New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3078702	43 (0.760)	3 (0.060)	3/246	NT	7.5%	coding (564/1410 nt)	PP_2688	hypothetical protein
	?	NC_002947	= 3078728	33 (0.620)					coding (538/1410 nt)	PP_2688	hypothetical protein

CGCTGTTGAAACGGCCGGGCGTGAGCAGCACCGCGGTGGGGTTGTCCAGTGGGCTGGCGCTCTTGAGCGTGTCCAGCAGCAGGTTGGGGTAGTGATCGATGGGCGCGATGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3078590‑3078702 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gatgcgcCTGTTCCCCGAACTGTTTGCCGCCCAGCGCATCGCGCCCATCGATCACTACCCCAACCTGCTGCTGGACACGCTCAAGAGCGCCAGCCCACTGGACAACCCCACCGCGGTGCTGCTCACGCCCGGCCGTTTCAACAGCGCCTATTTC  <  NC_002947/3078728‑3078582                                                                                                                                                                                                                                                                      CGCTGTTGTAACGGCCGGGGGTGAGCTGCACCGCGGTGGGGTTGGCCAGTGGGCTGGCGCTCTTGAGCGTGTCCAGGTGCAGGTTGGGGTAGTGATCGATGGGCGCGATGCGCGTGTTCCCCGAACTGTTTGCCGCCCAGCGCATCGCG                                                                                                                 <  2:325787/149‑1                                CGCGGTGGGGTTGTCCAGTGGGCTGGCGCTCTTGAGCGTGTCCAGCAGCAGGTTGGGGTAGTGATCGATGGGCGCGATGCGCCTGTTCCCCGAACTGTTTGCCGCCCAGCGCATCGC                                                                                                                  <  1:356561/117‑1                                CGCGGTGGGGTTGTCCAGTGGGCTGGCGCTCTTGAGCGTGTCCAGCAGCAGGTTGGGGTAGTGATCGATGGGCGCGATGCGCCTGTTCCCCGAACTGTTTGCCGCCCAGCGCATCGC                                                                                                                  >  2:356561/1‑117                                                                                                                GCCTGTTCCCCGAACTGTTTGCCGCCCAGCGCATCGCGCCCATCGATCACTACCCCAACCTGCTGCTGGACATGCTCAAGAGCGCCAGCCCACTGGACAACCCCACCGCGGTGCTGCTCACGCCCGGCCGTTTCAACAGCGCCTATTTC  >  4:318655/1‑149                                                                                                                GCCTGTTCCCCGAACTGTTTGCCGCCCAGCGCATCGCGCCCATCGATCACTACCCCAACCTGCTGCTGGACACGCTCAAGAGCGCCAGCCCACTGGACAACCCCACCGCGGTGCTGCTCACGCCCGGCCGTTTCAACAGCGCCTATTT   <  7:52216/148‑1                                                                                                                GCCTGTTCCCCGAACTGTTTGCCGCCCAGCGCATCGCGCCCATCGATCACTACCCCAACCTGCTGCTGGACACGCTCAAGAGCGCCAGCCCACTGGACAACCCCACCGCGGTGCTGCTCACGCCCGGCCGTTTCAACAGCGCCTATTT   >  8:52216/1‑148                                                                                                                GCCTGATCCCCGAACTGTTTGCCGCCCAGCGCATCGCGCCCATCGATCTCTACCCCAACCTGCTGCTGGACACGCTCAAGAGCGCCAGCCCACTGGACAACCCCACCGCGGTGCTGCTCACGCCCGGCCGTTTCAACAGCGCCTATTTC  <  7:341706/149‑1                                                                                                                                                                                                                                                                      CGCTGTTGAAACGGCCGGGCGTGAGCAGCACCGCGGTGGGGTTGTCCAGTGGGCTGGCGCTCTTGAGCGTGTCCAGCAGCAGGTTGGGGTAGTGATCGATGGGCGCGATGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3078590‑3078702 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gatgcgcCTGTTCCCCGAACTGTTTGCCGCCCAGCGCATCGCGCCCATCGATCACTACCCCAACCTGCTGCTGGACACGCTCAAGAGCGCCAGCCCACTGGACAACCCCACCGCGGTGCTGCTCACGCCCGGCCGTTTCAACAGCGCCTATTTC  <  NC_002947/3078728‑3078582

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.