New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 4173137 | 33 (0.580) | 3 (0.060) | 3/246 | NT | 8.4% | coding (771/825 nt) | PP_3671 | aldo/keto reductase family oxidoreductase |
? | NC_002947 | = 4173157 | 34 (0.630) | coding (791/825 nt) | PP_3671 | aldo/keto reductase family oxidoreductase |
CGTGCTGCCCAGCCAGGTGGCGCTGAAATGGCTGCTGGACCAGGACGGCGTGGCGGCGATCCCCAAAGCCAGCAGCCGCGAAAACCAGCTGGCCAACCTGGCCGCGTTGACCGTGCCGCTGGATGACGAAGACCGCACAGCCATTGCCGGGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4172984‑4173137 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgggctgACCACGCGCTGGTCTTTCGGCAGCCCGGCAATGGCTGTGCGGTCTTCGTCATCCAGCGGCACGGTCAACGCGGCCAGGTTGGCCAGCTGGTTTTCGCGGCTGCTGGCTTTGGGGATCGCCGCCACGCCGTCCTGGTCCAGCAGCCA < NC_002947/4173157‑4173012 CGTGCTGCCCAGCCAGGTGGCGCTGAAATGGCTGCTGGACCAGGACGGCGTGGCGGCGATCCCCAAAGCCAGCAGCCGCGAAAACCAGCTGGCCAACCTGGCCGCGTTGACCGTGCCGCTGGATGACGAAGACCGCACAGCCATTGCCG < 2:148411/149‑1 TGCTGCCCAGCCAGGTGGCGCTGAAATGGCTGCTGGACCAGGACGGCGTGGCGGCGATCCCCAAAGCCAGCAGCCGCGAAAACCAGCTGGCCAACCTGGCCGCGTTGACCGTGCCGCTGGATGACGAAGACCGCACAGCCATTGCCGGG < 5:193324/149‑1 TGCCCAGCCAGGTGGCGCTGAAATGGCTGCTGGACCAGGACGGCGTGGCGGCGATCCCCAAAGCCAGCAGCCGCGAAAACCAGCTGGCCAACCTGGCCGCGTTGACCGTGCCGCTGGATGACGAAGACCGCACAGCCATTGCCGGGCTG > 4:317642/1‑149 GACCAGGACGGCGTGGCGGCGATCCCCAAAGCCAGCAGCCGCGAAAACCAGCTGGCCAACCTGGCCGCGTTGACCGTGCCGCTGGATGACGAAGACCGCACAGCCATTGCCGGGCTGACCACGCGCTGGTCTTTCGGCAGCCCGGCAAT < 4:56069/149‑1 GGCCAACCTGGCCGCGTTGACCGTGCCGCTGGATGACGAAGACCGCACAGCCATTGCCGGGCTGACCACGCGCTGGTCTTTCGGCA > 1:289/1‑86 GGCCAACCTGGCCGCGTTGACCGTGCCGCTGGATGACGAAGACCGCACAGCCATTGCCGGGCTGACCACGCGCTGGTCTTTCGGCA < 2:289/86‑1 GCTGACCACGCGCTGGTCTTTCGGCAGCCCGGCAATGGCTGTGCGGTCTTCGTCATCCAGCGGCACGGTCAACGCGGCCAGGTTGGCCAGCTGGTTTTCGCGGCTGCTGGCTTTGGGGATCGCCGCCACGCCGTCCTGGTCCAGCAGCC < 1:40675/149‑1 CTGACCACGCGCTGGTCTTTCGGCAGCCCGGCAATGGCTGTGCGGTCTTCGTCATCCAGCGGCACGGTCAACGCGGCCAGGTTGGCCAGCTGGTTTTCGCGGCTGCTGGCTTTGGGGATCGCCGCCACGCCGTCCTGGTCCAGCAGCCA > 1:274026/1‑149 CGTGCTGCCCAGCCAGGTGGCGCTGAAATGGCTGCTGGACCAGGACGGCGTGGCGGCGATCCCCAAAGCCAGCAGCCGCGAAAACCAGCTGGCCAACCTGGCCGCGTTGACCGTGCCGCTGGATGACGAAGACCGCACAGCCATTGCCGGGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4172984‑4173137 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgggctgACCACGCGCTGGTCTTTCGGCAGCCCGGCAATGGCTGTGCGGTCTTCGTCATCCAGCGGCACGGTCAACGCGGCCAGGTTGGCCAGCTGGTTTTCGCGGCTGCTGGCTTTGGGGATCGCCGCCACGCCGTCCTGGTCCAGCAGCCA < NC_002947/4173157‑4173012 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |