| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 3784426 | 45 (0.790) | 4 (0.070) | 3/246 | NT | 8.8% | coding (750/822 nt) | nikE | nickel ABC transporter ATP‑binding protein |
| ? | NC_002947 | = 3784484 | 40 (0.750) | coding (808/822 nt) | nikE | nickel ABC transporter ATP‑binding protein | |||||
AGCGCAGCGGCACCGCTTTCGTGCTGATCAGCCATGACCTGAGCCTGGTGCAGTACTTCTGCCAGCGGGTTGTGCTGCTGCACGGCGGGCGCATCGTGGAGGAACGCCCCGTCACGCACGACCTGTGCTTTGCGCACCCCGTGGGCCGGCAGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3784272‑3784426‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcagctgTTGGCAGGCCTTGCGGTGATGGCCTCCTCTGCGGGCGCACAGGCAACACCGCCGCCTGCAGCTGCCGGCCCACGGGGTGCGCAAAGCACAGGTCGTGCGTGACGGGGCGTTCCTCCACGATGCGCCCGCCGTGCAGCAGCAC < NC_002947/3784484‑3784343 AGCGCAGCGGCACCGCTTTCGTGCTGATCAGCCATGACCTGAGCCTGGTGCAGTACTTCTGCCAGCGGGTTGTGCTGCTGCACGGCGGGCGCATCGTGGAGGAACGCCCCGTCACGCACGACCTGTGCTTTGCGCACCCCGTGGGCCGG > 1:206055/1‑149AGCGCAGCGGCACCGCTTTCGTGCTGATCAGCCATGACCTGAGCCTGGTGCAGTACTTCTGCCAGCGGGTTGTGCTGCTGCACGGCGGGCGCATCGTGGAGGAACGCCCCGTCACGCACGACCTGTGCTTTGCGCACCCCGTGGGCCGG > 4:13977/1‑149 GCGCAGCGGCACCGCTTTCGTGCTGATCAGCCATGACCTGAGCCTGGTGCAGTACTTCTGCCAGCGGGTTGTGCTGCTGCACGGCGGGCGCATCGTGGAGGAACGCCCCGTCACGCACGACCTGTGCTTTGCGCACCCCGTGGGCCGG > 5:73056/1‑148 GCAGCGGCACCGCTTTCGTGCTGATCAGCCATGACCTGAGCCTGGTGCAGTACTTCTGCCAGCGGGTTGTGCTGCTGCACGGCGGGCGCATCGTGGAGGAACGCCCCGTCACGCACGCCCTGTGCGTTGAGCACCCCGTGGGCCGGCAG > 8:160991/1‑149 CCTGGTGCAGTACTTCTGCCAGCGGGTTGTGCTGCTGCACGGCGGGCGCATCGTGGAGGAACGCCCCGTCACGCACGACCTGTGCTTTGCGCACCCCGTGGGCCGGCAGCTGTTGGCAGGCCTTGCGGTGATGGCCTCCTCTGCGGGCG > 3:96848/1‑149 TGCTGCTGCACGGCGGGCGCATCGTGGAGGAACGCCCCGTCACGCACGACCTGTGCTTTGCGCACCCCGTGGGCCGGCAGCTGTTGGCAGGCCTTGCGGTGATGGCCTCCTCTGCGGGCGCACAGGCAACACCGCCGCCTGCAGCTGC < 7:303099/148‑1 CTGCTGCACGGCGGGCGCATCGTGGAGGAACGCCCCGTCACGCACGACCTGTGCTTTGCGCACCCCGTGGGCCGGCAGCTGTTGGCAGGCCTTGCGGTGATGGCCTCCTCTGCGGGCGCACAGGCAACACCGCCGCCTGCAGCTGCCG < 2:290316/148‑1 CTGCTGCACGGCGGGCGCATCGTGGAGGAACGCCCCGTCACGCACGACCTGTGCTTTGCGCACCCCGTGGGCCGGCAGCTGTTGGCAGGCCTTGCGGTGATGGCCTCCTCTGCGGGCGCACAGGCAACACCGCCGCCTGCAGCTGCCG < 4:96848/148‑1 CTGCACGGCGGGCGCATCGTGGAGGAACGCCCCGTCACGCACGACCTGTGCTTTGCGCACCCCGTGGGCCGGC > 5:204108/1‑73 CTGCACGGCGGGCGCATCGTGGAGGAACGCCCCGTCACGCACGACCTGTGCTTTGCGCACCCCGTGGGCCGGC < 6:204108/73‑1 GCAGCTGTTGGCAGGCCTTGCGGTGATGGCCTCCTCTGCGGGCGCACAGGCAACACCGCCGCCTGCAGCTGCCGGCCCACGGGGTGCGCAAAGCACAGGTCGTGCGTGACGGGGCGTTCCTCCACGATGCGCCCGCCGTGCAGCAGCA > 6:73056/1‑148 CAGCTGTTGGCAGGCCTTGCGGTGACGGCCTACTCTGCGGGCGCACAGGCAACACCGCCGCCTGCAGCTGCCGGCCCACGGGGTGCGCAAAGCACAGGTCGTGCGTGACGGGGCGTTCCTCCACGATGCGCCCGCCGTGCAGCAGCAC > 2:134010/1‑148 AGCGCAGCGGCACCGCTTTCGTGCTGATCAGCCATGACCTGAGCCTGGTGCAGTACTTCTGCCAGCGGGTTGTGCTGCTGCACGGCGGGCGCATCGTGGAGGAACGCCCCGTCACGCACGACCTGTGCTTTGCGCACCCCGTGGGCCGGCAGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3784272‑3784426‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcagctgTTGGCAGGCCTTGCGGTGATGGCCTCCTCTGCGGGCGCACAGGCAACACCGCCGCCTGCAGCTGCCGGCCCACGGGGTGCGCAAAGCACAGGTCGTGCGTGACGGGGCGTTCCTCCACGATGCGCCCGCCGTGCAGCAGCAC < NC_002947/3784484‑3784343 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |