New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2194395 =	49 (0.860)	5 (0.090)	5/256	NT	9.0%	coding (1270/2151 nt)	PP_1940	methyl‑accepting chemotaxis transducer
	?	NC_002947	2194436 =	53 (0.950)					coding (1229/2151 nt)	PP_1940	methyl‑accepting chemotaxis transducer

AGCAATCGCTGCCGACTCGTCCGCCGTAGCTCGGGCAGCCTGGACTGAGCGTTTTACCTCGGCGATAGTAGGCTGTAGTTTATCAAGGAGGGAGTTGAACCATGCCACCAACTCGCCCAACTCATCTTGTTTCTCATAGGCGAGTCGGAGGGTCAGATTGCCGTCGCCACTAGCGATGTCTCTCAGCATATATGCAACGCGAAGAATTGGCTTAGTAACACTACGTGCCATCATCCATATAAATAGCAGGCCAACGATTGCGGCTAACAATCCCAATCCAAGCTCTACAAGA  >  NC_002947/2194288‑2194579                                                                                                                                                     |                                                                                                                                                gttggcctgctatttatatggatgatggcacgtagtgttactaagccaattcttcgcgttgcatatatgctgagagacatcgctagtggcgacggcaatctgaccctCCAACTCGCCCAACTCATCTTGTTTCTCATAGGCGAGTCGGa                                                                                                                                                 >  5:320868‑M1/108‑149 (MQ=255) aGCAATCGCTGCCGACTCGTCCGCCGTAGCTCGGGCAGCCTGGACTGAGCGTTTTACCTCGGCGATAGTAGGCTGTAGTTTATCAAGGAGGGAGTTGAACCATGCCACCAACTCGCCCAACTCATCTTGTTTCTCATAGGCGAGTCGGa                                                                                                                                                 <  5:235561/149‑1 (MQ=255)  gCAATCGCTGCCGACTCGTCCGCCGTAGCTCGGGCAGCCTGGACTGAGCGTTTTACCTCGGCGATAGTAGGCTGTAGTTTATCAAGGAGGGAGTTGAACCATGCCACCAACTCGCCCAACTCATCTTGTTTCTCATAGGCGAGTCGGAg                                                                                                                                                >  1:69913/1‑149 (MQ=255)    ggcctgctatttatatggatgatggcacgtagtgttactaagccaattcttcgcgttgcatatatgctgagagacatcgctagtggcgacggcaatctgaccctCCAACTCGCCCAACTCATCTTGTTTCTCATAGGCGAGTCGGAgg                                                                                                                                               >  4:162859‑M1/105‑148 (MQ=255)     aTCGCTGCCGACTCGTCCGCCGTAGCTCGGGCAGCCTGGACTGAGCGTTTTACCTCGGCGATAGTAGGCTGTAGTTTATCAAGGAGGGAGTTGAACCATGCCACCAACTCGCCCAACTCATCTTGTTTCTCATAGGCGAGTCGGAGGGt                                                                                                                                             >  2:314067/1‑149 (MQ=255)        tgctatttatatggatgatggcacgtagtgttactaagccaattcttcgcgttgcatatatgctgagagacatcgctagtggcgacggcaatctgaccctCCAACTCGCCCAACTCATCTTGTTTCTCATAGGCGAGTCGGAg                                                                                                                                                >  5:250530‑M1/101‑143 (MQ=255)        tgctatttatatggatgatggcacgtagtgttactaagccaattcttcgcgttgcatatatgctgagagacatcgctagtggcgacggcaatctgaccctCCAACTCGCCCAACTCATCTTGTTTCTCATAGGCGAGTCGGAg                                                                                                                                                <  6:250530‑M1/43‑1 (MQ=255)         cTGCCGACTCGTCCGCCGTAGCTCGGGCAGCCTGGACTGAGCGTTTTACCTCGGCGATAGTAGGCTGTAGTTTATCAAGGAGGGAGTTGAACCATGCCACCAACTCGCCCAACTCATCTTGTTTCTCATAGGCGAGTCGGAGGGt                                                                                                                                             >  8:238373/1‑145 (MQ=255)         cTGCCGACTCGTCCGCCGTAGCTCGGGCAGCCTGGACTGAGCGTTTTACCTCGGCGATAGTAGGCTGTAGTTTATCAAGGAGGGAGTTGAACCATGCCACCAACTCGCCCAACTCATCTTGTTTCTCATAGGCGAGTCGGAGGGTCAGa                                                                                                                                         <  2:269208/149‑1 (MQ=255)             cGACTCGTCCGCCGTAGCTCGGGCAGCCTGGACTGAGCGTTTTACCTCGGCGATAGTAGGCTGTAGTTTATCAAGGAGGGAGTTGAACCATGCCACCAACTCGCCCAACTCATCTTGTTTCTCATAGGCGAGTCGGAGGGTCAGAtt                                                                                                                                       >  1:63489/1‑147 (MQ=255)             cGACTCGTCCGCCGTAGCTCGGGCAGCCTGGACTGAGCGTTTTACCTCGGCGATAGTAGGCTGTAGTTTATCAAGGAGGGAGTTGAACCATGCCACCAACTCGCCCAACTCATCTTGTTTCTCATAGGCGAGTCGGAGGGTCAGAtt                                                                                                                                       <  2:63489/147‑1 (MQ=255)                 tCGTCCGCCGTAGCTCGGGCAGCCTGGACTGAGCGTTTTACCTCGGCGATAGTAGGCTGTAGTTTATCAAGGAGGGAGTTGAACCATGCCACCAACTCGCCCAACTCATCTTGTTTCTCATAGGCGAGTCGGAGGGTCAGATTGCCGTc                                                                                                                                 >  1:149424/1‑149 (MQ=255)                   gTCCGCCGTAGCTCGGGCAGCCTGGACTGAGCGTTTTACCTCGGCGATAGTAGGCTGTAGTTTATCAAGGAGGGAGTTGAACCATGCCACCAACTCGCCCAACTCATCTTGTTTCTCATAGGCGAGTCGGAGGGTCAGATTGCCGTCGc                                                                                                                               <  2:69913/149‑1 (MQ=255)                    tCCGCCGTAGCTAGGGCAGCCTGGACTGAGCGTTTTACCTCGGCGATAGTAGGCTGTAGTTTATCAAGGAGGGAGTTGAACCATGCCACCAACTCGCCCAACTCATCTTGTTTCTCATAGGCGAGTCGGAGGGTCAGATTGCCGTCGc                                                                                                                               >  8:177392/1‑148 (MQ=255)                      cgccgTAGCTCGGGCAGCCTGGACTGAGCGTTTTACCTCGGCGATAGTAGGCTGTAGTTTATCAAGGAGGGAGTTGAACCATGCCACCAACTCGCCCAACTCATCTTGTTTCTCATAGGCGAGTCGGAGGGTCAGATTGCCGTCGCCAc                                                                                                                            >  2:242998/1‑149 (MQ=255)                        ccgTAGCTCGGGCAGCCTGGACTGAGCGTTTTACCTCGGCGATAGTAGGCTGTAGTTTATCAAGGAGGGAGTTGAACCATGCCACCAACTCGCCCAACTCATCTTGTTTCTCATAGGCGAGTCGGAGGGTCAGATTGCCGTCGCCACTa                                                                                                                          <  2:191194/149‑1 (MQ=255)                        ccgTAGCTCGGGCAGCCTGGACTGAGCGTTTTACCTCGGCGATAGTAGGCTGTAGTTTATCAAGGAGGGAGTTGAACCATGCCACCAACTCGCCCAACTCATCTTGTTTCTCATAGGCGAGTCGGAGGGTCAGATTGCCGTCGCCACTa                                                                                                                          <  6:102572/149‑1 (MQ=255)                         cgTAGCTCGGGCAGCCTGGACTGAGCGTTTTACCTCGGCGATAGTAGGCTGTAGTTTATCAAGGAGGGAGTTGAACCATGCCACCAACTCGCCCAACTCATCTTGTTTCTCATAGGCGAGTCGGAgg                                                                                                                                               >  8:217693/1‑127 (MQ=255)                         cgTAGCTCGGGCAGCCTGGACTGAGCGTTTTACCTCGGCGATAGTAGGCTGTAGTTTATCAAGGAGGGAGTTGAACCATGCCACCAACTCGCCCAACTCATCTTGTTTCTCATAGGCGAGTCGGAgg                                                                                                                                               <  7:217693/127‑1 (MQ=255)                             gCTCGGGCAGCCTGGACTGAGCGTTTTACCTCGGCGATAGTAGGCTGTAGTTTATCAAGGAGGGAGTTGAACGATGCCACCAACTCGCCCAACTCATCTTGTTTCTCATAGGCGAGTCGGAGGGTCAGATTGCCGTCGCCACTAGCGAt                                                                                                                     <  7:177392/149‑1 (MQ=255)                                       ccTGGACTGAGCGTTTTACATCGGCGATACTAGGCTGTAGTTTATCAAGGAGGGAGTTGAACCATGCCACCAACTCGCCCAACTCATATTTTTTATCATAGGCGAGTCGGAGGGTCAGATTGCCGTCGCCACAAGCGATGTCTCTCAg                                                                                                            >  5:123654/1‑148 (MQ=255)                                           gACTGAGCGTTTTACCTCGGCGATAGTAGGCTGTAGTTTATCAAGGAGGGAGTTGAACCATGCCACCAACTCGCCCAACTCATCTTGTTTCTCATAGGCGAGTCGGAGGGTCAGATTGCCGTCGCCACTAGCGATGTCTCTCAGCatat                                                                                                       <  2:149424/149‑1 (MQ=255)                                           gACTGAGCGTTTTACCTCGGCGATAGTAGGCTGTAGTTTATCAAGGAGGGAGTTGAACCATGCCACCAACTCGCCCAACTCATCTTGTTTCTCATAGGCGAGTCGGAGGGTCAGATTGCCGTCGCCACTAGCGATGTCTCTCAGCatat                                                                                                       <  7:238373/149‑1 (MQ=255)                                             cTGAGCGTTTTACCTCGGCGATAGTAGGCTGTAGTTTATCAAGGAGGGAGTTGAACCATGCCACCAACTCGCCCAACTCATCTTGTTTCTCATAGGCGAGTCGGAGGGTCAGATTGCCGTCGCCACTAGCGATGTCTCTCAGCatatat                                                                                                     <  1:242998/149‑1 (MQ=255)                                              tGAGCGTTTTACCTCGGCGATAGTAGGCTGTAGTTTATCAAGGAGGGAGTTGAACCATGCCACCAACTCGCCCAACTCATCTTGTTTCTCATAGGCGAGTCGGAGGGTCAGATTGCCGTCGCCACTAGCGATGTCTCTCAGCatatat                                                                                                     >  3:257440/1‑148 (MQ=255)                                                 gCGGTTTACCTCGGCGATAGTAGGCTGTAGTTTATCAAGGAGGGAGTTGAACCATGCCACCAACTCGCCCAACTCATCTTGTTTCTCATAGGCGAGTCGGAGGGTCAGATTGCCGTCGCCACTAGCGATGTCTCTCAGCATATATGCaa                                                                                                 <  7:151807/149‑1 (MQ=255)                                                        aCCTCGGCGATAGTAGGCTGTAGTTTATCAAGGAGGGAGTTGAACCATGCCACCAACTCGCCCAACTCATCTTGTTTCTCATAGGCGAGTCGGAGGGTCAGATTGCCGTCGCCACTAGCGATGTCTCTCAGCATATATGCAAcgcg                                                                                             >  3:209478/1‑146 (MQ=255)                                                         ccTCGGCGATAGTAGGCTGTAGTTTATCAAGGAGGGAGTTGAACCATGCCACCAACTCGCCCAACTCATCTTGTTTCTCATAGGCGAGTCGGAGGGTCAGATTGCCGTCGCCACTAGCGATGTCTCTCAGCatatat                                                                                                     >  2:150084/1‑137 (MQ=255)                                                         ccTCGGCGATAGTAGGCTGTAGTTTATCAAGGAGGGAGTTGAACCATGCCACCAACTCGCCCAACTCATCTTGTTTCTCATAGGCGAGTCGGAGGGTCAGATTGCCGTCGCCACTAGCGATGTCTCTCAGCatatat                                                                                                     <  1:150084/137‑1 (MQ=255)                                                                gATAGTAGGCTGTAGTTTATCAAGGAGGGAGTTGAACCATGCCACCAACTCGCCCAACTAATCTTGTTTCTCATAGGCGAGTCGGAGGGTCAGATTGCCGTCGCCACTAGCGATGTCTCTCAGCATATATGCAACGCGAAGAATTGGCt                                                                                  >  3:69964/1‑149 (MQ=255)                                                                 aTAGTAGGCTGTAGTTTATCAAGGAGGGAGTTGAACCATGCCACCAACTCGCCCAACTCATCTTGTTTCTCATAGGCGAGTCGGAGGGTCAGATTGCCGTCGCCACTAGCGATGTCTCTCAGCATATATGCAACGCga                                                                                            >  6:117906/1‑138 (MQ=255)                                                                 aTAGTAGGCTGTAGTTTATCAAGGAGGGAGTTGAACCATGCCACCAACTCGCCCAACTCATCTTGTTTCTCATAGGCGAGTCGGAGGGTCAGATTGCCGTCGCCACTAGCGATGTCTCTCAGCATATATGCAACGCga                                                                                            <  5:117906/138‑1 (MQ=255)                                                                        gCTGTAGTTTATCAAGGAGGGAGTTGAACCATGCCACCAACTCGCCCAACTCATCTTGTTTCTAATAGGCGAGTCGGAGGGTCAGATTGCCGTCGCCACTAGCGATGTCTCTCAGCATATATGCAACGCGAAGAATTGGCTTAGTAac                                                                           >  4:302135/1‑148 (MQ=255)                                                                         cTGTAGTTTATCAAGGAGGGAGTTGAACCATGCCACCAACTCGCCCAACTCATCTTGTTTCTCATAGGCGAGTCGGAGGGTCAGATTGCCGTCGCCACTAGCGATGTCTCTCAGCATATATGCAACGCGAAGAATTGGCTTAGTAacac                                                                         >  7:173448/1‑149 (MQ=255)                                                                          tGTAGTTTATCAAGGAGGGAGTTGAACCATGCCACCAACTCGCCCAACTCATCTTGTTTCTCATAGGCGAGTCGGAGGGTCAGATTGCCGTCGCCACTAGCGATGTCTCTCAGCATATATTCAACGCGAAGAATTCGCTAAGTAacac                                                                         >  8:324302/1‑148 (MQ=255)                                                                           gTAGTTTATCAAGGAGGGAGTTGAACCATGCCACCAACTCGCCCAACTCATCTTGTTTATCATAGGCGAGTAGGAGGGTCAGATTGCCGTCGCCACTAGCGATGTCTCTCAGCATATATGCAACGCGAAGAATTGGCTTAGTAACACTa                                                                       >  1:57697/1‑149 (MQ=255)                                                                                    cAAGGAGGGAGTTGAACCATGCCACCAACTCGCCCAACTCATCTTGTTTCTCATAGGCGAGTCGGAGGGTCAGATTGCCGTCGCCACTAGCGATGTCTCTCAGCATATATGCAACGCGAAGAATTGGCTTAGTAAAACTACGTGCcat                                                               >  8:88083/1‑148 (MQ=255)                                                                                        gagggagTTGAACCATGCCACCAACTCGCCCAACTCATCTTGTTTCTCATAGGCGAGTCGGAGGGTCAGATTGCCGTCGCCACTAGCGATGTCTCTCAGCATATATGCAACGCGAAGAATTGGCTTAGTAACACTACGTGCCATCATcc                                                          <  4:97382/149‑1 (MQ=255)                                                                                             agTTGAACCATGCCACCAACTCGCCCAACTCATCTTGTTTCTCATAGGCGAGTCGGAGGGTCAGATTGCCGTCGCCACTAGCGATGTCTCTCAGCATATATGCAACGCGAAGAATTGGCTTAGTAACACTACGTGCCATCATCCAtata                                                     <  2:351790/149‑1 (MQ=255)                                                                                                  aaCCATGCCACCAACTCGCCCAACTCATCTTGTTTCTCATAGGCGAGTCGGAGGGTCAGATTGCCGTCGCCACTAGCGATGTCTCTCAGCATATATGCAACGCGAAGAATTGGCTTAGTAACACTACGTGCCATCATCCATATaaa                                                   >  8:77057/1‑146 (MQ=255)                                                                                                    ccATGCCACCAACTCGCCCAACTCATCTTGTTTCTCATAGGCGAGTCGGAGGGTCAGATTGCCGTCGCCACTAGCGATGTCTCTCAGCATATATGCAACGCGAAGAATTGGCTTAGTAACACTACGTGCCATCATCCATATAAATAGCa                                              <  4:209478/149‑1 (MQ=255)                                                                                                    ccATGCCACCAACTCGCCCAACTCATCTTGTTTCTAATAGGCGAGTCGGAGGGTCAGATTGCCGTCGCCACTAGCGATGTCTCTCAGCATATATGCAACGCGAAGAATTGGCTTAGTAACACTACGTGCCATCATCCATATAAATAGCa                                              <  3:302135/149‑1 (MQ=255)                                                                                                     cATGCCACCAACTCGCCCAACTCATCTTGTTTCTCATAGGCGAGTCGGAGGGTCAGATTGCCGTAGCCACTAGCGATGTCTCTCAGCATATATGCAACGCGAAGAATTGGCTTAGTAACACTACGTGCCATCATCCATATAAATAGCAg                                             >  2:216802/1‑149 (MQ=255)                                                                                                         cctccgactcgcctatgagaaacaagatgagttgggcgagttggAGGGTCAGATTGCCGTCGCCACTAGCGATGTCTCTCAGCATATATGCAACGCGAAGAATTGGCTTAGTAACACTACGTGCCATCATCCATATAAATAGCAGGcc                                          >  4:162859‑M2/45‑148 (MQ=255)                                                                                                          ctccgactcgcctatgagaaacaagatgagttgggcgagttggAGGGTCAGATTGCCGTCGCCACTAGCGATGTCTCTCAGCATATATGCAACGCGAAGAATTGGCTTAGTAACACTACGTGCCATCATCCATATAAATAGCa                                              >  5:250530‑M2/44‑143 (MQ=255)                                                                                                          ctccgactcgcctatgagaaacaagatgagttgggcgagttggAGGGTCAGATTGCCGTCGCCACTAGCGATGTCTCTCAGCATATATGCAACGCGAAGAATTGGCTTAGTAACACTACGTGCCATCATCCATATAAATAGCa                                              <  6:250530‑M2/100‑1 (MQ=255)                                                                                                           tccgactcgcctatgagaaacaagatgagttgggcgagttggAGGGTCAGATTGCCGTCGCCACTAGCGATGTCTCTCAGCATATATGCAACGCGAAGAATTGGCTTAGTAACACTACGTGCCATCATCCATATAAATAGCAGGCCAAc                                       >  5:320868‑M2/43‑149 (MQ=255)                                                                                                               aCTCGCCCAACTCATCTTGTTTCTCATAGGCGAGTCGGAGGGTCAGATTGCCGTCGCCACTAGCGATGTCTCTCAGCATATATGCAACGCGAAGAATTGGCTTAGTAACACTACGTGCCATCATCCATATAAATAGCAGGCCAACGAtt                                   <  1:314067/149‑1 (MQ=255)                                                                                                                   gCCCAACTCATCTTGTTTCTCATAGGCGAGTCGGAGGGTCAGATTGCCGTCGCCACTAGCGATGTCTCTCAGCATATATGCAACGCGAAGAATTGGCTTAGTAACACTACGTGCCATCATCCATATAAATAGCAGGCCaa                                        >  6:147663/1‑140 (MQ=255)                                                                                                                   gCCCAACTCATCTTGTTTCTCATAGGCGAGTCGGAGGGTCAGATTGCCGTCGCCACTAGCGATGTCTCTCAGCATATATGCAACGCGAAGAATTGGCTTAGTAACACTACGTGCCATCATCCATATAAATAGCAGGCCaa                                        <  5:147663/140‑1 (MQ=255)                                                                                                                   gCCCAACTCATCTTGTTTCTCATAGGCGAGTCGGAGGGTCAGATTGCCGTCGCCACTAGCGATGTCTCTCAGCATATATGCAACGCGAAGAATTGGCTTAGTAACACTACGTGCCATCATCCATATAAATAGCAGGCCAACGATTGCgg                               >  3:130654/1‑149 (MQ=255)                                                                                                                    cccAACTCATCTTGTTTCTCATAGGCTAGTCGGAGGGTCAGATTGCCGTCGCCACTAGCGATGTCTCTCAGCATATATGCAACGCGAAGAATTGGCTTAGTAACACTACGTGCCATCATCCATATAAATAGCAGGCCAACGATTGCGGc                              <  7:324302/149‑1 (MQ=255)                                                                                                                     ccAACTCATCTTGTTTCTCATAGGCGAGTCGGAGGGTCAGATTGCCGTCGCCACTAGCGATGTCTCTCAGCATATATGCAACGCGAAGAATTGGCTTAGTAACACTACGTGCCATCATCCATATAAATAGCAGGCCAACGATTGCGGc                              >  2:56082/1‑148 (MQ=255)                                                                                                                       aaCTCATCTTGTTTCTCATAGGCGAGTCGGAGGGTCAGATTGCCGTCGCCACTAGCGATGTCTCTCAGCATATATGCAACGCGAAGAATTGGCTTAGTAACACTACGTGCCATCATCCATATAAATAGCAGGCCAACGATTGCGGCTaa                           <  7:88083/149‑1 (MQ=255)                                                                                                                        tgagaaacaagatgagttgggcgagttggAGGGTCAGATTGCCGTCGCCACTAGCGATGTCTCTCAGCATATATGCAACGCGAAGAATTGGCTTAGTAACACTACGTGCCATCATCCATATAAATAGCAGGCCAACGATTGCGGCTaa                           <  6:320868‑M2/119‑1 (MQ=255)                                                                                                                         cTCATCTTGTTTCTCATAGGCGAGACCGAGGGTCAGATTGCCGTCGCCACTAGCGAAGTCTCACAGCATATATGCAACGAGAAGAATTGGCTTAg                                                                               >  6:186771/1‑95 (MQ=255)                                                                                                                            aTCTTGTTTCTCATAGGCGAGTCGGAGGGTCAGATTGCCGTCGCCACTAGCGATGTCTCTCAGCATATATGCAACGCGAAGAATTGGCTTAGTAACACTACGTGCCATCATCCATATAAATAGCAGGCCAACGATTGCGGCTAAcaatc                      >  5:199512/1‑149 (MQ=255)                                                                                                                            aTCTTGTTTCTCATAGGCGAGTCGGAGGGTCAGATTGCCGTCGCCACTAGCGATGTCTCTCAGCATATATGCAACGCGAAGAATTGGCTTAGTAACACTACGTGCCATCATCCATATAAATAGCAGGCCAACGATTGCGGCTAAcaatc                      >  5:53260/1‑149 (MQ=255)                                                                                                                              cTTGTTTCTCATAGGCGAGTCGGAGGGTCAGATTGCCGTCGCCACTAGCGATGTCTCTCAGCATATATGCAACGCGAAGAATTGGCTTAGTAACACTACGTGCCATCATCCATATAAATAGCAGGCCAACGATTGCGGCTAAcaatcc                     <  6:123654/148‑1 (MQ=255)                                                                                                                              cTTGTTTCTCATAGGCGAGTCGGAGGGTCAGATTGCCGTCGCCACTAGCGATGTCTCTCAGCATATATGCAACGCGAAGAATTGGCTTAGTAACACTACGTGCCATCATCCATATAAATAGCAGGCCAACGATTGCGGCTAAcaatcc                     >  5:54195/1‑148 (MQ=255)                                                                                                                                tGTTTCTCATAGGCGAGTCGGAGGGTCAGATTGCCGTCGCCACTAGCGATGTCTCTCAGCATATATGCAACGCGAAGAATTGGCTTAGTAACACTACGTGCCATCATCCATATAAATAGCAGGCCAACGATTGCGGCTAAcaatcccaa                  >  5:163627/1‑149 (MQ=255)                                                                                                                                  tttCTCATAGGCGAGTCGGAGGGTCAGATTGCCGTCGCCACTAGCGATGTCTCTCAGCATATATGCAACGCGAAGAATTGGCTTAGTAACACTACGTGCCATCATCCATATAAATAGCAGGCCAACGATTGCGGCTAAcaatcccaatc                >  5:40257/1‑149 (MQ=255)                                                                                                                                        aTAGGCGAGTCGGAGGGTCAGATTGCCGTCGCCACTAGCGATGTCTCTCAGCATATATGCAACGCGAAGAATTGGCTTAGTAACACTACGTGCCATCATCCATATAAATAGCAGGCCAACGATTGCGGCTAACAATCCCAATCCaa             <  8:173448/146‑1 (MQ=255)                                                                                                                                         tAGGCGAGTCGGAGGGTCAGATTGCCGTCGCCACTAGCGATGTCTCTCAGCATATATGCAACGCGAAGAATTGGCTTAGTAACACTACGTGCCATCATCCATATAAATAGCAGGCCAACGATTGCGGCTAAcaatcccaat                 <  4:174232/141‑1 (MQ=255)                                                                                                                                         tAGGCGAGTCGGAGGGTCAGATTGCCGTCGCCACTAGCGATGTCTCTCAGCATATATGCAACGCGAAGAATTGGCTTAGTAACACTACGTGCCATCATCCATATAAATAGCAGGCCAACGATTGCGGCTAAcaatcccaat                 >  3:174232/1‑141 (MQ=255)                                                                                                                                         tAGGCGAGTCGGAGGGTCAGATTGCCGTCGCCACTAGCGATGTCTCTAAGCATATATGCAACGCGAAGAATTGGCTTAGTAACACTACGTGCCATCATCCATATAAATAGCAGGCCAACGATTGCGGCTAACAATCCCAATCCAAGctc         >  8:246829/1‑149 (MQ=255)                                                                                                                                            gCGAGTCGGAGGGTCAGATTGCCGTCGCCACTAGCGATGTCTCTCAGCATATATGCAACGCGAAGAATTGGCTTAGTAACACTACGTGCCATCATCCATATAAATAGCAGGCCAACGATTGCGGCTAACAATCCCAATCCAAGCTCTa       >  4:341209/1‑148 (MQ=255)                                                                                                                                            gCGAGTCGGAGGGTCAGATTGCCGTCGCCACTAGCGATGTCTCTCAGCATATATGCAACGCGAAGAATTGGCTTAGTAACACTACGTGCCATCATCCATATAAATAGCAGGCCAACGATTGCGGCTAACAATCCCAATCCAAGCTCTAc      <  6:54195/149‑1 (MQ=255)                                                                                                                                                gTCGGAGGGTCAGATTGCCGTCGCCACTAGCGATGTCTCTCAGCATATATGCAACGCGAAGAATTGGCTTAGTAACACTACGTGCCATCATCCATATAAATAGCAGGCCAACGATTGCGGCTAACAATCCCAATCCAAGCTCTACAaga  <  7:77057/149‑1 (MQ=255)                                                                                                                                                gTCGGAGGGTCAGATTGCCGTCGCCACTAGCGATGTCTCTCAGCATATATGCAACGCGAAGAATTGGCTTAGTAACACTACGTGCCATCATCCATATAAATAGCAGGCCAACGATTGCGGCTAACAATCCCAATCCAAGCTCTACAaga  <  1:216802/149‑1 (MQ=255)                                                                                                                                                     |                                                                                                                                                AGCAATCGCTGCCGACTCGTCCGCCGTAGCTCGGGCAGCCTGGACTGAGCGTTTTACCTCGGCGATAGTAGGCTGTAGTTTATCAAGGAGGGAGTTGAACCATGCCACCAACTCGCCCAACTCATCTTGTTTCTCATAGGCGAGTCGGAGGGTCAGATTGCCGTCGCCACTAGCGATGTCTCTCAGCATATATGCAACGCGAAGAATTGGCTTAGTAACACTACGTGCCATCATCCATATAAATAGCAGGCCAACGATTGCGGCTAACAATCCCAATCCAAGCTCTACAAGA  >  NC_002947/2194288‑2194579

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.