| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 4031446 | 44 (0.780) | 3 (0.060) | 3/246 | NT | 6.5% | coding (1109/1770 nt) | PP_3554 | acyl‑CoA dehydrogenase family protein |
| ? | NC_002947 | = 4031526 | 45 (0.840) | coding (1189/1770 nt) | PP_3554 | acyl‑CoA dehydrogenase family protein | |||||
CCAACGAGCGCCTGCAGAGCCGCGCAGCGACTGGCCCGCAGGCACACGACAAGGCGGCCGACCCGATCATCCACCATGGTGATGTTCGGCGCATGCTGCTGACCATGCGCACCCTCACCGAAGCAGGTCGGGCGTTCGCCGTCTACGTTGGCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4031293‑4031446‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttggccaCCGGTGTCAGCAGTGCCACCAGGCGCTGGGCATGCTCGCGCTCGCCAGCGTCTTCGGCATAGCGTGCCACGTCCAGTTGCTGGCCAACGTAGACGGCGAACGCCCGACCTGCTTCGGTGAGGGTGCGCATGGTCAGCAGCATGCGCC < NC_002947/4031526‑4031380 CCAACGAGCGCCTGCAGAGCCGCGCAGCGACTGGCCCGCAGGCACACGACAAGGCGGCCGACCCGATCATCCACCATGGTGATGTTCGGCGCATGCTGCTGACCATGCGCACCCTCACAGAAGCAGGTCGGTCGATCGCCGTCTACGTT > 6:42381/1‑149 CAACGAGCGCCTGCAGAGCCGCGCAGCGACTGGCCCGCAGGCACACGACAAGGCGGCCGACCCGATCATCCACCATGGTGATGTTCGGCGCATGCTGCTGACCATGCGCACCCTCACCGAAGCAGGTCGGGCGTTCGCCGTCTACGTTG > 8:275750/1‑149 CGAGCGCCTGCAGAGCCGCGCAGCGACTGGCCCGCAGGCACACGACAAGGCGGCCGACCCGATCATCGACCATGGTGATGTTCGGCGCATGCTGCTGACCATGCGCACCCTCACCGAAGCAGGTCGGGCGTTCGCCGTCTACGTTGGCC < 1:38642/149‑1 CGAGCGCCTGCAGAGCCGCGCAGCGACTGGCCCGCAGGCACACGACAAGGCGGCCGACCCGATCATCCACCATGGTGATGTTCGGCGCATGCTGCTGACCATGCGCACCCTCACCGAAGCAGGTCGGGCGTTCGCCGTCTACGTTGGCC < 2:57025/149‑1 GAGCGCCTGCAGAGCCGCGCAGCGACTGGCCCGCAGGCACACGACAAGGCGGCCGACCCGATCATCCACCATGGTGATGTTCGGCGCATGCTGCTGACCATGCGCACCCTCACCGAAGCAGGTCGGGCGTTCGCCGTCTACGTTGGCCA < 5:88268/149‑1 ACGACAAGGCGGCCGACCCGATCATCCACCATGGTGATGTTCGGCGCATGCTGCTGACCATGCGCACCCTCACCGAAGCAGGTCGGGCGTTCGCCGTCTACGTTGGCCACCGGTGTCAGCAGTGCCACCAGGCGCTGGGCATGCTCGCG > 3:154739/1‑149 GCATGCTGCTGACCATGCGCACCCTCACCGAAGCAGGTCGGGCGTTCGCCGTCTACGTTGGCCACCGGTGTCAGCAGTGCCACCAGGCGCTGGGCATGCTCGCGCTCGCCAGCGTCTTCGGCATAGCGTGCCACGTCCAGTTGCTGGCC < 4:154739/149‑1 CTGCTGACCATGCGCACCCTCACCGAAGCAGGTCGGGCGTTCGCCGTCTACGTTGGCCACCGGTGTCAGCAGTGCCACCAGGCGCTGGGCATGCTCGCGCTCGCCAGCGTCTTCGGCATAGCGTGCCACGTCCAGTTGCTGGCCAACG < 3:192696/148‑1 CCACCGGTGTCAGCAGTGCCACCAGGCGCTGGGCATGCTCGCGCTCGCCAGCGTCTTCGGCATAGCGTGCCACGTCCAGTTGCTGGCCAACGTAGACGGCGAACGCCCGACCTGCTTCGGTGAGGGTGCGCATGGTCAGCAGCATGCGC > 7:149539/1‑149 CACCGGTGTCAGCAGTGCCACCAGGCGCTGGGCATGCTCGCGCTCGCCAGCGTCTTCGGCATAGCGTGCCACGTCCAGTTGCTGGCCAACGTAGACGGCGAACGCCCGACCTGCTTCGGTGAGGGTGCGCATGGTCAGCAGCATGCGCC > 2:33469/1‑149 ACCGGTGTCAGCAGTGCCACCAGGCGCTGGGCATGCTCGCGCTCGCCAGCGTCTTCGGCATAGCGTGCCACGTCCAGTTGCTGGCCAACGTAGACGGCGAACGCCCGACCTGCTTCGGTGAGGGTGCGCATGGTCAGCAGCATGCGCC > 6:84904/1‑148 CCAACGAGCGCCTGCAGAGCCGCGCAGCGACTGGCCCGCAGGCACACGACAAGGCGGCCGACCCGATCATCCACCATGGTGATGTTCGGCGCATGCTGCTGACCATGCGCACCCTCACCGAAGCAGGTCGGGCGTTCGCCGTCTACGTTGGCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4031293‑4031446‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttggccaCCGGTGTCAGCAGTGCCACCAGGCGCTGGGCATGCTCGCGCTCGCCAGCGTCTTCGGCATAGCGTGCCACGTCCAGTTGCTGGCCAACGTAGACGGCGAACGCCCGACCTGCTTCGGTGAGGGTGCGCATGGTCAGCAGCATGCGCC < NC_002947/4031526‑4031380 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |