New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 1006304 | 45 (0.790) | 3 (0.060) | 3/248 | NT | 6.3% | coding (1234/2430 nt) | PP_0867 | FecA‑like outer membrane receptor |
? | NC_002947 | = 1006326 | 46 (0.850) | coding (1256/2430 nt) | PP_0867 | FecA‑like outer membrane receptor |
AACCCGTACCAGTCGCTGCGCGATTACGACTACTTCGCGGGCCGGCGCAAGGATGTGTCGTTCAAATGGCAGCGGCAGCTCGACGATGCCACCCAGTTCGAAGTGCTGACCTACTACACCGACAGCTTCCGCGGCAGCACAATAGCCTCGCGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1006151‑1006304 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcgggTACGACGACAACGTCTTCATGTCCCGCGAGGCTATTGTGCTGCCGCGGAAGCTGTCGGTGTAGTAGGTCAGCACTTCGAACTGGGTGGCATCGTCGAGCTGCCGCTGCCATTTGAACGACACATCCTTGCGCCGGCCCGCGAAGTAGT < NC_002947/1006326‑1006179 AACCCGTACCAGTCGCTGCGCGATTACGACTACTTCGCGGGCCGGCGCAAGGATGTGTCGTTCAAATGGCAGCGGCAGCTCGACGATGCCACCCAGTTCGAAGTGCTGACCTACTACACCGACAGCTTCCGCGGCAGCACAATAGCCTC < 1:121472/149‑1 CGTACCAGTCGCTGCGCGATTACGACTACTTCGCGGGCCGGCGCAAGGATGTGTCGTTCAAATGGCAGCGGCAGCTCGACGATGCCACCCAGTTCGAAGTGCTGACCTACTACACCGACAGCTTCCGCGGCAGCACAATAGCCTCGCGG < 4:122864/149‑1 GTCGCTGCGCGATTACGACTACTTCGCGGGCCGGCGCAAGGATGTGTCGTTCAAATGGCAGCGGCAGCTCGACGATGCCACCCAGTACGAAGTGCTGACCTACTAAACCGACAGCATCCGCGGCAGCACAATAGCCTCGCGGGccat > 8:322201/1‑143 TGCGCGATTACGACTACTTCGCGGGCCGGCGCAAGGATGTGTCGTTCAAATGGCAGCGGCAGCTCGACGATGCCACCCAGTTCGAAGTGCTGACCTACTACAGCGACAGCTTCCGCGGCAGCACAATAGCCTCGCGG > 8:176026/1‑137 TGCGCGATTACGACTACTTCGCGGGCCGGCGCAAGGATGTGTCGTTCAAATGGCAGCGGCAGCTCGACGATGCCACCCAGTTCGAAGTGCTGACCTACTACACCGACAGCTTCCGCGGCAGCACAATAGCCTCGCGG < 7:176026/137‑1 GCGGGCCGGCGCAAGGATGTGTCGTTCAAATGGCAGCGGCAGCTCGACGATGCCACCCAGTTCGAAGTGCTGACCTACTACACCGACAGCTTCCGCGGCAGCACAATAGCCTCGCGGGTACGACGACAACGTCTTCATGTCCCGCGAG < 6:309439/148‑1 GTTCAAATGGCAGCGGCAGCTCGACGATGCCACCCAGTTCGAAGTGCTGACCTACTACACCGACAGCTTCCGCGGCAGCACAATAGCCTCGCGGGTACGACGACAACGTCTTCATGTCCCGCGAGGCTA > 7:56992/1‑129 GTTCAAATGGCAGCGGCAGCTCGACGATGCCACCCAGTTCGAAGTGCTGACCTACTACACCGACAGCTTCCGCGGCAGCACAATAGCCTCGCGGGTACGACGACAACGTCTTCATGTCCCGCGAGGCTA < 8:56992/129‑1 TTCAAATGGCAGCGGCAGCTCGACGATGCCACCCAGTTCGAAGTGCTGACCTACTACACCGACAGCTTCCGCGGCAGCACAATAGCCTCGCG < 6:172079/92‑1 GTACGACGACAACGTCTTCATGTCCCGCGAGGCTATTGTGCTGCCGCGGAAGCTGTCGGTGTAGTAGGTCAGCACTTCGAACTGGGTGGCATCGTCGAGCTGCCGCTGCCATTTGAACGACACATCCTTGCGCCGGCCCGCGAAGTAGT > 1:224001/1‑149 AACCCGTACCAGTCGCTGCGCGATTACGACTACTTCGCGGGCCGGCGCAAGGATGTGTCGTTCAAATGGCAGCGGCAGCTCGACGATGCCACCCAGTTCGAAGTGCTGACCTACTACACCGACAGCTTCCGCGGCAGCACAATAGCCTCGCGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1006151‑1006304 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcgggTACGACGACAACGTCTTCATGTCCCGCGAGGCTATTGTGCTGCCGCGGAAGCTGTCGGTGTAGTAGGTCAGCACTTCGAACTGGGTGGCATCGTCGAGCTGCCGCTGCCATTTGAACGACACATCCTTGCGCCGGCCCGCGAAGTAGT < NC_002947/1006326‑1006179 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |