New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 2295773 | 102 (1.800) | 8 (0.150) | 5/250 | NT | 7.3% | intergenic (+19/+114) | PP_5496/PP_2023 | hypothetical protein/glutathione S‑transferase family protein |
? | NC_002947 | = 2295860 | 104 (1.910) | intergenic (+106/+27) | PP_5496/PP_2023 | hypothetical protein/glutathione S‑transferase family protein |
CGCATCGGTCGTACTGCCAGCGCATGCCCATGCCGACAGCAGCAAGGCTTCTGCCACCCACAGCTACACCGAGCAGTACCTGCGCCAGAGCGCCAATTTCCATGCGGCCCTGAGTGGCAAGCACCACCACTGATCTGGCTTGTGTGAGGTCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2295622‑2295773 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggtccGTGTGGGAGCGGGCATGCCCGCGAAGCGGGCACCGCGGTGGATGGCACCGGCTCTGCCGGTGTTCGCGGGCATGCCCGCTCCCACAAGGACCTCACACAAGCCAGATCAGTGGTGGTGCTTGCCACTCAGGGCCGCATGGAAATTG < NC_002947/2295860‑2295715 CGCATCGGTCGTACTGCCAGCGCATGTCCATGCCGACAGCAGCAAGGCTTCTGCCACCCACAGCTACACCGAGCAGTACCTGCGCCAGAGCGCCAATTTCCATGCGGCCCTGAGTGGCAAGCACCACCACTGATCTGGCTTGTGTGAGG < 8:99537/149‑1 CGCATCGGTCGTACTGCCAGCGCATGCCCATGCCGACAGCAGCAAGGCTTCTGCCACCCACAGCTACACCGAGCAGTACCTGCGCCAGAGCGCCAATTTCCATGCGGCCCTGAGTGGCAAGCACCACCACTGATCTGGCTTGTGTGAGG > 8:329613/1‑149 CGCATCGGTCGTACTGCCAGCGCATGCCCATGCCGACAGCAGCAAGGCTTCTGCCACCCACAGCTACACCGAGCAGTACCTGCGCCAGAGCGCCAATTTCCATGCGGCCCTGAGTGGCAAGCACCACCACTGATCTGGCTTGTGTGAG < 2:247441/148‑1 CGCATCGGTCGTACTGCCAGCGCATGCCCATGCCGACAGCAGCAAGGCTTCTGCCACCCACAGCTACACCGAGCAGTACCTGCGCCAGAGCGCCAATTTCCATGCGGCCCTGAGTGGCAAGCACCACCACTGATCTGGCTTGTGTGAG < 3:335348/148‑1 GCCCATGCCGACAGCAGCAAGGCTTCTGCCACCCACAGCTACACCGAGCAGTACCTGCGCCAGAGCGCCAATTTCCATGCGGCCCTGAGTGGCAAGCACCACCACTGATCTGGCTTGTGTGAGGTCCGTGTGGGAGCGGGCATGCCCGC > 8:276729/1‑149 CAAGGCTTCTGCCACCCACAGCTACACCCAGCAGTACCTGCGCCAGACCGCCAATTTCCATGCGGCCCTGAGTGGCAAGCACCACCCCTGATCTGGCTTGTGTTAGGTCCTTGTGGGAGCGGGCATGCCCGCGAAGCGGGCACCGCGGT < 8:224559/149‑1 CCACAGCTACACCGAGCAGTACCTGCGCCAGAGCGCCAATTTCCATGCGGCCCTGAGTGGCAAGCACCACCACTGATCTGGCTTGTGTGAG < 3:310239/91‑1 GCAGTACCTGCGCCAGAGCGCCAATTTCCATGCGGCCCTGAGTGGCAAGCACCACCACTGATCTGGCTTGTGTGAGGTCCTTGTGGGAGCGGGCATGCCCGCGAAGCGGGCACCGCGGTGGATGGCACCGGCTCTGCCGGTGTTCGCGG < 4:88382/149‑1 CAGTACCTGCGCCAGAGCGCCAATTTCCATGCGGCCCTGAGTGGCAAGCACCACCACTGATCTGGCTTGTGTGAGGTCCGTGTGGGAGCGGGCATGCCCGCGAAGCGGGCACCGCGGTGGATGGCACCGGCTCTGCCGGTGTTCGCGGG < 7:276729/149‑1 cAGCCCCATTTACCATGCGGCCGTGAGGGGCAAGCACCACCACTGATCTGGCTTGTGTGAGGTCGGTGGGGGAGCGGGCTTCCCCGCTAAGCGGGCACCGCGGTGGATGGCACCGGCTCTGCCGGTGTTCGCGGGCATGCCCGCTCCCA < 4:193633/148‑1 GCCAATTTCCATGCGGCCCTGAGTGGCAAGCACCACCACTGATCTGGCTTGTGTGAGGTCCGTGTGGGAGCGGGCATGCCCGCGAAGCGGGCACCGCGGTGGATGGCACCGGCTCTGCCGGTGTTCGCGGGC > 3:348387/1‑132 TGGCAAGCACCACCACTGATCTGGCTTGTGTGAGGTCCGTGTGGGAGCGGGCATGCCCGCGAAGCGGGCACCGCGGTGGATGGCACCGGCTCGGCCGGTGTTCGCGGGGCTGCCCGCTCCCACAAGGCCCGCACCCAAGCCAGATCAGT > 1:279909/1‑149 TTGTGTGAGGTCCTTGTGGGAGCGGGCATGCCCGCGAAGCGGGCACCGCGGTGGATGGCACCGGCTCTGCCGGTGTTCGCGG > 7:45234/1‑82 cactttGGTCCGTTTGGCAGCGGGCATGCCCGCGAAGCGGGCACCGCGGTGGATGGCAACGGCTCTGCCGGTGTTCGCGGGCATGCCCGCTCCCACAAGGACCTCACACAAGCCAGATCAGTGGTGGTGCTTGCGACTCAGGGCCGCAT < 3:98246/143‑1 TCCGTGTGGGAGCGGGCATGCCCGCGAAGCGGGCACCGCGGTGGATGGCACCGGCTCTGCCGGTGTTCGCGGGCATGCCCGCTCCCACAAGGACCTCACACAAGCCAGATCAGTGGTGGTGCTTGCCACTCAGGGCCGCATGGAAATTG < 1:60434/149‑1 CGCATCGGTCGTACTGCCAGCGCATGCCCATGCCGACAGCAGCAAGGCTTCTGCCACCCACAGCTACACCGAGCAGTACCTGCGCCAGAGCGCCAATTTCCATGCGGCCCTGAGTGGCAAGCACCACCACTGATCTGGCTTGTGTGAGGTCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2295622‑2295773 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggtccGTGTGGGAGCGGGCATGCCCGCGAAGCGGGCACCGCGGTGGATGGCACCGGCTCTGCCGGTGTTCGCGGGCATGCCCGCTCCCACAAGGACCTCACACAAGCCAGATCAGTGGTGGTGCTTGCCACTCAGGGCCGCATGGAAATTG < NC_002947/2295860‑2295715 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |