New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3838086	50 (0.880)	3 (0.060)	3/248	NT	5.8%	coding (1681/2673 nt)	PP_3388	hypothetical protein
	?	NC_002947	= 3838149	49 (0.910)					coding (1744/2673 nt)	PP_3388	hypothetical protein

GGCCGAACCGCCGTCAGCGTCATCCTTCGCCCTGCCGGAAGCGCTTGCCAGGCAAGCCCATGCCGCTGCCAATGCCTTTGGGCGCATCAACACCCTGTACGAACAGATGCAGGCACAGAGCAGCACGGCCAGCATCGGCCTGTATGCCTGGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3837935‑3838086 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cctggtGCAGCGCGCGGTCCATGCTGTTGGGGGTGGCGGTGCGCAGCACTTGCCGCCCCAGCGCGACGTACCAGGCATACAGGCCGATGCTGGCCGTGCTGCTCTGTGCCTGCATCTGTTCGTACAGGGTGTTGATGCGCCCAAAGGCATT  <  NC_002947/3838149‑3838005                                                                                                                                                                                                                                                                                                           GGCCGAACCGCCGTCAGCGTCATCCTTCGCCCTGCCGGAAGCGCTTGCCAGGCAAGCCCATGCCGCTGCCAATGCCTTTGGGCGCATCAACACCCTGTACGAACAGATGCAGGCACAGAGCAGCACGGCCAGCATCGGCCTGTATGCCT                                                                                                                                                      <  6:98797/149‑1                                      GAAGCGCTTGCCAGGCAAGCCCATGCCGCTGCCAATGCCTTTGGGCGCATCAACACCCTGTACGAACAGATGCAGGCACAGAGCAGCACGGCCAGCATCGGCCTGTATGCCTGGT                                                                                                                                                   >  1:89016/1‑115                                      GAAGCGCTTGCCAGGCAAGCCCATGCCGCTGCCAATGCCTTTGGGCGCATCAACACCCTGTACGAACAGATGCAGGCACAGAGCAGCACGGCCAGCATCGGCCTGTATGCCTGGT                                                                                                                                                   <  2:89016/115‑1                                                                        ATGCCTTTGGGCGCATCAACACCCTGTACGAACAGATGCAGGCACAGAGCAGCACGGCCAGCATCGGCCTGTATGCCTGGTGCAGCGCGCGGTCCATGCTGTTGGGGGTGGCGGTGCGCAGCACTTGCCGCCCCAGCGCGACGTACCAG                                                                               <  3:104829/149‑1                                                                                  GCGCATCAACACCCTGTACGAACAGATGCAGGCACAGAGCAGCACGGCCAGCATCGGCCTGTATGCCTGGTGCAGCGCGCGGTCCATGCTGTTGGGGGTGGCGGTGCGCAGCACTTGCCGCCCCAGCGCGACGTACCAGGC                                                                             >  1:346371/1‑141                                                                                  GCGCATCAACACCCTGTACGAACAGATGCAGGCACAGAGCAGCACGGCCAGCATCGGCCTGTATGCCTGGTGCAGCGCGCGGTCCATGCTGTTGGGGGTGGCGGTGCGCAGCACTTGCCGCCCCAGCGCGACGTACCAGGC                                                                             <  2:346371/141‑1                                                                                                                                                       GTGCAGCGCGCGGTCCATGCTGTTGGGGGTGGCGGTGCGCAGCACTTGCCGCCCCAGCGCGACGTACCAGGCATACAGGCCGATGCTGGCCGTGCTGCTCTGTGCCTGCATCTGTTCGTACAGGGTGTTGATGCGCCCAAAGGCATT  <  5:143212/147‑1                                                                                                                                                                                                                                                                                                           GGCCGAACCGCCGTCAGCGTCATCCTTCGCCCTGCCGGAAGCGCTTGCCAGGCAAGCCCATGCCGCTGCCAATGCCTTTGGGCGCATCAACACCCTGTACGAACAGATGCAGGCACAGAGCAGCACGGCCAGCATCGGCCTGTATGCCTGGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3837935‑3838086 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cctggtGCAGCGCGCGGTCCATGCTGTTGGGGGTGGCGGTGCGCAGCACTTGCCGCCCCAGCGCGACGTACCAGGCATACAGGCCGATGCTGGCCGTGCTGCTCTGTGCCTGCATCTGTTCGTACAGGGTGTTGATGCGCCCAAAGGCATT  <  NC_002947/3838149‑3838005

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.