| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2211507 = | 45 (0.790) | 4 (0.070) | 4/250 | NT | 8.7% | coding (898/1167 nt) | PP_1954 | hypothetical protein |
| ? | NC_002947 | 2211544 = | 41 (0.750) | coding (935/1167 nt) | PP_1954 | hypothetical protein | |||||
CCAGAAAAGAGTGGAACCAGCACCAAAGTTGCCAAATGTGCCAGGTGAAGTGAGCGTGCCGAACTGCGACACGGTGAGGCCGTCCCCACCAAGCGCAAAGCCGAG‑CCCCATGTTGCCTGCTGGCAGATCCCAATGGCGGGCATCAGCTAGCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2211659‑2211507‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agcagGCAACATGGGGCTCGGCTTTGCGCTTGGTGGGGACGGCCTCACCGTGTCGCAGTTCGGCACGCTCACTTCACCTGGCACATTTGGCAACTTTGGTGCTGGTTCCACTCTTTTCTGGGTCGACCCTGAGTCGCAAATTACTTTTGT > NC_002947/2211544‑2211688 CCAGAAAAGAGTGGAACCAGCACCAAAGTTGCCAAATGTGCCAGGTGAAGTGAGCGTGCCGAACTGCGACACGGTGAGGCCGTCCCCACCAAGCGCAAAGCCGAG‑CCCCATGTTGCCTGCTGGCAGATCCCAATGGCGGGCATCAGCTA < 8:318395/149‑1 AGAAAAGAGTGGAACCAGCACCAAACTTGCCAAATGTGCCAGGTGAAGTGAGCTTGCCGAACTGCGACACGGTGAGGCCGTCCCCACCAAGCGCAAAGCCGAG‑CCCCATGTTGCCTGCTGGCAGATCCCAATGGCGGGCATCAGCTAG > 1:171522/1‑148 AAAGAGTGGAACCAGCACCAAAGTTGCCAAATGTGCCAGGTGAAGTGAGCGTGCCGAACTGCGACACGGTGAGGCCGTCCCCACCAAGCGCAAAGCCGAGCCCCCATGTTGCCTGCTGGCAGATCCCAATGGCGGGCATCAGCTAGCAG > 2:33351/1‑149 AAGTGAGCGTGCCGAACTGCGACACGGTGAGGCCGTCCCCACCAAGCGCAAAGCCGAG‑CCCCATGTTGCCTGCTGGCAGATCCCAATGGCGGGCATCAGCTAG > 3:39124/1‑103 AAGTGAGCGTGCCGAACTGCGACACGGTGAGGCCGTCCCCACCAAGCGCAAAGCCGAG‑CCCCATGTTGCCTGCTGGCAGATCCCAATGGCGGGCATCAGCTAG < 4:39124/103‑1 CATGTTGCCTGCTGGCAGATCCCAATGGCGGGCATCAGCTAGCAGGCAACATGGGGCTCGGCTTTGCGCTTGGTGGGGACGGCCTCACCGTGTCGCAGTTCGGCACGCTCACTTCACCTGGCACATTTGGCAACTTTGGTGCTGGTTC > 4:136639/1‑148 TGCCTGCTGGCAGATCCCAATGGCGGGCATCAGCTAGCAGGCAACATGGGGCTCGGCTTTGCGCTTGGTGGGGACGGCCTCACCGTGTCGCAGTTCGGCACGCTCACTTC > 7:235061/1‑110 TGCCTGCTGGCAGATCCCAATGGCGGGCATCAGCTAGCAGGCAACATGGGGCTCGGCTTTGCGCTTGGTGGGGACGGCCTCACCGTGTCGCAGTTCGGCACGCTCACTTC < 8:235061/110‑1 GGCATCAGCTAGCAGGCAACATGGGGCTCGGCTTTGCGCTTGGTGGGGACGGCCTCACCGTGTCGCAGTTCGGCACGCTCACTTCACCTGGCACATTTGGCAACTTTGGTGCTGGTTCCACTCTTTTCTGGGTCGACCCTGAGTCGCAA < 3:136639/149‑1 GCAGGCAACATGGGGCTCGGCTTTGCGCTTGGTGGGGACGGCCTCACCGTGTCGCAGTTCGGCACGCTCACTTCACCTGGCACATTTGGCAACTTTGGTGCTGGTTCCACTCTTTTCTGGGTCGACCCTGAGTCGCAAATTACTTTTGT < 2:260798/149‑1 GCAGGCAACATGGGGCTCGGCTTTGCGCTTGGTGGGGACGGCCTCACCGTGTCGCAGTTCGGCACGCTCACTTCACCTGGCACATTTGGCAACTTTGGTGCTGGTTCCACTCTTTTCTGGGTCGACCCTGAGTCGCAAATTACTTTTGT < 3:160997/149‑1 CCAGAAAAGAGTGGAACCAGCACCAAAGTTGCCAAATGTGCCAGGTGAAGTGAGCGTGCCGAACTGCGACACGGTGAGGCCGTCCCCACCAAGCGCAAAGCCGAG‑CCCCATGTTGCCTGCTGGCAGATCCCAATGGCGGGCATCAGCTAGCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2211659‑2211507‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agcagGCAACATGGGGCTCGGCTTTGCGCTTGGTGGGGACGGCCTCACCGTGTCGCAGTTCGGCACGCTCACTTCACCTGGCACATTTGGCAACTTTGGTGCTGGTTCCACTCTTTTCTGGGTCGACCCTGAGTCGCAAATTACTTTTGT > NC_002947/2211544‑2211688 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |