New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 2747813	44 (0.780)	3 (0.060)	3/250	NT	6.6%	coding (693/741 nt)	PP_2403	chemotaxis protein CheY
	?	NC_002947	= 2747839	42 (0.770)					coding (667/741 nt)	PP_2403	chemotaxis protein CheY

TAGCGCTCGTAGGCCTGCAGGCCGAACGACAGACCATAAGCCAACACCAGGCCGGTGAAGAAGATCAGCGCCAGACGCGAGGCCAGGGTGCGCGGCCATTTCATGAGGGGGACTCGAGCAATTGCACCGGCAGCGAAAACACGTAGCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/2747665‑2747813 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agcccAGCTGCATCAAGACCGTGCGCAGCGAGGGCTACGTGTTTTCGCTGCCGGTGCAATTGCTCGAGTCCCCCTCATGAAATGGCCGCGCACCCTGGCCTCGCGTCTGGCGCTGATCTTCTTCACCGGCCTGGTGTTGGCTTATGGTCTG  <  NC_002947/2747839‑2747694                                                                                                                                                                                                                                                                                                         TAGCGCTCGTAGGCCTGCAGGCCGAACGACAGACCATAAGCCAACACCAGGCCGGTGAAGAAGATCAGCGCCAGACGCGAGGCCAGGGTGCGCGGCCATTTCATGAGGGGGACTCGAGCAATTGCACCGGCAGCGAAAACACGTAGCCC                                                                                                                                                    <  1:154130/149‑1                                   CATAAGCCAACACCAGGCCGGTGAAGAAGATCAGCGCCAGACGCGAGGCCAGGGTGCGCGGCCATTTCATGAGGGGGACTCGAGCAATTGCACCGGCAGCGAAAACACGTAGCCCAGCTGCATCAAGACCGTGCGCAGCGAGGGCTAC                                                                                                                   <  3:34320/148‑1                                   CATAAGCCAACACCAGGCCGGTGAAGAAGATCAGCGCCAGACGCGAGGCCAGGGTGCGCGGCCATTTCATGAGGGGGACTCGAGCAATTGCACCGGCAGCGAAAACACGTAGCCCAGCTGCATCAAGACCGTGCGCAGCGAGGGCTAC                                                                                                                   >  4:34320/1‑148                                    ATAAGCCAACACCAGGCCGGTGAAGAAGATCAGCGCCAGACGCGAGGCCAGGGTGCGCGGCCATTTCATGAGGGGGACTCGAGCAATTGCACCGGCAGCGAAAACACGTAGCCCAGCTGCATCAAGACCGTGCGCAGCGAGGGCTACGT                                                                                                                 <  3:76196/149‑1                                                                                                                                                   CCCAGCTGCATCAAGACCGTGCGCAGCGAGGGCTACGTGTTTTCGCTGCCGGTGCAATTGCTCGAGTCCCCCTCATGAAATGGCCGCGCACCCTGGCCTCGCGTCTGGCGCTGATCTTCTTCACCGGCCTGGTGTTGGCTTATGGTCTG  >  8:118603/1‑149                                                                                                                                                                                                                                                                                                         TAGCGCTCGTAGGCCTGCAGGCCGAACGACAGACCATAAGCCAACACCAGGCCGGTGAAGAAGATCAGCGCCAGACGCGAGGCCAGGGTGCGCGGCCATTTCATGAGGGGGACTCGAGCAATTGCACCGGCAGCGAAAACACGTAGCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/2747665‑2747813 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agcccAGCTGCATCAAGACCGTGCGCAGCGAGGGCTACGTGTTTTCGCTGCCGGTGCAATTGCTCGAGTCCCCCTCATGAAATGGCCGCGCACCCTGGCCTCGCGTCTGGCGCTGATCTTCTTCACCGGCCTGGTGTTGGCTTATGGTCTG  <  NC_002947/2747839‑2747694

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.