New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 57628442 (0.740)3 (0.060) 3/248 NT 7.2% coding (1321/3069 nt) fdoG formate dehydrogenase‑O major subunit
?NC_002947 = 576306 37 (0.680)coding (1343/3069 nt) fdoG formate dehydrogenase‑O major subunit

TCGGTTCCGGGCAAGACCATGACGATCCTTTATGCGCTAGGTTGGACGCAGCATTCGATCGGTGCGCAGATTATCCGCAGTGCGGCCATGGTCCAGCTGTTGCTCGGCAACGTCGGCATGCCCGGTGGCGGGGTCAATGCCCTGCGCGGGCACTCCAACATCCAGGGCCTGACCGACCTCGGCCTGCTGTCCAACTCGCTGCCGGGCTACCTGACCCTGGCCGGTGACGCCGAGCAGGACTACGCCGCCTACATCGACAAGCGCGCTTCCAAGCCGCTGCGGCCTGGG  >  NC_002947/576161‑576448
                                                                                                                                                 |                                                                                                                                              
tCGGTTCCGGGCAAGACCATGACGATCCTTTATGCGCTAGGTTGGACGCAGCATTCGATCGGTGCGCAGATTATACGCAGTGCGGCCATAGTCCAGCTGTTGCTCGGCAACGTCGGCATGCCCGGTGGCGGGGTCAATGCCCTGCGcgg                                                                                                                                             <  1:293210‑M2/149‑4 (MQ=255)
    ttCCGGGCAAGACCATGACGATCCTTTATGCGCTAGGTTGGACGCAGCATTCGATCGGTGCGCAGATTATCCGCAGTGCGGCCATGGTCCAGCTGTTGCTCGGCAACGTCGGCATGCCCGGTGGCGGGGTCAATGCCCTGCGcggg                                                                                                                                            >  8:196319‑M2/1‑142 (MQ=255)
    ttCCGGGCAAGACCATGACGATCCTTTATGCGCTAGGTTGGACGCAGCATTCGATCGGTGCGCAGATTATCCGCAGTGCGGCCATGGTCCAGCTGTTGCTCGGCAACGTCGGCATGCCCGGTGGCGGGGTCAATGCCCTGCGcggg                                                                                                                                            <  7:196319‑M2/146‑5 (MQ=255)
      ccGGGCAAGACCATGACGATCCTTTATGCGCTAGGTTGGACGCAGCATTCGATCGGTGCGCAGATTATCCGCAGTGCGGCCATGGTCCAGCTGTTGCTCGGCAACGTCGGCATGCCCGGTGGCGGGGTCAATGCCCTGCGCGGGCAc                                                                                                                                         <  1:217759/147‑1 (MQ=255)
      ccGGGCAAGACCATGACGATCCTTTATGCGCTAGGTTGGACGCAGCATTCGATCGGTGCGCAGATTATCCGCAGTGCGGCCATGGTCCAGCTGTTGCTCGGCAACGTCGGCATGCCCGGTGGCGGGGTCAATGCCCTGCGCGGGCAc                                                                                                                                         >  2:217759/1‑147 (MQ=255)
          gCAAGACCATGACGATCCTTTATGCGCTAGGTTGGACGCAGCATTCGATCGGTGCGCAGATTATCCGCAGTGCGGCCATGGTCCAGCTGTTGCTCGGCAACGTCGGCATGCCCGGTGGCGGGGTCAATGCCCTGCGCGGGCACTCCAAc                                                                                                                                   <  7:210532/149‑1 (MQ=255)
              gACCATGACGATCCTTTATGCGCTAGGTTGGACGCAGCATTCGATCGGTGCGCAGATTATCCGCAGTGCGGCCATGGTCCAGCTGTTGCTCGGCAACGTCGGCATGCCCGGTGGCGGGGTCAATGCCCTGCGCGGGCACTCCAACATc                                                                                                                                >  5:358967/1‑148 (MQ=255)
                   tGACGATCCTTTATGCGCTAGGTTGGACGCAGCATTCGATCGGTGCGCAGATTATCCGCAGTGCGGCCATGGTCCAGCTGTTGCTCGGCAACGTCGGCATGCCCGGTGGCGGGGTCAATGCCCTGCGCGGGCACTCCAACATCCAGGGc                                                                                                                          <  5:179196/149‑1 (MQ=255)
                       gATCCTTTATGCGCTAGGTTGGACGCAGCATTCGATCGGTGCGCAGATTATCCGCAGTGCGGCCATGGTCCAGCTGTTGCTCGGCAACGTCGGCATGCCCGGTGGCGGGGTCAATGCCCTGCGCGGGCACTCCAACATCCAGGGCCTga                                                                                                                      >  1:324654/1‑149 (MQ=255)
                           cTTTATGCGCTAGGTTGGACGCAGCATTCGATCGGTGCGCAGATTATCCGCAGTGCGGCCATGGTCCAGCTGTTGCTCGGCAACGTCGGCATGCCCGGTGGCGGGGTCAATGCCCTGCGCGGGCACTCCAACATCCAGGGCCTgaccga                                                                                                                  >  8:73992/1‑149 (MQ=255)
                           cTTTATGCGCTAGGTTGGACGCAGCATTCGATCGGTGCGCAGATTATCCGCAGTGCGGCCATGGTCCAGCTGTTGCTCGGCAACGTCGGCATGCCCGGTGGCGGGGTCAATGCCCTGCGCGGGCACTCCAACATCCAGGGCCTgaccga                                                                                                                  >  1:40701/1‑149 (MQ=255)
                            tttATGCGCTAGGTTGGACGCAGCATTCGATCGGTGCGCAGATTATCCGCAGTGCGGCCATGGTCCAGCTGTTGCTCGGCAACGTCGGCATGCCCGGTGGCGGGGTCAATGCCCTGCGCGGGCACTCCAACATCCAGGGCCTgaccgac                                                                                                                 >  2:194700/1‑149 (MQ=255)
                            tttATGCGCTAGGTTGGACGCAGCATTCGATCGGTGCGCAGATTATCCGCAGTGCGGCCATGGTCCAGCTGTTGCTCGGCAACGTCGGCACGCCCGGTGGCGGGGTCAATGCCCTGCGCGGGCACTCCAACATCCAGGGCCTgaccgac                                                                                                                 >  4:139323/1‑149 (MQ=255)
                                 gcgcTAGGTTGGACGCAGCATTCGATCGGTGCGCAGATTATCCGCAGTGCGGCCATGGTCCAGCTGTTGCTCGGCAACGTCGGCATGCCCGGTGGCGGGGTCAATGCCCTGCGCGGGCACTCCAACATCCAGGGCCTGACCGACCTCgg                                                                                                            >  5:231114/1‑149 (MQ=255)
                                   gcTAGGTTGGACGCAGCATTCGATCGGTGCGCAGATTATCCGCAGTGCGGCCATGGTCCAGCTGTTGCTCGGCAACGTCGGCATGCCCGGTGGCGGGGTCAATGCCCTGCGCGGGCACTCCAACATCCAGGGCCTGACCGACCTCGGcc                                                                                                          >  3:151504/1‑149 (MQ=255)
                                       ggTTGGACGCAGCATTCGATCGGTGCGCAGATTATCCGCAGTGCGGCCATGGTCCAGCTGTTGCTCGGCAACGTCGGCATGCCCGGTGGCGGGGTCAATGCCCTGCGCGGGCACTCCAACATCCAGGGCCTGACCGACCTCGGCctg                                                                                                        <  1:194700/147‑1 (MQ=255)
                                           ggACGCAGCATTCGATCGGTGCGCAGATTATCCGCAGTGCGGCCATGGTCCAGCTGTTGCTCGGCAACGTCGGCATGCCCGGTGGCGGGGTCAATGCCCTGCGCGGGCACTCCAACATCCAGGGCCTGACCGACCTCGGCCTGCTGTc                                                                                                   <  6:358967/148‑1 (MQ=255)
                                              cGCAGCATTCGATCGGTGCGCAGATTATCCGCAGTGCGGCCATGGTCCAGCTGTTGCTCGGCAACGTCGGCATGCCCGGTGGCGGGGTCAATGCCCTGCGCGGGCACTCCAACATCCAGGGCCTGACCGACCTCGGCCTGCTGTCCAAc                                                                                               >  2:274103/1‑149 (MQ=255)
                                                 agcaTTCGATCGGTGCGCAGATTATCCGCAGTGCGGCCATGGTCCAGCTGTTGCTCGGCAACGTCGGCATGCCCGGTGGCGGGGTCAATGCCCTGCGCGGGCATTCCAACATCCAGGGCCTGACCGACCTCGGCCTGCTGTCCAACTCg                                                                                            >  4:55224/1‑149 (MQ=255)
                                                  gcaTTCGATCGGTGCGCAGATTATCCGCAGTGCGGCCATGGTCCAGCTGTTGCTCGGCAACGTCGGCATGCCCGGTGGCGGGGTCAATGCCCTGCGCGGGCACTCCAACATCCAGGGCCTGACCGACCTCGGCCTGCTGTCCAACTCGc                                                                                           >  1:87252/1‑149 (MQ=255)
                                                        gATCGGTGCGCAGATTATCCGCAGTGCGGCCATGGTCCAGCTGTTGCTCGGCAACGTCGGCATGCCCGGTGGCGGGGTCAATGCCCTGCGCGGGCACTCCAACATCCAGGGCCTGACCGACCTCGGCCTGCTGTCCAACTCGCTGCTgg                                                                                     >  7:21734/1‑149 (MQ=255)
                                                        gATCGGTGCGCAGATTATCCGCAGTGCGGCCATGGTCCAGCTGTTGCTCGGCAACGTCGGCATGCCCGGTGGCGGGGTCAATGCCCTGCGCGGGCACTCCAACATCCAGGGCCTGACCGACCTCGGCCTGCTGTCCAACTCGCTGCCg                                                                                      <  2:324654/148‑1 (MQ=255)
                                                        gATCGGTGCGCAGATTATCCGCAGTGCGGCCATGGTCCAGCTGTTGCTCGGCAACGTCGGCACGCCCGGTGGCGGGGTCAATGCCCTGCGCGGGCACTCCAACATCCAGGGCCTGACCGACCTCGGCCTGCTGTCCAACTCGCTGCCg                                                                                      <  3:139323/148‑1 (MQ=255)
                                                             gTGCGCAGATTATCCGCAGTGCGGCCATGGTCCAGCTGTTGCTCGGCAACGTCGGCATGCCCGGTGGCGGGGTCAATGCCCTGCGCGGGCACTCCAACATCCAGGGCCTGACCGACCTCGGCCTGCTGTCCAACTCGCTGCCGGGCTAc                                                                                <  6:231114/149‑1 (MQ=255)
                                                              tGCGCAGATTATCCGCAGTGCGGCCATGGTCCAGCTGTTGCTCGGCAACGTCGGCATGCCCGGTGGCGGGGTCAATGCCCTGCGCGGGCATTCCAACATCCAGGGCCTGACCGACCTCGGCCTGCTGTCCAACTCGCTGCCGGGCTAcc                                                                               <  3:55224/149‑1 (MQ=255)
                                                                            gCAGTGCGGCCATGGTCCAGCTGTTGCTCGGCAACGTCGGCATGCCCGGTGGCGGGGTCAATGCCCTGCGCGGGCACTCCAACATCCAGGGCCTGACCGACCTCGGCCTGCTGTCCAACTCGCTGCTGGGCTACCTGACCCTGGCCGGt                                                                 <  8:21734/149‑1 (MQ=255)
                                                                            gCAGTGCGGCCATGGTCCAGCTGTTGCTCGGCAACGTCGGCATGCCCGGTGGCGGGGTCAATGCCCTGCGCGGGCACTCCAACATCCAGGGCCTGACCGACCTCGGCCTGCTGTCCAACTCGCTGCCGGGCTACCTGACCCTGGCCGGt                                                                 >  2:355340/1‑149 (MQ=255)
                                                                            gCAGTGCGGCCATGGTCCAGCTGTTGCTCGGCAACGTCGGCATGCCCGGTGGCGGGGTCAATGCCCTGCGCGGGCACTCCAACATCCAGGGCCTGACCGACCTCGGCCTGCTGTCCAACTCGCTGCCGGGCTACCTGACCCTGGCCGGt                                                                 <  7:73992/149‑1 (MQ=255)
                                                                              aGTGCGGCCATGGTCCAGCTGTTGCTCGGCAACGTCGGCATGCCCGGTGGCGGGGTCAATGCCCTGCGCGGGCACTCCAACATCCAGGGCCTGACCGACCTCGGCCTGCTGTCCAACTCGCTGCCGGGCTACCTGACCCTGGCCGGTGa                                                               <  2:40701/149‑1 (MQ=255)
                                                                                       aTGGTCCAGCTGTTGCTCGGCAACGTCGGCATGCCCGGTGGCGGGGTCAATGCCCTGCGCGGGCACTCCAACATCCAGGGCCTGACCGACCTCGGCCTGCTGTCCAACTCGCTGCCGGGCTACCTGACCCTGGCCGGTGACGCCGAg                                                        >  2:292374/1‑147 (MQ=255)
                                                                                          gTCCAGCTGTTGCTCGGCAACGTCGGCATGCCCGGTGGCGGGGTCAATGCCCTGCGCGGGCACTCCAACATCCAGGGCCTGACCGACCTCGGCCTGCTGTCCAACTCGCTGCCGGGCTACCTGACCCTGGCCGGTGACGCCGAGCAGGa                                                   <  2:293210/149‑1 (MQ=255)
                                                                                                      cTCGGCAACGTCGGCATGCCCGGTGGCGGGGTCAATGCCCTGCGCGGGCACTCCAACATCCAGGGCCTGACCGACCTCGGCCTGCTGTCCAACTCGCTGCCGGGCTACCTGACCCTGGCCGGTGACGCCGAGCAGGACTACGCCGCCTa                                       >  8:159942/1‑149 (MQ=255)
                                                                                                         ggCAACGTCGGCATGCCCGGTGGCGGGGTCAATGCCCTGCGCGGGCACTCCAACATCCAGGGCCTGACCGACCTCGGCCTGCTGTCCAACTCGCTGCCGGGCTACCTGACCCTGGCCGGTGACGCCGAGCAGGACTACGCCGCCTACAt                                    >  6:369601/1‑149 (MQ=255)
                                                                                                             aCGTCGGCATGCCCGGTGGCGGGGTCAATGCCCTGCGCGGGCACTCCAACATCCAGGGCCTGACCGACCTCGGCCTGCTGTCCAACTCGCTGCCGGGCTACCTGACCCTGGCCGGTGCCGCCGAGCAGGACTACGCCGCCTACATCGa                                 >  4:193647/1‑148 (MQ=255)
                                                                                                               gTCGGCATGCCCGGTGGCGGGGTCAATGCCCTGCGCGGGCACTCCAACATCCAGGGCCTGACCGACCTCGGCCTGCTGTCCAACTCGCTGCCGGGCTACCTGACCCTGGCCGGTGACGCCGAGCAGGACTACGCCGCCTACATCGAc                                >  3:334763/1‑147 (MQ=255)
                                                                                                                 cGGCATGCCCGGTGGCGGGGTCAATGCCCTGCGCGGGCACTCCAACATCCAGGGCCTGACCGACCTCGGCCTGCTGTCCAACTCGCTGCCGGGCTACCTGACCCTGGCCGGTGACGCCGAGCAGGACTACGCCGCCTACATCGACAAgc                            <  7:159942/149‑1 (MQ=255)
                                                                                                                    cATGCCCGGTGGCGGGGTCAATGCCCTGCGcgggcatgccgacgttgccgagcaacagctggcccatggccgcactgcggataatctgcgcaccgatcgaatgctgcgtccaacctagcgcataaaggatcgtcatggtcttgcccgga                         <  4:273335‑M2/149‑120 (MQ=255)
                                                                                                                    cATGCCCGGTGGCGGGGTCAATGCCCTGCGCGGGCACTCCAACATCCAGGGCCTGACCGACCTCGGCCTGCTGTCCAACTCGCTGCCGGGCTACCTGACCCTGGc                                                                     <  1:22404/105‑1 (MQ=255)
                                                                                                                    cATGCCCGGTGGCGGGGTCAATGCCCTGCGCGGGCACTCCAACATCCAGGGCCTGACCGACCTCGGCCTGCTGTCCAACTCGCTGCCGGGCTACCTGACCCTGGc                                                                     >  2:22404/1‑105 (MQ=255)
                                                                                                                     aTGCCCGGTGGCGGGGTCAATGCCCTGCGcgggcatgccgacgttgccgagcaacagctggaccatggccgcactgcggataatctgcgcaccgatcgaatgctgc                                                                   >  3:167714‑M2/1‑29 (MQ=255)
                                                                                                                     aTGCCCGGTGGCGGGGTCAATGCCCTGCGcgggcatgccgacgttgccgagcaacagctggaccatggccgcactgcggataatctgcgcaccgatcgaatgctgc                                                                   <  4:167714‑M2/106‑78 (MQ=255)
                                                                                                                      tGCCCGGTGGCGGGGTCAATGCCCTGCGCGGGCACTCCAACATCCAGGGCCTGACCGACCTCGGCCTGCTGTCCAACTCGCTGCCGGGCTACCTGACCCTGGCCGGTGACGCCGAGCAGGACTACGCCGCCTACATCGACAAGCGCGCt                       <  1:274103/149‑1 (MQ=255)
                                                                                                                                       aaTGCCCTGCGCGGGCACTCCAACATCCAGGGCCTGACCGACCTCGGCCTGCTGTCCAACTCGCTGCCGGGCTACCTGACCCTGGCCGGTGACGCCGAGCAGGACTACGCCGCCTACATCGACAAGCGCGCTTCCAAGCCGCTGCGGcc      >  7:199329/1‑149 (MQ=255)
                                                                                                                                          gCCCTGCGCGGGCACTCCAACATCCAGGGCCTGACCGACCTCGGCCTGCTGTCCAACTCGCTGCCGGGCTACCTGACCCTGGCCGGTGACGCCGAGCAGGACTACGCCGCCTACATCGACAAGCGCGCTTCCAAGCCGCTGCGGCCTgg   <  5:369601/149‑1 (MQ=255)
                                                                                                                                            ccTGCGCGGGCACTCCAACATCCAGGGCCTGACCGACCTCGGCCTGCTGTCCAACTCGCTGCCGGGCTACCTGACCCTGGCCGGTGACGCCGAGCAGGACTACGCCGCCTACATCGACAAGCGCGCTTCCAAGCCGCTGCGGCCTggg  >  5:177117/1‑148 (MQ=255)
                                                                                                                                                 |                                                                                                                                              
TCGGTTCCGGGCAAGACCATGACGATCCTTTATGCGCTAGGTTGGACGCAGCATTCGATCGGTGCGCAGATTATCCGCAGTGCGGCCATGGTCCAGCTGTTGCTCGGCAACGTCGGCATGCCCGGTGGCGGGGTCAATGCCCTGCGCGGGCACTCCAACATCCAGGGCCTGACCGACCTCGGCCTGCTGTCCAACTCGCTGCCGGGCTACCTGACCCTGGCCGGTGACGCCGAGCAGGACTACGCCGCCTACATCGACAAGCGCGCTTCCAAGCCGCTGCGGCCTGGG  >  NC_002947/576161‑576448

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.