New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 417313733 (0.580)3 (0.060) 3/246 NT 8.4% coding (771/825 nt) PP_3671 aldo/keto reductase family oxidoreductase
?NC_002947 = 4173157 34 (0.630)coding (791/825 nt) PP_3671 aldo/keto reductase family oxidoreductase

CGTGCTGCCCAGCCAGGTGGCGCTGAAATGGCTGCTGGACCAGGACGGCGTGGCGGCGATCCCCAAAGCCAGCAGCCGCGAAAACCAGCTGGCCAACCTGGCCGCGTTGACCGTGCCGCTGGATGACGAAGACCGCACAGCCATTGCCGGGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/4172984‑4173137
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgggctgACCACGCGCTGGTCTTTCGGCAGCCCGGCAATGGCTGTGCGGTCTTCGTCATCCAGCGGCACGGTCAACGCGGCCAGGTTGGCCAGCTGGTTTTCGCGGCTGCTGGCTTTGGGGATCGCCGCCACGCCGTCCTGGTCCAGCAGCCA  <  NC_002947/4173157‑4173012
                                                                                                                                                                                                                                                                                                            
CGTGCTGCCCAGCCAGGTGGCGCTGAAATGGCTGCTGGACCAGGACGGCGTGGCGGCGATCCCCAAAGCCAGCAGCCGCGAAAACCAGCTGGCCAACCTGGCCGCGTTGACCGTGCCGCTGGATGACGAAGACCGCACAGCCATTGCCG                                                                                                                                                         <  2:148411/149‑1
  TGCTGCCCAGCCAGGTGGCGCTGAAATGGCTGCTGGACCAGGACGGCGTGGCGGCGATCCCCAAAGCCAGCAGCCGCGAAAACCAGCTGGCCAACCTGGCCGCGTTGACCGTGCCGCTGGATGACGAAGACCGCACAGCCATTGCCGGG                                                                                                                                                       <  5:193324/149‑1
     TGCCCAGCCAGGTGGCGCTGAAATGGCTGCTGGACCAGGACGGCGTGGCGGCGATCCCCAAAGCCAGCAGCCGCGAAAACCAGCTGGCCAACCTGGCCGCGTTGACCGTGCCGCTGGATGACGAAGACCGCACAGCCATTGCCGGGCTG                                                                                                                                                    >  4:317642/1‑149
                                     GACCAGGACGGCGTGGCGGCGATCCCCAAAGCCAGCAGCCGCGAAAACCAGCTGGCCAACCTGGCCGCGTTGACCGTGCCGCTGGATGACGAAGACCGCACAGCCATTGCCGGGCTGACCACGCGCTGGTCTTTCGGCAGCCCGGCAAT                                                                                                                    <  4:56069/149‑1
                                                                                          GGCCAACCTGGCCGCGTTGACCGTGCCGCTGGATGACGAAGACCGCACAGCCATTGCCGGGCTGACCACGCGCTGGTCTTTCGGCA                                                                                                                              >  1:289/1‑86
                                                                                          GGCCAACCTGGCCGCGTTGACCGTGCCGCTGGATGACGAAGACCGCACAGCCATTGCCGGGCTGACCACGCGCTGGTCTTTCGGCA                                                                                                                              <  2:289/86‑1
                                                                                                                                                      GCTGACCACGCGCTGGTCTTTCGGCAGCCCGGCAATGGCTGTGCGGTCTTCGTCATCCAGCGGCACGGTCAACGCGGCCAGGTTGGCCAGCTGGTTTTCGCGGCTGCTGGCTTTGGGGATCGCCGCCACGCCGTCCTGGTCCAGCAGCC   <  1:40675/149‑1
                                                                                                                                                       CTGACCACGCGCTGGTCTTTCGGCAGCCCGGCAATGGCTGTGCGGTCTTCGTCATCCAGCGGCACGGTCAACGCGGCCAGGTTGGCCAGCTGGTTTTCGCGGCTGCTGGCTTTGGGGATCGCCGCCACGCCGTCCTGGTCCAGCAGCCA  >  1:274026/1‑149
                                                                                                                                                                                                                                                                                                            
CGTGCTGCCCAGCCAGGTGGCGCTGAAATGGCTGCTGGACCAGGACGGCGTGGCGGCGATCCCCAAAGCCAGCAGCCGCGAAAACCAGCTGGCCAACCTGGCCGCGTTGACCGTGCCGCTGGATGACGAAGACCGCACAGCCATTGCCGGGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/4172984‑4173137
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgggctgACCACGCGCTGGTCTTTCGGCAGCCCGGCAATGGCTGTGCGGTCTTCGTCATCCAGCGGCACGGTCAACGCGGCCAGGTTGGCCAGCTGGTTTTCGCGGCTGCTGGCTTTGGGGATCGCCGCCACGCCGTCCTGGTCCAGCAGCCA  <  NC_002947/4173157‑4173012

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.