New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 576284 | 42 (0.740) | 3 (0.060) | 3/248 | NT | 7.2% | coding (1321/3069 nt) | fdoG | formate dehydrogenase‑O major subunit |
? | NC_002947 | = 576306 | 37 (0.680) | coding (1343/3069 nt) | fdoG | formate dehydrogenase‑O major subunit |
AAGGTCTGGGAAGAGATCGCCTCCTGCTCGGTTCCGGGCAAGACCATGACGATCCTTTATGCGCTAGGTTGGACGCAGCATTCGATCGGTGCGCAGATTATCCGCAGTGCGGCCATGGTCCAGCTGTTGCTCGGCAACGTCGGCATGCCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/576134‑576284 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgcccgCGCAGGGCATTGACCCCGCCACCGGGCATGCCGACGTTGCCGAGCAACAGCTGGACCATGGCCGCACTGCGGATAATCTGCGCACCGATCGAATGCTGCGTCCAACCTAGCGCATAAAGGATCGTCATGGTCTTGCCCGGAACCGA < NC_002947/576306‑576161 AAGGTCTGGGAAGAGATCTCCTCCTGCTCGGTTCCGGGCAAGACCATGACGATCCTTTATGCGCTAGGTTGGACGCAGCATTCGATCGGTGCGCAGATTATCCGCAGTGCGGCCATGGTCCAGCTGTTGCTCGGCAACGTCGGCAT < 3:39461/146‑1 TCCGGGCAAGACCATGACGATCCTTTATGCGCTAGGTTGGACGCAGCATTCGATCGGTGCGCAGATTATCCGCAGTGCGGCCATGGGCCAGCTGTTGCTCGGCAACGTCGGCATGCCCGCGCAGGGCATTGACCCCGCCACCGGGCATG < 4:273335/149‑1 GCTAGGTTGGACGCAGCATTCGATCGGTGCGCAGATTATCCGCAGTGCGGCCATGGTCCAGCTGTTGCTCGGCAACGTCGGCATGCC > 5:13584/1‑87 GCTAGGTTGGACGCAGCATTCGATCGGTGCGCAGATTATCCGCAGTGCGGCCATGGTCCAGCTGTTGCTCGGCAACGTCGGCATGCC < 6:13584/87‑1 GCAGCATTCGATCGGTGCGCAGATTATCCGCAGTGCGGCCATGGTCCAGCTGTTGCTCGGCAACGTCGGCATGCCCGCGCAGGGCATTGACCCCGCCACCGGGCAT > 3:167714/1‑106 GCAGCATTCGATCGGTGCGCAGATTATCCGCAGTGCGGCCATGGTCCAGCTGTTGCTCGGCAACGTCGGCATGCCCGCGCAGGGCATTGACCCCGCCACCGGGCAT < 4:167714/106‑1 CCCGCGCAGGGCATTGACCCCGCCACCGGGCATGCCGACGTTGCCGAGCAACAGCTGGACCATGGCCGCACTGCGGATAATCTGCGCACCGATCGAATGCTGCGTCCAACCTAGCGCATAAAGGATCGTCATGGTCTTGCCCGGAA < 7:196319/146‑1 CCCGCGCAGGGCATTGACCCCGCCACCGGGCATGCCGACGTTGCCGAGCAACAGCTGGACCATGGCCGCACTGCGGATAATCTGCGCACCGATCGAATGCTGCGTCCAACCTAGCGCATAAAGGATCGTCATGGTCTTGCCCGGAA > 8:196319/1‑146 CCGCGCAGGGCATTGACCCCGCCACCGGGCATGCCGACGTTGCCGAGCAACAGCTGGACTATGGCCGCACTGCGTATAATCTGCGCACCGATCGAATGCTGCGTCCAACCTAGCGCATAAAGGATCGTCATGGTCTTGCCCGGAACCGA < 1:293210/149‑1 AAGGTCTGGGAAGAGATCGCCTCCTGCTCGGTTCCGGGCAAGACCATGACGATCCTTTATGCGCTAGGTTGGACGCAGCATTCGATCGGTGCGCAGATTATCCGCAGTGCGGCCATGGTCCAGCTGTTGCTCGGCAACGTCGGCATGCCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/576134‑576284 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgcccgCGCAGGGCATTGACCCCGCCACCGGGCATGCCGACGTTGCCGAGCAACAGCTGGACCATGGCCGCACTGCGGATAATCTGCGCACCGATCGAATGCTGCGTCCAACCTAGCGCATAAAGGATCGTCATGGTCTTGCCCGGAACCGA < NC_002947/576306‑576161 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |