New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 383808650 (0.880)3 (0.060) 3/248 NT 5.8% coding (1681/2673 nt) PP_3388 hypothetical protein
?NC_002947 = 3838149 49 (0.910)coding (1744/2673 nt) PP_3388 hypothetical protein

AACCGCCGTCAGCGTCATCCTTCGCCCTGCCGGAAGCGCTTGCCAGGCAAGCCCATGCCGCTGCCAATGCCTTTGGGCGCATCAACACCCTGTACGAACAGATGCAGGCACAGAGCAGCACGGCCAGCATCGGCCTGTATGCCTGGTACGTCGCGCTGGGGCGGCAAGTGCTGCGCACCGCCACCCCCAACAGCATGGACCGCGCGCTGCACCAGGGTTTGCGGCTGACTTTGTTCGCTTCGGTGCATGAAACGGCTGTCGATATTCGCCTGAGTGAAGCTGCACGTAGCGG  >  NC_002947/3837940‑3838231
                                                                                                                                                   |                                                                                                                                                 
aaCCGCCGTCAGCGTCATCCTTCGCCCTGCCGGAAGCGCTTGCCAGGCAAGCCCATGCCGCTGCCAATGCCTTTGGGCGCATCAACACCCTGTACGAACAGATGCAGGCACAGAGCAGCACGGCCAGCATCGGCCTGTATGCCTGGTAc                                                                                                                                                 >  2:66479/1‑149 (MQ=37)
    gccgTCAGCGTCATCCTTCGCCCTGCCGGAAGCGCTTGCCAGGCAAGCCCATGCCGCTGCCAATGCCTTTGGGCGCATCAACACCCTGTACGAACAGATGCAGGCACAGAGCAGCACGGCCAGCATCGGCCTGTATGCCTGGTACGTcg                                                                                                                                             <  3:227217/149‑1 (MQ=37)
           gCGTCATCCTTCGCCCTGCCGGAAGCGCTTGCCAGGCAAGCCCATGCCGCTGCCAATGCCTTTGGGCGCATCAACACCCTGTACGAACAGATGCAGGCACAGAGCAGCACGGCCAGCATCGGCCTGTATGCCTGGTACGTCGCGCTggg                                                                                                                                      <  6:43511/149‑1 (MQ=39)
              tcatcaTTCGCCCTGCAGGAAGCGCTTGCCAGGCAAGCCCATGCCGCTGCCAATGCCTTTGGGCGCATCAACACCCTGTACGAACAGATGCAGGCACAGAGCAGCACGGCCAGCATCGGCCTGTATGCATGGTACGTCGCGCTGGggcg                                                                                                                                   >  6:140593/1‑149 (MQ=255)
                aTCCTTCGCCCTGCCGGAAGCGCTTGCCAGGCAAGCCCATGCCGCTGCCAATGCCTTTGGGCGCATCAACACCCTGTACGAACAGATGCAGGCACAGAGCAGCACGGCCAGCATCGGCCTGTATGCCTGGTACGTCGCGCTGGggcgg                                                                                                                                  >  1:158957/1‑148 (MQ=39)
                       gCCCTGCCGGAAGCGCTTGCCAGGCAAGCCCATGCCGCTGCCAATGCCTTTGGGCGCATCAACACCCTGTACGAACAGATGCAGGCACAGAGCAGCACGGCCAGCATCGGCCTGTATGCCTGGTACGTCGCGCTGGGGCGGCAAGtgct                                                                                                                          <  5:327451/149‑1 (MQ=39)
                         ccTTCCGGAAGCGCTTGACAGGCAAGCCCATGCCGCTGCCAATGCCTTTGGGCGCATCAACACCCTGTACGAACAGATGCAGGCACAGAGCAGCACGGCCAGCATCGGCCTGTATGCCTGGTACGTCGCGCTGGGGCGGCAAGtgctg                                                                                                                         <  6:252171/148‑1 (MQ=255)
                             ccGGAAGCGCTTGCCAGGCAAGCCCATGCCGCTGCCAATGCCTTTGGGCGCATCAACACCCTGTACGAACAGATGCAGGCACAGAGCAGCACGGCCAGCATCGGCCTGTATGCCTGGTACGTCGCGCTGGGGCGGCAAGTGCTGCGCAc                                                                                                                    <  5:285480/149‑1 (MQ=39)
                              cGGAAGCGCTTGCCAGGCAAGCCCATGCCGCTGCCAATGCCTTTGGGCGCATCAACACCCTGTACGAACAGATGCAGGCACAGAGCAGCACGGCCAGCATCGGCCTGTATGCCTGGTACGTCGCGCTGGGGCGGCAAGTGCTGCGCAcc                                                                                                                   >  2:198281/1‑149 (MQ=39)
                                gAAGCGCTTGCCAGGCAAGCCCATGCCGCTGCCAATGCCTTTGGGCGCATCAACACCCTGTACGAACAGATGCAGGCACAGAGCAGCACGGCCAGCATCGGCCTGTATGCCTGGT                                                                                                                                                   <  2:89016‑M1/115‑1 (MQ=255)
                                gAAGCGCTTGCCAGGCAAGCCCATGCCGCTGCCAATGCCTTTGGGCGCATCAACACCCTGTACGAACAGATGCAGGCACAGAGCAGCACGGCCAGCATCGGCCTGTATGCCTGGT                                                                                                                                                   >  1:89016‑M1/1‑115 (MQ=255)
                                         gCCAGGCAAGCCCATGCCGCTGCCAATGCCTTTGGGCGCATCAACACCCTGTACGAACAGATGCAGGCACAGAGCAGCACGGCCAGCATCGGCCTGTATGCCTGGTACGTCGCGCTGGGGCGGCAAg                                                                                                                              <  5:194510/127‑1 (MQ=40)
                                         gCCAGGCAAGCCCATGCCGCTGCCAATGCCTTTGGGCGCATCAACACCCTGTACGAACAGATGCAGGCACAGAGCAGCACGGCCAGCATCGGCCTGTATGCCTGGTACGTCGCGCTGGGGCGGCAAg                                                                                                                              >  6:194510/1‑127 (MQ=40)
                                         gCCAGGCAAGCCCATGCCGCTGCCAATGCCTTTGGGCGCATCAACACCCTGTACGAACAGATGCAGGAACAGAGCAGCACGGCCAGCATCGGCCTGTATGCCTTGTACGTCGCGCTGGGGCGGCAAGTGCTgcgc                                                                                                                      <  2:288168/135‑1 (MQ=255)
                                         gCCAGGCAAGCCCATGCCGCTGCCAATGCCTTTGGGCGCATCAACACCCTGTACGAACAGATGCAGGAACAGAGCAGCACGGCCAGCATCGGCCTGTATGCCTGGTACGTCGCGCTGGGGCGGCAAGTGCTgcgc                                                                                                                      >  1:288168/1‑135 (MQ=255)
                                            aGGCAAGCCCATGCCGCTGCCAATGCCTTTGGGCGCATCAACACCCTGTACGAACAGATGCAGGCACAGAGCAGCACGGCCAGCATCGGCCTGTATGCCTGGTACGTCGCGCTGGGGCGGCAAGTGCTGCGCACCGCCACCCCCAACAg                                                                                                     <  1:174147/149‑1 (MQ=255)
                                                           gCTGCCAATGCCTTTGGGCGCATCAACACCCTGTACGAACAGATGCAGGCACAGAGCAGCACGGCCAGCATCGGCCTTTATGCCTGGTACGTCGCGCTGGGGCGGCAAGTGCTGCGCACCGCCACCCCCAACAGCATg                                                                                                 <  7:345786/138‑1 (MQ=255)
                                                           gCTGCCAATGCCTTTGGGCGCATCAACACCCTGTACGAACAGATGCAGGCACAGAGCAGCACGGCCAGCATCGGCCTGTATGCCTGGTACGTCGCGCTGGGGCGGCAAGTGCTGCGCACCGCCACCCCCAACAGCATg                                                                                                 >  8:345786/1‑138 (MQ=40)
                                                            cTGCCAATGCCTTTGGGCGCATCAACACCCTGTACGAACAGATGCAGGCACAGAGCAGCACGGCCAGCGTCGGCCTGTATGCCTGGTACGTCGCGCTGGGGCGGCAAGTGCTGCGCACCGCCACCCCCAACAGCATGGa                                                                                               >  6:79468/1‑139 (MQ=255)
                                                                cAATGCCTTTGGGCGCATCAACACCCTGTACGAACAGATGCAGGCACAGAGCAGCACGGCCAGCATCGGCCTGTATGCCTGGTACGTCGCGCTGGGGCGGCAAGTGCTGCGCACCGCCACCCCCAACAGCa                                                                                                   <  1:328587/131‑1 (MQ=40)
                                                                cAATGCCTTTGGGCGCATCAACACCCTGTACGAACAGATGCAGGCACAGAGAAGCACGGCCAGCATCGGCCTGTATGCCTGGTACGTCGCGCTGGGGCGGCAAGTGCTGCGCACCGCCACCCCCAACAGCa                                                                                                   >  2:328587/1‑131 (MQ=255)
                                                                 aaTGCCTTTGGGCGCATCAACACCCTGTACGAACAGATGCAGGCACAGAGCAGCACGGCCAGCATCGGCCTGTATGCCTGGTACGTCGCGCTGGGGCGGCAAGTGCTGCGCACCGCCACCCCCAACAGCATGGACCGCGCGCTGCac                                                                                  <  5:143212‑M2/147‑3 (MQ=255)
                                                                  aTGCCTTTGGGCGCATCAACACCCTGTACGAACAGATGCAGGCACAGAGCAGCACGGCCAGCATCGGCCTGTATGCCTGGTgcagcgcgcggtccatgctgttgggggtggcggtgcgcagcacttgccgccccagcgcgacgtaccag                                                                               <  3:104829‑M1/149‑69 (MQ=255)
                                                                      cTTTGGGCGCATCAACACCCTGTACGAACAGATGCAGGCACAGAGCAGCACGGCCAGCATCGGCCTGTATGCCTGGTACGTCGCGCTGGGGCGGCAAGTGCTGCGCACCGCCACCCCCAACAGCATGGAc                                                                                              >  2:185766/1‑130 (MQ=40)
                                                                      cTTTGGGCGCATCAACACCCTGTACGAACAGATGCAGGCACAGAGCAGCACGGCCAGCATCGGCCTGTATGCCTGGTACGTCGCGCTGGGGCGGCAAGTGCTGCGCACCGCCACCCCCAACAGCATGGAc                                                                                              <  1:185766/130‑1 (MQ=40)
                                                                          gggCGCATCAACACCCTGTACGAACAGATGCAGGCACAGAGCAGCACGGCCAGCATCGGCCTGTATGCCTGGTACGTCGCGCTGGGGCGGCAAGTGCTGCGCACCGCCACCCCCAACAGCATGGACCGCGCGCTGCACCAGGGTTTGCg                                                                       >  5:219472/1‑149 (MQ=255)
                                                                            gcgcATCAACACCCTGTACGAACAGATGCAGGCACAGAGCAGCACGGCCAGCATCGGCCTGTATGCCTGGTgcagcgcgcggtccatgctgttgggggtggcggtgcgcagcacttgccgccccagcgcgacgtaccaggc                                                                             <  2:346371‑M1/141‑71 (MQ=255)
                                                                            gcgcATCAACACCCTGTACGAACAGATGCAGGCACAGAGCAGCACGGCCAGCATCGGCCTGTATGCCTGGTgcagcgcgcggtccatgctgttgggggtggcggtgcgcagcacttgccgccccagcgcgacgtaccaggc                                                                             >  1:346371‑M1/1‑71 (MQ=255)
                                                                            gcacATCAACACCCTGTACGAACAGATGCAGGCACAGAGCAGCACGGCCAGCATCGGCCTGTATGCCTGGTACGTCGCGCTGGGGCGGCAAGTGCTGCGCACCGCCACCCCCAACAGCATGGACCGCGCGCTGCACCAGGGTTTGCGGc                                                                     >  2:222703/4‑149 (MQ=255)
                                                                               cATCAACACCCTGTACGAACAGATGCAGGCACAGAGCAGCACGGCCAGCATCGGCCTGTATGCCTGGTACGTCGCGCTGGGGCGGCAAGTGCTGCGCACCGCCACCCCCAACAGCATGGACCGCGCGCTGCACCAGGGTTTGCGGCTGa                                                                  <  1:66479/149‑1 (MQ=255)
                                                                                   aaCACCCTGTACGAACAGATGCAGGCACAGAGCAGCACGGCCAGCATCGGCCTGTATGCCTGGTACGTCGCGCTGGGGCGGCAAGTGCTGCGCACCGCCACCCCCAACAGCATGGACCTCGCGCTGCACCAGGGTTTGCGGCTGACttt                                                              <  5:140593/149‑1 (MQ=255)
                                                                                    acacCCTGTACGAACAGATGCAGGCACAGAGCAGCACGGCCAGCATCGGCCTGTATGCCTGGTACGTCGCGCTGGGGCGGCAAGTGCTGCGCACCGCCACCCCCAACAGCATGGACCGCGCGCTGCACCAGGGTTTGCgg                                                                      <  7:74505/140‑1 (MQ=255)
                                                                                    acacCCTGTACGAACAGATGCAGGCACAGAGCAGCACGGCCAGCATCGGCCTGTATGCCTGGTACGTCGCGCTGGGGCGGCAAGTGCTGCGCACCGCCACCCCCAACAGCATGGACCGCGCGCTGCACCAGGGTTTGCgg                                                                      >  8:74505/1‑140 (MQ=255)
                                                                                    acacCCTGTACGAACAGATGAAGGCACAGAGCAGCACGGCCAGCATCGGCCTGTATGCCTGGTACGTCGCGCTGGGGCGGCAAGTGCTGCGCACCGCCACCCCCAACAGCATGGACCGCGCGCTGAACCAGGGTTTGCGGCTGACTATg                                                             >  6:239528/1‑149 (MQ=255)
                                                                                       cccTGTACGAACAGATGCAGGCACAGAGCAGCACGGCCAGCATCGGCCTGTATGCCTGGTACGTCGCGCTGGGGCGGCAAGTGCTGCGCACCGCCACCCCCAACAGCATGGACCGCGCGCTTCACCAGGGTTTGCGGCTGACTTTGTTc                                                          <  5:239528/149‑1 (MQ=255)
                                                                                        ccTGTACGAACAGATGCAGGCACAGAGCAGCACGGCCAGCATCGGCCTGTATGCCTGGTACGTCGCGCTGGGGCGGCAAGTGCTGCGCACCGCCACCCCCAACAGCATGGACcgcgc                                                                                         <  5:116995/117‑1 (MQ=255)
                                                                                        ccTGTACGAACAGATGCAGGCACAGAGCAGCACGGCCAGCATCGGCCTGTATGCCTGGTACGTCGCGCTGGGGCGGCAAGTGCTGCGCACCGCCACCCCCAACAGCATGGACcgcgc                                                                                         >  6:116995/1‑117 (MQ=255)
                                                                                        ccTGTACGAACAGATGCAGGCACAGAGCAGCACGGCCAGCATCGGCCTGTATGCCTGGTACGTCGCGCTGGGGCGGCAAGTGCTGCGCACCGCCACCCCCAACAGCATGGACCGCGCGCTGCACCAGGGTTTGCGGCTGACTTTGTTCg                                                         >  4:98662/1‑149 (MQ=255)
                                                                                            tACGAACAGATGCAGGCACAGAGCAGCACGGCCAGCATCGGCCTGTATGCCTGGTACGTCGCGCTGGGGCGGCAAGTGCTGCGCACCGCCACCCCCAACAGCATGGACCGCGCGCTGCACCAGGGTTTGCGGCTGACTTTGTTCGCTTc                                                     <  2:158957/149‑1 (MQ=255)
                                                                                               gAACAGATGCAGGCACAGAGCAGCACGGCCAGCATCGGCCTGTATGCCTGGTACGTCGCGCTGGGGCGGCAAGTGCTGCGCACCGCCACCCCCAACAGCATGGACCGCGCGCTGCACCAGGGTTTGCGGCTGACTTTGTTCGCTTCGGt                                                  >  2:40830/1‑149 (MQ=255)
                                                                                                 aCAGATGCAGGCACAGAGCAGCACGGCCAGCATCGGCCTGTATGCCTGGTACGTCGCGCTGGGGCGGCAAGTGCTGCGCACCGCCACCCCCAACAGCATGGACCGCGCGCTGCACCAGGGTTTGCGGCt                                                                    >  8:131777/1‑129 (MQ=40)
                                                                                                 aCAGATGCAGGCACAGAGCAGCACGGCCAGCATCGGCCTGTATGCCTGGTACGTCGCGCTGGGGCGGCAAGTGCTGCGCACCGCCACCCCCAACAGCATGGACCGCGCGCTGCACCAGGGTTTGCGGCt                                                                    <  7:131777/129‑1 (MQ=40)
                                                                                                         aGGCACAGAGCAGCACGGCCAGCATCGGCCTGTATGCCTGGTACGTCGCGCTGGGGCGGCAAGTGCTGCGCACCGCCACCCCCAACAGCATGGACCGCGCGCTGCACCAGAGTTTGCGGCTGAGTTTGTTCGGTTCGGTGCATGAAACg                                        >  4:245141/1‑149 (MQ=255)
                                                                                                             acaGAGCAGCACGGCCAGCATCGGCCTGGTATGCCTGGTACGTCGCGCTGGGGCGGCAAGTGCTGCGCACCGCCACCCCCAACAGCATGGACCGCGCGCTGCACCAGGGTTTGCGGCTGACTTTGTTCGCTTCGGTGCATGAAACgg                                       >  1:21587/1‑147 (MQ=255)
                                                                                                             acaGAGCAGCACGGCCAGCATCGGCCTGTATGCCTGGTACGTCGCGCTGGGGCGGCAAGTGCTGCGCACCGCCACCCCCAACAGCATGGACCGCGCGCTGCACCAGGGTTTGCGGCTGACTTTGTTCGCTTCGGTGCATGAAACgg                                       <  2:21587/146‑1 (MQ=39)
                                                                                                              caGAGCAGCACGGCCAGCATCGGCCTGTATGCCTGGTACGTCGCGCTGGGGCGGCAAGTGCTGCGCACCGCCACCCCCAACAGCATGGACCGCGCGCTGCACCAGGGTTTGCGGCTGACTTTGTTCGCTTCGGTGCATGAAACGGTTGt                                   <  1:222703/149‑1 (MQ=255)
                                                                                                               agagCAGCACGGCCAGCATCGGCCTGTATGCCTGGTACGTCGCGCTGGGGCGGCAAGTGCTGCGCACCGCCACCCCCAACAGCATGGACCGCGCGCTGCACCAGGGTTTGCGGCTGACTTTGTTCGCTTCGGTGCATGAAACGGCTGTc                                  >  6:17360/1‑149 (MQ=39)
                                                                                                                gagCAGCACGGCCAGCATCGGCCTGTATGCCTGGTACGTCGCGCTGGGGCGGCAAGTGCTGCGCACCGCCACCCCCAACAGCATGGACCGCGCGCTGCACCAGGGTTTGCGGCTGACTTTGTTCGCTTCGGTGCATGAAACGGCTGTc                                  >  1:139904/1‑148 (MQ=39)
                                                                                                                 agcagcACGGCCAGCATCGGCCTGTATGCCTGGTACGTCGCGCTGGGGCGGCAAGTGCTGCGCACCGCCACCCCCAACAGCATGGACCGCGCGCTGCACCAGGGTTTGCGGCTGACTTTGTTCGCTTCGGTGCATGAAACGGCTGTCGa                                <  5:17360/149‑1 (MQ=39)
                                                                                                                       aCGGCCAGCATCGGCCTGTATGCCTGGTACGTCGCGCTGGGGCGGCAAGTGCTGCGCACCGCCACCCCCAACAGCATGGACCGCGCGCTGCACCAGGGTTTGCGGCTGACTTTGTTCGCTTCGGTGCATGAAACGGCTGTCGATATTCg                          <  1:198281/149‑1 (MQ=39)
                                                                                                                        cGGCCAGCATCGGCCTGTATGCCTGGTACGTCGCGCTGGGGCGGCAAGTGCTGCGCACCGCCACCCCCAACAGCATGGACCGCGCGCTGCACCAGGGTTTGCGGCTGACTTTGTTCGCTTCGGTGCATGAAACGGCTGTCGATATTCGc                         <  6:219472/149‑1 (MQ=39)
                                                                                                                          gCCAGCATCGGCCTGTATGCCTGGTACGTCGCGCTGGGGCGGCAAGTGCTGCGCACCGCCACCCCCAACAGCATGGACCGCGCGCTGCACCAGGGTTTGCGGCTGACTTTGTTCGCTTCGGTGCATGAAACGGCTGTCGATATTCGCCt                       <  3:98662/149‑1 (MQ=39)
                                                                                                                                 tCGGCCTGTATGCCTGGTACGTCGCGCTGGGGCGGCAAGTGCTGCGCACCGCCACCCCCAACAGCATGGACCGCGCGCTGCACCAGGGTTTGCGGCTGACTTTGTTCGCTTCGGTGCATGAAACGGCTGTCGATATTCGCCTGAGTGaa                <  7:68894/149‑1 (MQ=39)
                                                                                                                                    gCCTGTATGCCTGGTACGTCGCGCTGGGGCGGCAAGTGCTGCGCACCGCCACCCCCAACAGCATGGACCGCGCGCTGCACCAGGGTTTGCGGCTGACTTTGTTCGCTTCGGTGCATGAAACGGCTGTc                                  <  6:186290/128‑1 (MQ=255)
                                                                                                                                    gCCTGTATGCCTGGTACGTCGCGCTGGGGCGGCAAGTGCTGCGCACCGCCACCCCCAACAGCATGGACCGCGCGCTGCACCAGGGTTTGCGGCTGACTTTGTTCGCTTCGGTGCATGAAACGGCTGTc                                  >  5:186290/1‑128 (MQ=255)
                                                                                                                                          tATGCCTGGTACGTCGCGCTGGGGCGGCAAGTGCTGCGCACCGCCACCCCCAACAGCATGGACCGCGCGCTGCACCAGGGTTTGCGGCTGACTTTGTTCGCTTCGGTGCATGAAACGGCTGTCGATATTCGCCTGAGTGAAGCTGCAc         <  6:143212/148‑1 (MQ=39)
                                                                                                                                             gCCTGGTACGTCGCGCTGGGGCGGCAAGTGCTGCGCACCGCCACCCCCAACAGCATGGACCGCGCGCTGCaccaggcatacaggccgatgctggccgtgctgctctgtgcctgcatctgttcgtacagggtgttgatgcgc             <  2:346371‑M2/141‑72 (MQ=255)
                                                                                                                                             gCCTGGTACGTCGCGCTGGGGCGGCAAGTGCTGCGCACCGCCACCCCCAACAGCATGGACCGCGCGCTGCaccaggcatacaggccgatgctggccgtgctgctctgtgcctgcatctgttcgtacagggtgttgatgcgc             >  1:346371‑M2/1‑70 (MQ=255)
                                                                                                                                             gCCTGGTACGTCGCGCTGGGGCGGCAAGTGCTGCGCACCGCCACCCCCAACAGCATGGACCGCGCGCTGCACCAGGGTTTGCGGCTGACTTTGTTCGCTTCGGTGCATGAAACGGCTGTCGATATTCGCCTGAGTGAAGCTGCACGTAg     >  7:338122/1‑149 (MQ=39)
                                                                                                                                               cTGGTACGTCGCGCTGGGGCGGCAAGTGCTGCGCACCGCCACCCCCAACAGCATGGACCGCGCGCTGCaccaggcatacaggccgatgctggccgtgctgctctgtgcctgcatctgttcgtacagggtgttgatgcgcccaaaggcat   <  3:104829‑M2/149‑82 (MQ=255)
                                                                                                                                                tGGTACGTCGCGCTGGGGCGGCAAGTGCTGCGCACCGCCACCCCCAACAGCATGGACCGCGCGCTGCACCAGGGTTTGCGGCTGACTTTGTTCGCTTCGGTGCATGAAACGGCTGTCGATATTCGc                         <  6:321903/126‑1 (MQ=40)
                                                                                                                                                tGGTACGTCGCGCTGGGGCGGCAAGTGCTGCGCACCGCCACCCCCAACAGCATGGACCGCGCGCTGCACCAGGGTTTGCGGCTGACTTTGTTCGCTTCGGTGCATGAAACGGCTGTCGATATTCGc                         >  5:321903/1‑126 (MQ=40)
                                                                                                                                                  gTgcagcgcgcggtccatgctgttgggggtggcggtgcgcagcacttgccgccccagcgcgacgtaccaggcatacaggccgatgctggccgtgctgctctgtgcctgcatctgttcgtacagggtgttgatgcgcccaaaggcatt  <  5:143212‑M1/147‑146 (MQ=255)
                                                                                                                                                   |                                                                                                                                                 
AACCGCCGTCAGCGTCATCCTTCGCCCTGCCGGAAGCGCTTGCCAGGCAAGCCCATGCCGCTGCCAATGCCTTTGGGCGCATCAACACCCTGTACGAACAGATGCAGGCACAGAGCAGCACGGCCAGCATCGGCCTGTATGCCTGGTACGTCGCGCTGGGGCGGCAAGTGCTGCGCACCGCCACCCCCAACAGCATGGACCGCGCGCTGCACCAGGGTTTGCGGCTGACTTTGTTCGCTTCGGTGCATGAAACGGCTGTCGATATTCGCCTGAGTGAAGCTGCACGTAGCGG  >  NC_002947/3837940‑3838231

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.