New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2194395 =	49 (0.860)	5 (0.090)	5/256	NT	9.0%	coding (1270/2151 nt)	PP_1940	methyl‑accepting chemotaxis transducer
	?	NC_002947	2194436 =	53 (0.950)					coding (1229/2151 nt)	PP_1940	methyl‑accepting chemotaxis transducer

CCTCCGACTCGCCTATGAGAAACAAGATGAGTTGGGCGAGTTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/2194438‑2194395 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggAGGGTCAGATTGCCGTCGCCACTAGCGATGTCTCTCAGCATATATGCAACGCGAAGAATTGGCTTAGTAACACTACGTGCCATCATCCATATAAATAGCAGGCCAACGATTGCGGCTAA  >  NC_002947/2194436‑2194554                                                                                                                                                                     CCTCCGACTCGCCTATGAGAAACAAGATGAGTTGGGCGAGTTGGAGGGTCAGATTGCCGTCGCCACTAGCGATGTCTCTCAGCATATATGCAACGCGAAGAATTGGCTTAGTAACACTACGTGCCATCATCCATATAAATAGCAGGCC                 >  4:162859/1‑148  CTCCGACTCGCCTATGAGAAACAAGATGAGTTGGGCGAGTTGGAGGGTCAGATTGCCGTCGCCACTAGCGATGTCTCTCAGCATATATGCAACGCGAAGAATTGGCTTAGTAACACTACGTGCCATCATCCATATAAATAGCA                     >  5:250530/1‑143  CTCCGACTCGCCTATGAGAAACAAGATGAGTTGGGCGAGTTGGAGGGTCAGATTGCCGTCGCCACTAGCGATGTCTCTCAGCATATATGCAACGCGAAGAATTGGCTTAGTAACACTACGTGCCATCATCCATATAAATAGCA                     <  6:250530/143‑1   TCCGACTCGCCTATGAGAAACAAGATGAGTTGGGCGAGTTGGAGGGTCAGATTGCCGTCGCCACTAGCGATGTCTCTCAGCATATATGCAACGCGAAGAATTGGCTTAGTAACACTACGTGCCATCATCCATATAAATAGCAGGCCAAC              >  5:320868/1‑149                TGAGAAACAAGATGAGTTGGGCGAGTTGGAGGGTCAGATTGCCGTCGCCACTAGCGATGTCTCTCAGCATATATGCAACGCGAAGAATTGGCTTAGTAACACTACGTGCCATCATCCATATAAATAGCAGGCCAACGATTGCGGCTAA  <  6:320868/148‑1                                                                                                                                                                     CCTCCGACTCGCCTATGAGAAACAAGATGAGTTGGGCGAGTTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/2194438‑2194395 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggAGGGTCAGATTGCCGTCGCCACTAGCGATGTCTCTCAGCATATATGCAACGCGAAGAATTGGCTTAGTAACACTACGTGCCATCATCCATATAAATAGCAGGCCAACGATTGCGGCTAA  >  NC_002947/2194436‑2194554

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.