New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 4031446 | 44 (0.780) | 3 (0.060) | 3/246 | NT | 6.5% | coding (1109/1770 nt) | PP_3554 | acyl‑CoA dehydrogenase family protein |
? | NC_002947 | = 4031526 | 45 (0.840) | coding (1189/1770 nt) | PP_3554 | acyl‑CoA dehydrogenase family protein |
GAGCGCCTGCAGAGCCGCGCAGCGACTGGCCCGCAGGCACACGACAAGGCGGCCGACCCGATCATCCACCATGGTGATGTTCGGCGCATGCTGCTGACCATGCGCACCCTCACCGAAGCAGGTCGGGCGTTCGCCGTCTACGTTGGCCAGCAACTGGACGTGGCACGCTATGCCGAAGACGCTGGCGAGCGCGAGCATGCCCAGCGCCTGGTGGCACTGCTGACACCGGTGGCCAAGGCATTCTTCACTGATAACGGCCTGGAAAGCTGCGTGCTTGGCCAGCAGGTGTATGGCGG > NC_002947/4031298‑4031593 | gAGCGCCTGCAGAGCCGCGCAGCGACTGGCCCGCAGGCACACGACAAGGCGGCCGACCCGATCATCCACCATGGTGATGTTCGGCGCATGCTGCTGACCATGCGCACCCTCACCGAAGCAGGTCGGGCGTTCGCCGTCTACGTTGGCCA < 5:88268‑M1/149‑1 (MQ=255) tGCAGAGCAGCGCAGCGACTGGCCCGCAGGCACACGACAAGGCGGCCGACCCGATCATCCCCCATGGTGATGTTCGGCGCATGCTGCTGACCATGCGCACCCTCCCCGAAGCAGGTCGGGCGTTCGCCGTCTACGTTGGCCAGCCACTg > 6:366752/1‑149 (MQ=255) gCAGAGCCGCGCAGCGACTGGCCCGCAGGCACACGACAAGGCGGCCGACCCGATCATCCACCATGGTGATGTTCGGCGCATGCTGCTGACCATGCGCACCCTCACCGAAGCAGGTCGGGCGTTCGCCGTCTACGTTGGCCAGCAACTgg > 3:98884/1‑149 (MQ=255) agCCGCGCAGCGACTGGCCCGCAGGCACACGACAAGGCGGCCGACCCGATCATCCACCATGGTGATGTTCGGCGCATGCTGCTGACCATGCGCACCCTCACCGAAGCAGGTCGGGCGTTCGCCGTCTACGTTGGCCAGCAACTGGACGt < 5:336294/149‑1 (MQ=255) agCCGCGCAGCGACTGGCCCGCAGGCACACGACAAGGCGGCCGACCCGATCATCCACCATGGTGATGTTCGGCGCATGCTGCTGACCATGCGCACCCTCACCGAAGCAGGTCGGGCGTTCGCCGTCTACGTTGGCCAGCAACTGGACGt < 7:99659/149‑1 (MQ=255) gCCCGCAGGCACACGACAAGGCGGCCGACCCGATCATCCACCATGGTGATGTTCGGCGCATGCTGCTGACCATGCGCACCCTCACCGAAGCAGGTCGGGCGTTCGCCGTCTACGTTGGCCAGCAACTGGACGTGGCACGCTATGCCg > 2:232775/1‑147 (MQ=255) gCCCGCAGGCACACGACAAGGCGGCCGACCCGATCATCCACCATGGTGATGTTCGGCGCATGCTGCTGACCATGCGCACCCTCACCGAAGCAGGTCGGGCGTTCGCCGTCTACGTTGGCCAGCAACTGGACGTGGCACGCTATGCCGaa < 1:232775/149‑1 (MQ=255) gCCCGCAGGCACACGACAAGGCGGCCGACCCGATCATCCACCATGGTGATGTTCGGCGCATGCTGCTGACCATGCGCACCCTCACCGAAGCAGGTCGGGCGTTCGCCGTCTACGTTGGCCAGCAACTGGACGTGGCACGCTATGCCGa < 4:98884/148‑1 (MQ=255) cccGCAGGCACACGACAAGGCGGCCGACCCGATCATCCACCATGGTGATGTTCGGCGCATGCTGCTGACCATGCGCACCCTCACCGAAGCAGGTCGGGCGTTCGCCGTCTACGTTGGCCAGCAACTGGACGTGGCACGCTATGCCGAAg < 8:115117/149‑1 (MQ=255) cAGGCACACGACAAGGCGGCCGACCCGATCATCCACCATGGTGATGTTCGGCGCATGCTGCTGACCATGCGCACCCTCACCGAAGCAGGTCGGGCGTTCGCCGTCTACGTTGGCCAGCAACTGGACGTGGCACGCTATGCCGAAGACGc < 5:91346/149‑1 (MQ=255) cAGGCACACGACAAGGCGGCCGACCCGATCATCCACCATGGTGATGTTCGGCGCATGCTGCTGACCATGCGCACCCTCACCGAAGCAGGTCGGGCGTTCGCCGTCTACGTTGGCCAGCAACTGGACGTGGCACGCTATGCCGAAGACGc < 5:42381/149‑1 (MQ=255) aGGCACACGACAAGGCGGCCGACCCGATCATCCACCATGGTGATGTTCGGCGCATGCTGCTGACCATGCGCACCCTCACCGAAGCAGGTCGGGCGTTCGCCGTCTACGTTGGCCAGCAACTGGACGTGGCACGCTATGCCGAAGACGCt < 8:284394/149‑1 (MQ=255) catacGACAAGGCGGCCGACCCGATCATCCACCATGGTGATGTTCGGCGCATGCTGCTGACCATGCGCACCCTCACCGAAGCAGGTCGGGCGTTCGCCGTCTACGTTGGCCAGCAACTGGACGTGGCACGCTATGCCGAAGACGCTGgc > 5:84904/4‑149 (MQ=255) cacGACAAGGCGGCCGACCCGATCATCCACCATGGTGATGTTCGGCGCATGCTGCTGACCATGCGCACCCTCACCGAAGCAGGTCGGGCGTTCGCCGTCTACGTTGGCCAGCAACTGGACGTGGCACGCTATGCCGAAGACGCTGgcga < 5:283378/149‑1 (MQ=255) cacGACAAGGCGGCCGACCCGATCATCCACCATGGTGATGTTCGGCGCATGCTGCTGACCATGCGCACCCTCACCGAAGCAGGTCGGGCGTTCGCCGTCTACGTTGGCCAGCAACTGGACGTGGCACGCTATGCCGAAGACGCTGgc > 1:65410/1‑147 (MQ=255) acGACAAGGCGGCCGACCCGATCATCCACCATGGTGATGTTCGGCGCATGCTGCTGACCATGCGCACCCTCACCGAAGCAGGTCGGGCGTTCGCCGTCTACGTTGGCCAccggtgtcagcagtgccaccaggcgctgggcatgctcgcg > 3:154739‑M1/1‑109 (MQ=255) acGACAAGGCGGCCGACCCGATCATCCACCATGGTGATGTTCGGCGCATGCTGCTGACCATGCGCACCCTCACCGAAGCAGGTCGGGCGTTCGCCGTCTACGTTGGCCAGCAACTGGACGTGGCACGCTATGCCGAAGACGCTGgcgag > 5:60721/1‑149 (MQ=255) aaGGCGGCCGACCCGATCATCCACCATGGTGATGTTCGGCGCATGCTGCTGACCATGCGCACCCTCACCGAAGCAGGTCGGGCGTTCGCCGTCTACGTTGGCCAGCAACTGGACGTGGCACGCTATGCCGAAGACGCTGgcgagcgcga < 2:65410/149‑1 (MQ=255) ggcCGACCCGATCATCCACCATGGTGATGTTCGGCGCATGCTGCTGACCATGCGCACCCTCACCGAAGCAGGTCGGGCGTTCGCCGTCTACGTTGGCCAGCAACTGGACGTGGCACGCTATGCCGAAGACGCTGGCGAGCGCGAGCATg > 5:329570/1‑149 (MQ=255) gcCGACCCGATCATCCACCATGGTGATGTTCGGCGCATGCTGCTGACCATGCGCACCCTCACCGAAGCAGGTCGGGCGTTCGCCGTCTACGTTGGCCAGCAACTGGACGTGGCACGCTATGCCGAAGACGCTGGCGAGCGCGAGCATGc < 2:91865/149‑1 (MQ=255) ccGATCATCCACCATGGTGATGTTCGGCGCATGCTGCTGACCATGCGCACCCTCACCGAAGCAGGTCGGGCGTTCGCCGTCTACGTTGGCCAGCAACTGGACGTGGCACGCTATGCCGAAGACGCTGGCGAGCGCGAGCATGCCCAgcg > 2:65596/1‑149 (MQ=255) atcatcCACCATGGTGATGTTCGGCGCATGCTGCTGACCATGCGCACCCTCACCGAAGCAGGTCGGGCGTTCGCCGTCTACGTTGGCCAGCAACTGGACGTGGCACGCTATGCCGAAGACGCTGgcgag > 6:349890/1‑129 (MQ=255) atcatcCACCATGGTGATGTTCGGCGCATGCTGCTGACCATGCGCACCCTCACCGAAGCAGGTCGGGCGTTCGCCGTCTACGTTGGCCAGCAACTGGACGTGGCACGCTATGCCGAAGACGCTGgcgag < 5:349890/129‑1 (MQ=255) tcatcCACCATGGTGATGTTCGGCGCATGCTGCTGACCATGCGCACCCTCACCGAAGCAGGTCGGGCGTTCGCCGTCTACGTTGGCCAGCAACTGGACGTGGCACGCTATGCCGAAGACGCTGGCGAGCGCGAGCATGCCCAGCGCCtg < 1:65596/149‑1 (MQ=255) caccaTGGTGATGTTCGGCGCATGCTGCTGACCATGCGCACCCTCACCGAAGCAGGTCGGGCGTTCGCCGTCTACGTTGGCCAGCAACTGGACGTGGCACGCTATGCCGAAGACGCTGGCGAGCGCGAGCATGCCCAGCGCCtggtgg < 6:329570/148‑1 (MQ=255) gTGATGTTCGGCGCATGCTGCTGACCATGCGCACCCTCACCGAAGCAGGTCGGGCGTTCGCCGTCTACGTTGGCCAGCAACTGGACGTGGCACGCTATGCCGAAGACGCTGGCGAGCGCGAGCATGCCCAGCGCCTGGTGGCActgct < 7:275750/148‑1 (MQ=255) tCGGCGCATGCTGCTGACCATGCGCACCCTCACCGAAGCAGGTCGGGCGTTCGCCGTCTACGTTGGCCAGCAACTGGACGTGGCACGCTATGCCGAAGACGCTGGCGAGCGCGAGCATGCCCAGCGCCTGGTGGCACTGCTGACACCgg > 7:174035/1‑149 (MQ=255) ggCGCATGCTGCTGACCATGCGCACCCTCACCGAAGCAGGTCGGGCGTTCGCCGTCTACGTTGGCCAGCAACTGGACGTGGCACGCTATGCCGAAGACGCTGGCGAGCGCGAGCATGCCCAGCGCCTGGTGGCACTGCTGACACCGGtg > 2:33469‑M2/1‑147 (MQ=255) ggCGCATGCTGCTGACCATGCGCACCCTCACCGAAGCAGGTCGGGCGTTCGCCGTCTACGTTGGCCAGCAACTGGACGTGGCACGCTATGCCGAAGACGCTGGCGAGCGCGAGCATGCCCAGCGCCTGGTGGCACTGCTGACACCGGt > 6:84904‑M2/1‑147 (MQ=255) gcgcATGCTGCTGACCATGCGCACCCTCACCGAAGCAGGTCGGGCGTTCGCCGTCTACGTTGGCCAGCAACTGGACGTGGCACGCTATGCCGAAGACGCTGGCGAGCGCGAGCATGCCCAGCGCCTGGTGGCACTGCTGACACCGGtgg > 7:149539‑M2/1‑146 (MQ=255) gcATGCTGCTGACCATGCGCACCCTCACCGAAGCAGGTCGGGCGTTCGCCGTCTACGTTGGCCAccggtgtcagcagtgccaccaggcgctgggcatgctcgcgctcgccagcgtcttcggcatagcgtgccacgtccagttgctggcc < 4:154739‑M1/149‑86 (MQ=255) gctgctGACCATGCGCACCCTCACCGAAGCAGGTCGGGCGTTCGCCGTCTACGTTGGCCAGCAACTGGACGTGGCACGCTATGCCGAAGACGCTGgcgagcgcg > 5:268410/1‑104 (MQ=255) gctgctGACCATGCGCACCCTCACCGAAGCAGGTCGGGCGTTCGCCGTCTACGTTGGCCAGCAACTGGACGTGGCACGCTATGCCGAAGACGCTGgcgagcgcg < 6:268410/104‑1 (MQ=255) ctgctgACCATGCGCACCCTCACCGAAGCAGGTCGGGCGTTCGCCGTCTACGTTGGCCAccggtgtcagcagtgccaccaggcgctgggcatgctcgcgctcgccagcgtcttcggcatagcgtgccacgtccagttgctggccaacg < 3:192696‑M1/148‑90 (MQ=255) tgctgACCATGCGCACCCTCACCGAAGCAGGTCGGGCGTTCGCCGTCTACGTTGGCCAGCAACTGGACGTGGCACGCTATGCCGAAGACGCTGGCGAGCGCGAGCAt > 5:170112/1‑107 (MQ=255) tgctgACCATGCGCACCCTCACCGAAGCAGGTCGGGCGTTCGCCGTCTACGTTGGCCAGCAACTGGACGTGGCACGCTATGCCGAAGACGCTGGCGAGCGCGAGCAt < 6:170112/107‑1 (MQ=255) aCCATGCGCACCCTCACCGAAGCAGGTCGGGCGTTCGCCGTCTACGTTGGACAGCAACTGGACGTGGCACGCTATGCCGAAGACGCTGGCGAGCGCGAGCATGCCCAGCGCCTGGTGGCACTGCTGCCAGCGGTGGGCTAGGCAttct > 8:164322/1‑148 (MQ=255) gcACCCTCACCGAAGCAGGTCGGGCGTTCGCCGTCTACGTTGGCCAGCAACTGGACGTGGCACGCTATGCCGAAGACGCTGgcgag > 2:337030/1‑86 (MQ=255) gcACCCTCACCGAAGCAGGTCGGGCGTTCGCCGTCTACGTTGGCCAGCAACTGGACGTGGCACGCTATGCCGAAGACGCTGgcgag < 1:337030/86‑1 (MQ=255) aCCCTCACCGAAGCAGGTCGGGCGTTCGCCGTCTACGTTGGCCAGCAACTGGACGTGGCCCGCTATGCCGAAGACGCTGGCGAGCGCGAGCATGCCCAGCGCCTGGTGGCACTGCTGACACCGGTGGCCAAGGCATTCTTCACTGATaa > 4:305970/1‑149 (MQ=255) ccTCACCGAAGCAGGTCGGGCGTTCGCCGTCTACGTTGGCCAGCAACTGGACGTGGCACGCTATGCCGAAGACGCTGGCGAGCGCGAGCATGCCCAGCGCCTGGTGGCACTGCTGACACCGGTGGCCAAGGCATTCTTCACTGATAACg > 5:252418/1‑149 (MQ=255) cACCGAAGCAGGTCGGGCGTTCGCCGTCTACGTTGGCCAGCAACTGGACGTGGCACGCTATGCCGAAGACGCTGGCGAGCGCGAGCATGCCCAGCGCCTGGTGGCACTGCTGACACCGGTGGCCAAGGCATTCTTCACTGATAACGGcc > 4:205091/1‑149 (MQ=255) ccGAAGCAGGTCGGGCGTTCGCCGTCTACGTTGGCCAGCAACTGGACGTGGCACGCTATGCCGAAGACGCTGGCGAGCGCGAGCATGCCCAGCGCCTGGTGGCACTGCTGACACCGGTGGCCAAGGCATTCTTCACTGATAACGGCCTg < 6:60721/149‑1 (MQ=255) cGAAGCAGGTCGGGCGTTCGCCGTCTACGTTGGCCAGCAACTGGACGTGGCACGCTATGCCGAAGACGCTGGCGAGCGCGAGCATGCCCAGCGCCTGGTGGCACTGCTGACACCGGTGGCCAAGGCATTCTTCACTGATAACGGCCTg > 2:176121/1‑148 (MQ=255) aaGCAGGTCGGGCGTTCGCCGTCTACGTTGGCCAGCAACTGGACGTGGCACGCTATGCCGAAGACGCTGGCGAGCGCGAGCATGCCCAGCGCCTGGTGGCACTGCTGACACCGGTGGCCAAGGCATTCTTCACt > 2:168615/1‑134 (MQ=255) aaGCAGGTCGGGCGTTCGCCGTCTACGTTGGCCAGCAACTGGACGTGGCACGCTATGCCGAAGACGCTGGCGAGCGCGAGCATGCCCAGCGCCTGGTGGCACTGCTGACACCGGTGGCCAAGGCATTCTTCACt < 1:168615/134‑1 (MQ=255) cAGGTCGGGCGTTCGCCGTCTACGTTGGCCAGCAACTGGACGTGGCACGCTATGCCGAAGACGCTGGCGAGCGCGAGCATGCCCAGCGCCTGGTGGCACTGCTGACACCGGTGGCCAAGGCAttc < 5:318462/125‑1 (MQ=255) cAGGTCGGGCGTTCGCCGTCTACGTTGGCCAGCAACTGGACGTGGCACGCTATGCCGAAGACGCTGGCGAGCGCGAGCATGCCCAGCGCCTGGTGGCACTGCTGACACCGGTGGCCAAGGCAttc > 6:318462/1‑125 (MQ=255) gCCGTCTACGTTGGCCAGCAACTGGACGTGGCACGCTATGCCGAAGACGCTGGCGAGCGCGAGCATGCCCAGCGCCTGGTGGCACTGCTGACACCGGTGGCCAAGGCATTCTTCACTGATAACGGCCTGGAAAGCTGCGTGCTTGGc > 8:51288/1‑147 (MQ=255) cGTTGGCCAGCAACTGGACGTGGCACGCTATGCCGAAGACGCTGGCGAGCGCGAGCATGCCCAGCGCCTGGTGGCACTGCTGACACCGGtggccaacgtagacggcgaacgcccgacctgcttcggtgagggtgcgcatggtcagcag < 3:192696‑M2/148‑60 (MQ=255) cGTTGGCCAGCAACTGGACGTGGCACGCTATGCCGAAGACGCTGGCGAGCGCGAGCATGCCCAGCGCCTGGTGGCACTGCTGACACCGGTGGCCAAGGCATTCTTCACTGATAACGGCCTGGAAAGCTGCGTGCTTGGCCAGCAGgt < 6:252418/147‑1 (MQ=255) gTTGGCCAGCAACTGGACGTGGCACGCTATGCCGAAGACGCTGGCGAGCGCGAGCATGCCCAGCGCCTGGTGGCACTGCTGACACCGGTGGCCAAGGCATTCTTCACTGATAACGGCCTGGAAAGCTGCGTGCTTGGCCAGCAGGTGTa < 3:305970/149‑1 (MQ=255) ggCCAGCAACTGGACGTGGCACGCTATGCCGAAGACGCTGGCGAGCGCGAGCATGCCCAGCGCCTGGTGGCACTGCTGACACCGGtggccaacgtagacggcgaacgcccgacctgcttcggtgagggtgcgcatggtcagcagcatgc < 4:154739‑M2/149‑65 (MQ=255) gCCAGCAACTGGACGTGGCACGCTATGCCGAAGACGCTGGCGAGCGCGAGCATGCCCAGCGCCTGGTGGCACTGCTGACACCGGTGGCCAAGGCATTCTTCACTGATAACGGCCTGGAAAGCTGCGTGCTTGGCCAGCAGGTGTATgg < 1:176121/148‑1 (MQ=255) ccAccggtgtcagcagtgccaccaggcgctgggcatgctcgcgctcgccagcgtcttcggcatagcgtgccacgtccagttgctggccaacgtagacggcgaacgcccgacctgcttcggtgagggtgcgcatggtcagcagcatgcgc > 7:149539‑M1/1‑3 (MQ=255) cAccggtgtcagcagtgccaccaggcgctgggcatgctcgcgctcgccagcgtcttcggcatagcgtgccacgtccagttgctggccaacgtagacggcgaacgcccgacctgcttcggtgagggtgcgcatggtcagcagcatgcgcc > 2:33469‑M1/1‑2 (MQ=255) cAGCAACTGGACGTGGCACGCTATGCCGAAGACGCTGGCGAGCGCGAGCATGCCCAGCGCCTGGTGGCACTGCTGACACCGGTGGCCAAGGCATTCTTCACTGATAACGGCCTGGAAAGCTGCGTGCTTGGCCAGCAGgt > 2:303884/1‑140 (MQ=255) cAGCAACTGGACGTGGCACGCTATGCCGAAGACGCTGGCGAGCGCGAGCATGCCCAGCGCCTGGTGGCACTGCTGACACCGGTGGCCAAGGCATTCTTCACTGATAACGGCCTGGAAAGCTGCGTGCTTGGCCAGCAGgt < 1:303884/140‑1 (MQ=255) cAGCAACTGGACGTGGCACGCTATGCCGAAGACGCTGGCGAGCGCGAGCATGCCCAGCGCCTGGTGGCACTGCTGACACCGGTGGCCAAGGCATTCTTCACTGATAACGGCCTGGAAAGCTGCGTGCTTGGCCAGCAGGTGTATGGCgg < 7:51288/149‑1 (MQ=255) accggtgtcagcagtgccaccaggcgctgggcatgctcgcgctcgccagcgtcttcggcatagcgtgccacgtccagttgctggccaacgtagacggcgaacgcccgacctgcttcggtgagggtgcgcatggtcagcagcatgcgcc > 6:84904‑M1/1‑1 (MQ=255) | GAGCGCCTGCAGAGCCGCGCAGCGACTGGCCCGCAGGCACACGACAAGGCGGCCGACCCGATCATCCACCATGGTGATGTTCGGCGCATGCTGCTGACCATGCGCACCCTCACCGAAGCAGGTCGGGCGTTCGCCGTCTACGTTGGCCAGCAACTGGACGTGGCACGCTATGCCGAAGACGCTGGCGAGCGCGAGCATGCCCAGCGCCTGGTGGCACTGCTGACACCGGTGGCCAAGGCATTCTTCACTGATAACGGCCTGGAAAGCTGCGTGCTTGGCCAGCAGGTGTATGGCGG > NC_002947/4031298‑4031593 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |