| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1055733 = | 43 (0.760) | 3 (0.060) | 3/248 | NT | 7.1% | coding (99/1332 nt) | PP_0913 | hypothetical protein |
| ? | NC_002947 | 1055773 = | 37 (0.680) | coding (59/1332 nt) | PP_0913 | hypothetical protein | |||||
CACGGCGCACGGTCCACCCCTTTGGTCCAACCACACGATGCAGGAAAACCAATAATGATTCGAATGCCTCTGGCCTCCGCCAGTCTGCTGGCCATTGCCATCGCCCTCGCCGGTTGCGGTGAAGGCAAGGACGAAAAAGCCGCCGCGCCGCAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1055885‑1055733‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgcaaCCGGCGAGGGCGATGGCAATGGCCAGCAGACTGGCGGAGGCCAGAGGCATTCGAATCATTATTGGTTTTCCTGCATCGTGTGGTTGGACCAAAGGGGTGGACCGTGCGCCGTGGCACGCAAAACTACAACATCATGCGAAAGATTTGC > NC_002947/1055773‑1055920 CACGGCGCACGGTCCACCCCTTTGGTCCAACCACACGATGCAGGAAAACCAATAATGATTCGAATGCCTCTGGCCTCCGCCAGTCTGCTGGCCATTGCCATCGCCCTCGCCGGTTGCGGTGAAGGCAAGGACGAAAAAGCCGCCGCGCC < 1:360774/149‑1 CGGCGCACGGTCCACCCCTTTGGTCCAACCACACGATGCAGGAAAACCAATAATGATTCGAATGCCTCTGGCCTCCGCCAGTCTGCTGGCCATTGCCATCGCCCTCGGCGGTTGCGGTGAAGGCAAGGACGAAAAAGCCGCCGCGCCG > 3:260977/1‑148 CCCCTTTGGTCCAACCACACGATGCAGGAAAACCAATAATGATTCGAATGCCTCTGGCCTCCGCCAGTCTGCTGGCCATTGCCATCGCCCTCGCCGGTTGCGGTGAAGGCAAGGACGAAAAAGCCGCCGCGCC > 5:75385/1‑133 CCCCTTTGGTCCAACCACACGATGCAGGAAAACCAATAATGATTCGAATGCCTCTGGCCTCCGCCAGTCTGCTGGCCATTGCCATCGCCCTCGCCGGTTGCGGTGAAGGCAAGGACGAAAAAGCCGCCGCGCC < 6:75385/133‑1 CGGTTGCGGTGAAGGCAAGGACGAAAAAGCCGCCGCGCCGCAACCGGCGAGGGCGATGGCAATGGCCAGCAGACTGGCGGAGGCCAGAGGCATTCGAATCATTATTGGTTTTCCTGCATCGTGTGGTTGGAC < 5:143240/132‑1 CGGTTGCGGTGAAGGCAAGGACGAAAAAGCCGCCGCGCCGCAACCGGCGAGGGCGATGGCAATGGCCAGCAGACTGGCGGAGGCCAGAGGCATTCGAATCATTATTGGTTTTCCTGCATCGTGTGGTTGGAC > 6:143240/1‑132 TTGCGGTGAAGGCAAGGACGAAAAAGCCGCCGCGCCGCAACCGGCGAGGGCGATGGCAATGGCCAGCAGACTGGCGGAGGCCAGAGGCATTCGAATCATTATTGGTTTTCCTGCATCGTGTGGTTGGACCAAAGGGGTGGACCGTGCGC > 6:6236/1‑149 CCGCAACCGGCGAGGGCGATGGCAATGGCCAGCAGACTGGCGGAGGCCAGAGGCATTCGAATCATTATTGGTTTTCCTGCATCGTGGGGTTGGACCAAAGGGGTGGACCGTGCGCCGTGGCACGCAAAACTACAACATCATGCGAAAGA > 7:211656/1‑149 CAACCGGCGAGGGCGATGGCAATGGCCAGCAGACTGGCGGAGGCCAGAGGCATTCGAATCATTATTGGTTTTCCTGCATCGTGTGGTTGGACCAAAGGGGTGGACCGTGCGCCGTGGCACGCAAAACTACAACATCATGCGAAAGATTT < 5:6236/149‑1 CAACCGGCGAGGGCGATGGCAATGGCCAGCAGACTGGCGGAGGCCAGAGGCATTCGAATCATTATTGGTTTTCCTGCATCGTGTGGTTGGACCAAAGGGGTGGACCGTGCGCCGTGGCACGCAAAACTACAACATCATGCGAAAGATTT > 8:91910/1‑149 ACCGGCGAGGGCGATGGCAATGGCCAGCAGACTGGCGGAGGCCAGAGGCATTCGAATCATTATTGGTTTTCCTGCATCGTGTGGTTGGACCAAAGGGGTGGACCGTGCGCCGTGGCACGCAAAACTACAACATCATGCGAAAGATTTGC < 4:70177/149‑1 CACGGCGCACGGTCCACCCCTTTGGTCCAACCACACGATGCAGGAAAACCAATAATGATTCGAATGCCTCTGGCCTCCGCCAGTCTGCTGGCCATTGCCATCGCCCTCGCCGGTTGCGGTGAAGGCAAGGACGAAAAAGCCGCCGCGCCGCAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1055885‑1055733‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgcaaCCGGCGAGGGCGATGGCAATGGCCAGCAGACTGGCGGAGGCCAGAGGCATTCGAATCATTATTGGTTTTCCTGCATCGTGTGGTTGGACCAAAGGGGTGGACCGTGCGCCGTGGCACGCAAAACTACAACATCATGCGAAAGATTTGC > NC_002947/1055773‑1055920 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |