaAA‑GCGCGGGGACGAGGGTGTGGATAACCTATGGAGATGTCTCTGCAGGCCAGGCGCTACATGACCTGCAGAGTTTTGATCGTTTTCTGATCAGCTACGTTTGCGCAAGTTCAGCCATGCATCGACGCTGTAAATCGCCAAACCTg > 1:321991/1‑149 (MQ=255) ggggACGAGGGTGTGGATAACCTATGGAGATGTCTCTGCAGGCCAGGCGCTACATGACCTGCAGAGTTTTGATCGTTTTCTGATCAGCTACGTTTGCGCAAGTTCAGCCATGCATCGACGCTGTAAATCGCCAAACCTGCCCAGATGaa < 2:106947/149‑1 (MQ=255) ggACGAGGGTGTGGATAACCTATGGAGATGTCTCTGCAGGCCAGGCGCTACATGACCTGCAGAGTTTTGATCGTTTTCTGATCAGCTACGTTTGCGCAAGTTCAGCCATGCATCGACGCTGTAAATCGCCAAAc > 2:57118/1‑134 (MQ=255) ggACGAGGGTGTGGATAACCTATGGAGATGTCTCTGCAGGCCAGGCGCTACATGACCTGCAGAGTTTTGATCGTTTTCTGATCAGCTACGTTTGCGCAAGTTCAGCCATGCATCGACGCTGTAAATCGCCAAAc < 1:57118/134‑1 (MQ=255) aCGAGGGTGTGGATAACCTATGGAGATGTCTCTGCAGGCCAGGCGCTACATGACCTGCAGAGTTTTGATCGTTTTCTGATCAGCTACGTTTGCGCAAGTTCAGCCATGCATCGACGCTGTAAATCGCCAAACCTGCCCAGATGAAc < 3:338106/146‑1 (MQ=255) aCGAGGGTGTGGATAACCTATGGAGATGTCTCTGCAGGCCAGGCGCTACATGACCTGCAGAGTTTTGATCGTTTTCTGATCAGCTACGTTTGCGCAAGTTCAGCCATGCATCGACGCTGTAAATCGCCAAACCTGCCCAGATGAAc > 4:338106/1‑146 (MQ=255) aCGAGGGTGTGGATAACCTATGGAGATGTCTCTGCAGGCCAGGCGCTACATGACCTGCAGAGTTTTGATCGTTTTCTGATCAGCTACGTTTGCGCAAGTTCAGCCATGCATCGACGCTGTAAATCGCCAAACCTGCCCAGATGAACAt > 5:195341/1‑148 (MQ=255) aCGAGGGTGTGGATAACCTATGGAGATGTCTCTGCAGGCCAGGCGCTACATGACCTGCAGAGTTTTGATCGTTTTCTGATCAGCTACGTTTGCGCAAGTTCAGCCATGCATCGACGCTGTAAATCGCCAAACCTGCCCAGATGAACAt > 3:171326/1‑148 (MQ=255) gAGGGTGTGGATAACCTATGGAGATGTCTCTGCAGGCCAGGCGCTACATGACCTGCAGAGTTTTGATCGTTTTCTGATCAGCTACGTTTGCGCAAGTTCAGCCATGCATCGACGCTGTAAATCGCCAAACCTGCCCAGATGAACATg > 4:36868/1‑147 (MQ=255) aGGGTGTGGATAACCTATGGAGATGTCTCTGCAGGCCAGGCGCTACATGACCTGCAGAGTTTTGATCGTTTTCTGATCAGCTACGTTTGCGCAAGTTCAGCCATGCATCGACGCTGTAAATCGCCAAACCTGCCCAGATGAACATGAAg < 1:282775/149‑1 (MQ=255) gtgtGGATAACCTATGGAGATGTCTCTGCAGGCCAGGCGCTACATGACCTGCAGAGTTTTGATCGTTTTCTGATCAGCTACGTTTGCGCAAGTTCAGCCATGCATCGACGCTGTAAATCGCCAAACCTGCCCAGATGAACATGAAGgcc < 8:272983/149‑1 (MQ=255) tcagaaaacgatcaaaaCTCTGCAGGTCATGTAGCGCCTGGCCTGCAGAGTTTTGATCGTTTTCTGATCAGCTACGTTTGCGCAAGTTCAGCCATGCATCGACGCTGTAAATCGCCAAACCTGCCCAGATGAACATGAAGGCCGCCAgg < 3:256973‑M1/132‑1 (MQ=255) aTAACCTATGGAGATGTCTCTGCAGGCCAGGCGCTACATGACCTGCAGAGTTTTGATCGTTTTCTGATCAGCTACGTTTGCGCAAGTTCAGCCATGCATCGACGCTGTAAATCGCCAAACCTGCCCAGATGAACATGAAGGCCGCCAgg < 6:195341/149‑1 (MQ=255) cTATGGAGATGTCTCTGCAGGCCAGGCGCTACATGACCTGCAGAGTTTTGATCGTTTTCTGATCAGCTACGTTTGCGCAAGTTCAGCCATGCATCGACGCTGTAAATCGCCAAACCTGCCCAGATGAACATGaa > 3:196885/1‑134 (MQ=255) cTATGGAGATGTCTCTGCAGGCCAGGCGCTACATGACCTGCAGAGTTTTGATCGTTTTCTGATCAGCTACGTTTGCGCAAGTTCAGCCATGCATCGACGCTGTAAATCGCCAAACCTGCCCAGATGAACATGaa < 4:196885/134‑1 (MQ=255) gatcaaaactctgcaggtcatgtagcgcctggcctgcagagTTTTGATCGTTTTCTGATCAGCTACGTTTGCGCAAGTTCAGCCATGCATCGACGCTGTAAATCGCCAAACCTGCCCAGATGAACATGAAGGCCGCCAGGGTGCTcgac < 4:256973‑M2/108‑1 (MQ=255) tcaaaactctgcaggtcatgtagcgcctggcctgcagagTTTTGATCGTTTTCTGATCAGCTACGTTTGCGCAAGTTCAGCCATGCATCGACGCTGTAAATCGCCAAACCTGCCCAGATGAACATGAAGGCCGCCAGGGTGCTcgacga > 1:44223‑M2/40‑149 (MQ=255) agaTGTCTCTGCAGGCCAGGCGCTACATGACCTGCAGAGTTTTGATCGTTTTCTGATCAGCTACGTTTGCGCAAGTTCAGCCATGCATCGACGCTg > 2:70020/1‑96 (MQ=255) agaTGTCTCTGCAGGCCAGGCGCTACATGACCTGCAGAGTTTTGATCGTTTTCTGATCAGCTACGTTTGCGCAAGTTCAGCCATGCATCGACGCTGTAAATCGCCAAACCTGCCCAGATGAACATGAAGGCCGCCAGGGTGCTcgacga > 5:234300/1‑149 (MQ=255) gaTGTCTCTGCAGGCCAGGCGCTACATGACCTGCAGAGTTTTGATCGTTTTCTGATCAGCTACGTTTGCGCAAGTTCAGCCATGCATCGACGCTGTAAATCTCCAAACCTGCCCAGATGAACATGAAGGCCGCCAGGGTGCTcgccga > 2:272778/1‑148 (MQ=255) CTCTGCAGGCCAGGCGCTACATGACCTGCAGAGTTTTGATCGTTTTCTGATCAGCTACGTTTGCGCAAGTTCAGCCATGCATCGACGCTGTAAATCGCCAAACCTGCCCAGATGAACATGAAGGCCGCCAGGGTGCTCGACGACAAAt > 4:171326‑M1/1‑148 (MQ=255) TCTGCAGGCCAGGCGCTACATGACCTGCAGAGTTTTGATCGTTTTCTGATCAGCTACGTTTGCGCAAGTTCAGCCATGCATc < 1:103939‑M1/82‑1 (MQ=255) TCTGCAGGCCAGGCGCTACATGACCTGCAGAGTTTTGATCGTTTTCTGATCAGCTACGTTTGCGCAAGTTCAGCCATGCATc > 2:103939‑M1/1‑82 (MQ=255) ctgcaggtcatgtagcgcctggcctgcagagTTTTGATCGTTTTCTGATCAGCTACGTTTGCGCAAGTTCAGCCATGCATCGACGCTGTAAATCGCCAAACCTGCCCAGATGAACATGAAGGCCGCCAGGGTGCTCGACGACAAATGCt > 3:26887‑M2/32‑149 (MQ=255) CTGCAGGCCAGGCGCTACATGACCTGCAGAGTTTTGATCGTTTTCTGATCAGCTACGTTTGCGCAAGTTCAGCCATGCATCGACGCTGTAAATCGCCAAACCTGCCCAGATGAACATGAAGGCCGCCAGGGTGCTCGACGACAAATGCt < 6:73584‑M1/149‑1 (MQ=255) TGCAGGCCAGGCGCTACATGACCTGCAGAGTTTTGATCGTTTTCTGATCAGCTACGTTTGCGCAAGTTCAGCCATGCATCGACGCTGTAAATCGCCAAACCTGCCCAGATGAACATGAAGGCCGCCAGGGTGCTCGACGACAAATg > 4:199611‑M1/1‑146 (MQ=255) TGCAGGCCAGGCGCTACATGACCTGCAGAGTTTTGATCGTTTTCTGATCAGCTACGTTTGCGCAAGTTCAGCCATGCATCGACGCTGTAAATCGCCAAACCTGCCCAGATGAACATGAAGGCCGCCAGGGTGCTCGACGACAAATGCtc < 6:19816‑M1/149‑1 (MQ=255) caggtcatgtagcgcctggcctgcagagTTTTGATCGTTTTCTGATCAGCTACGTTTGCGCAAGTTCAGCCATGCATCGACGCTGTAAATCGCCAAACCTGCCCAGATGAACATGAAGGCCGCCAGGGTGCTCGACGACAAATGCtc < 2:44223‑M2/119‑1 (MQ=255) GGCCAGGCGCTACATGACCTGCAGAGTTTTGATCGTTTTCTGATCAGCTACGTTTGCGCAAGTTCAGCCATGCATCGACGCTGTAAATCGCCAAACCTGCCCAGATGAACATGAAGGCCGCCAGGGTGCTCGACGACAAATGCtcgtcg > 6:234300‑M1/1‑149 (MQ=255) GCCAGGCGCTACATGACCTGCAGAGTTTTGATCGTTTTCTGATCAGCTACGTTTGCGCAAGTTCAGCCATGCATCGACGCTGTAAATCGCCAAACCTGCCCAGATGAACATGAAGGCCGCCAGGGTGCTCGACGACAAATGCtcgtcg < 2:74118‑M1/148‑1 (MQ=255) cATGACCTGCAGAGTTTTGATCGTTTTCTGATCAGCTACGTTTGCGCAAGTTCAGCCATGCATCGACGCTGTAAATCGCCAAACCTGCCCAGATGAAc > 4:325333/1‑98 (MQ=255) cATGACCTGCAGAGTTTTGATCGTTTTCTGATCAGCTACGTTTGCGCAAGTTCAGCCATGCATCGACGCTGTAAATCGCCAAACCTGCCCAGATGAAc < 3:325333/98‑1 (MQ=255) ctgcagagTTTTGATCGTTTTCTGATCAGCTACGTTTGCGCAAGTTCAGCCATGCATCGACGCTGTAAATCGCCAAACCTGCCCAGATGAACATGAAGGCCGCCAGGGTGCTCGACGACAAATGCTCGTCGAACAGCACTACGGCCTGc < 3:36868‑M2/141‑1 (MQ=255) tgcagagTTTTGATCGTTTTCTGATCAGCTACGTTTGCGCAAGTTCAGCCATGCATCGACGCTGTAAATCGCCAAAACTGCCCAGATGAACATGAAGGCCGCCAGGGTGCTCGACGACAAATGCTCGTCGAACAGCACTACGGCCTGCa > 8:204671‑M2/8‑149 (MQ=255) cagagTTTTGATCGTTTTCTGATCAGCTACGTTTGCGCAAGTTCAGCCATGCATCGACGCTGTAAATCGCCAAACCTGCCCAGATGAACATGAAGGCCGCCAGGGTGCTCGACGACAAATGCTCGTCGAACAGCACTACGGCCTGCaa > 6:286509‑M2/6‑148 (MQ=255) gTTTTGATCGTTTTCTGATCAGCTACGTTTGCGCAAGTTCATCCATGCATCGACGCTGTAAATCGCCAAACCTGCCCAGATGAACATGAAGGCCGCCAGGGTGCTCGACGACAAATGCTCGTCGAACAGCACTACGGCCTGCAACAGCa < 2:321991‑M2/148‑1 (MQ=255) ttttGATCGTTTTCTGATCAGCTACGTTTGCGCAAGTTCAGCCATGCATCGACGCTGTAAATCGCCAAACCTGCCCAGATGAACATGAAGGCCGCCAGGGTGCTCGACGACAAATGCTCGTCGAACAGCACTACGGCCTGCAACAGCa < 5:19816/148‑1 (MQ=255) ttttGATCGTTTTCTGATCAGCTACGTTTGCGCAAGTTCAGCCATGCATCGACGCTGTAAATCGCCAAACCTGCCCAGATGAACATGAAGGCCGCCAGGGTGCTCGACGACAAATGCTCGTCGAACAGCACTACGGCCTGCAACAGCAc > 4:12259/1‑149 (MQ=255) | CCAGCCCAGGTATCACGTGCCTTGTACGGTTTTGCTCAAAAAATGCCCAATTATCAGCAGCTTGTGCACAAA‑GCGCGGGGACGAGGGTGTGGATAACCTATGGAGATGTCTCTGCAGGCCAGGCGCTACATGACCTGCAGAGTTTTGATCGTTTTCTGATCAGCTACGTTTGCGCAAGTTCAGCCATGCATCGACGCTGTAAATCGCCAAACCTGCCCAGATGAACATGAAGGCCGCCAGGGTGCTCGACGACAAATGCTCGTCGAACAGCACTACGGCCTGCAACAGCAC > NC_002947/436241‑436531 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |