| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 1748247 | 43 (0.760) | 3 (0.060) | 3/242 | NT | 6.7% | coding (421/438 nt) | PP_1548 | hypothetical protein |
| ? | NC_002947 | = 1748274 | 43 (0.820) | coding (394/438 nt) | PP_1548 | hypothetical protein | |||||
TGCAGCCAACGAATGCGGCGTAGCGGGTGTCGCGCTCGGTCTGGTGGCCGTACCAGGCGCATGTCCCGTAGTCGATGCCGCGCATGGCCAGCCACACGACGGCGGCGACCATGATCCCGAAGGATGCGATACGGATCACAGATAGTCCTTGAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1748095‑1748247‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtccttgagAAGTCGGCGAAGCTGATGGGCCTCAGCCTCAAGGACTATCTGTGATCCGTATCGCATCCTTCGGGATCATGGTCGCCGCCGTCGTGTGGCTGGCCATGCGCGGCATCGACTACGGGAC < NC_002947/1748274‑1748157 TGCAGCCAACGAATGCGGCGTAGCGGGTGTCGCGCTCGGTCTGGTGGCCGTACCAGGCGCATGTCCCGTAGTCGATGCCGCGCATGGCCAGCCACACGACGGCGGCGACCATGATCCCGAAGGATGCGATACGGATCACAGATAGTCCT > 4:136744/1‑149TGCAGCCAACGAATGCGGCGTAGCGGGTGTCGCGCTCGGTCTGGTGGCCGTACCAGGCGCATGTCCCGTAGTCGATGCCGCGCATGGCCAGCCACACGACGGCGGCGACCATGATCCCGAAGGATGCGATACGGATCACAGATAGTCCT < 6:139473/149‑1 AGCCAACGAATGCGGCGTAGCGGGTGTCGCGCTCGGTCTGGTGGCCGTACCAGGCGCATGTCCCGTAGTCGATGCCGCGCATGGCCAGCCACACGACGGCGGCGACCATGATCCCGAAGGATGCGATACGGATCACAGATAGTCCTTGA < 6:247387/149‑1 AGCCAACGAATGCGGCGTAGCGGGTGTCGCGCTCGGTCTGGTGGCCGTACCAGGAGCATGTCCCGTAGTCGATGCCGCGCATGGCCAGCCACACGACGGCGGCGACCATGATCCCGAAGGATGCGATACGGATCACAGATAGTCCTTGA < 3:343010/149‑1 TCTGGTGGCCGTACCAGGCGCATGTCCCGTAGTCGATGCCGCGCATGGCCAGCCACACGACGGCGGCGACCATGATCCCGAAGGATGCGATACGGATCACAGATAGTCCTTGAGAAGTCGGCGAAGCTGATGGGCCTCAGCCTCAAGGA < 5:189132/149‑1 TGGCCGTACCAGGCGCATGTCCCGTAGTCGATGCCGCGCATGGCCAGCCACACGACGGCGGCGACCATGATCCCGAAGGATGCGATACGGATCACAGATAGTCCTTGAGAAGTCGGCGAAGCTGATGGGCCTCAGCCTCAAGGACTATC < 2:15283/149‑1 CCGTACCAGGCGCATGTCCCGTAGTCGATGCCGCGCATGGCCAGCCACACGACGGCGGCGACCATGATCCCGAAGGATGCGATACGGATCACAGATAGTCCTTGAGAAGTCGGCGAAGCTGATGGGCCTCAGCCTCAAGGACTATCTGT < 1:292148/149‑1 TTGAGAAGTCGGCGAAGCTGATGGGCCTCAGCCTCAAGGACTATCTGTGATCCGTATCGCATCCTTCGGGATCATGGTCGCCGCCGTCGTGTGGCTGGCCATGCGCGGCATCGACTACGGGAC < 7:138898/123‑1 TTGAGAAGTCGGCGAAGCTGATGGGCCTCAGCCTCAAGGACTATCTGTGATCCGTATCGCATCCTTCGGGATCATGGTCGCCGCCGTCGTGTGGCTGGCCATGCGCGGCATCGACTACGGGAC > 8:138898/1‑123 TGCAGCCAACGAATGCGGCGTAGCGGGTGTCGCGCTCGGTCTGGTGGCCGTACCAGGCGCATGTCCCGTAGTCGATGCCGCGCATGGCCAGCCACACGACGGCGGCGACCATGATCCCGAAGGATGCGATACGGATCACAGATAGTCCTTGAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1748095‑1748247‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtccttgagAAGTCGGCGAAGCTGATGGGCCTCAGCCTCAAGGACTATCTGTGATCCGTATCGCATCCTTCGGGATCATGGTCGCCGCCGTCGTGTGGCTGGCCATGCGCGGCATCGACTACGGGAC < NC_002947/1748274‑1748157 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |