New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 4173137	33 (0.580)	3 (0.060)	3/246	NT	8.4%	coding (771/825 nt)	PP_3671	aldo/keto reductase family oxidoreductase
	?	NC_002947	= 4173157	34 (0.630)					coding (791/825 nt)	PP_3671	aldo/keto reductase family oxidoreductase

ATGGCTGCTGGACCAGGACGGCGTGGCGGCGATCCCCAAAGCCAGCAGCCGCGAAAACCAGCTGGCCAACCTGGCCGCGTTGACCGTGCCGCTGGATGACGAAGACCGCACAGCCATTGCCGGGCTGCCGAAAGACCAGCGCGTGGTCAGCCCGCCGTTTGCCCCGGACTGGAACAGCTGAGGCCGCCGCGCAAGTCATTGTTCTTGGGTGATGACCTGCTTCAACCGCTCGCTCGCCGGTGCCGGCCGCCCGTAAAAGTAGCCCTGGAAGTGCGAACAGCCTTCCGCCGCGAG  >  NC_002947/4173011‑4173304                                                                                                                                                   |                                                                                                                                                    aTGGCTGCTGGACCAGGACGGCGTGGCGGCGATCCCCAAAGCCAGCAGCCGCGAAAACCTGCTGGCCAACCTGGCCGCGTTGACCGTGCCGCTGGATGACGAAGACCGCACAGCCATTGCCGGGCTGCCGAAAGACCAGCGCGTGGt                                                                                                                                                     >  1:57513/1‑147 (MQ=255)  tGGCTGCTGGACCAGGACGGCGTGGCGGCGATCCCCAAAGCCAGCAGCCGCGAAAACCAGCTGGCCAACCTGGCCGCGTTGACCGTGCCGCTGGATGACGAAGACCGCACAGCCATTGCCGGGCTGCCGAAAGACCAGCGCGTGGTcag                                                                                                                                                  >  1:274026‑M2/1‑146 (MQ=255)   ggCTGCTGGACCAGGACGGCGTGGCGGCGATCCCCAAAGCCAGCAGCCGCGAAAACCAGCTGGCCAACCTGGCCGCGTTGACCGTGCCGCTGGATGACGAAGACCGCACAGCCATTGCCGGGCTGCCGAAAGACCAGCGCGTGGTcagc                                                                                                                                                 <  1:40675‑M2/149‑5 (MQ=255)           gACCAGGACGGCGTGGCGGCGATCCCCAAAGCCAGCAGCCGCGAAAACCTGCTGGCCAACCTGGCCGCGTTGACCGTGCCGCTGGATGACGAAGACCGCACAGCCATTGCCGGGCTGCCGAAAGACCAGCGCGTGGTCAGCCCGCCGtt                                                                                                                                         <  2:57513/149‑1 (MQ=255)            aCCAGGACGGCGTGGCGGCGATCCCCAAAGCCAGCAGCCGCGAAAACCAGCTGGCCAACCTGGCCGCGTTGACCGTGCCGCTGGATGACGAAGACCGCACAGCCATTGCCGGGCTGCCGAAAGACCAGCGCGTGGTCAGCCCGCCGttt                                                                                                                                        <  6:93316/149‑1 (MQ=255)             ccAGGACGGCGTGGCGGCGATCCCCAAAGCCAGCAGCCGCGAAAACCAGCTGGCCAACCTGGCCGCGTTGACCGTGCCGCTGGATGACGAAGACCGCACAGCCATTGCCGGGCTGCCGAAAGACCAGCGCGTGGTCAGCCCGCCGTTTg                                                                                                                                       >  1:184341/1‑149 (MQ=255)                     gCGTGGCGGCGATCCCCAAAGCCAGCAGCCGCGAAAACCAGCTGGCCAACCTGGCCGCGTTGACCGTGCCGCTGGATGACGAAGACCGCACAGCCATTGCCGGGCTGCCGAAAGACCAGCGCGTGGTCAGCCCGCCGTTTGCCCCGGAc                                                                                                                               >  2:225687/1‑149 (MQ=255)                      cGTGGCGGCGATCCCCAAAGCCAGCAGCCGCGAAAACCAGCTGGCCAACCTGGCCGCGTTGACCGTGCCGCTGGATGACGAAGACCGCACAGCCATTGCCGGGCTGCCGAAAGACCAGCGCGTGGTCAGCCCGCCGTTTGCCCCGGACt                                                                                                                              <  3:317642/149‑1 (MQ=255)                            ggcgATCCCCAAAGCCAGCAGCCGCGAAAACCAGCTGGCCAACCTGGCCGCGTTGACCGTGCCGCTGGATGACGAAGACCGCACAGCCATTGCCGGGCTGCCGAAAGACCAGCGCGTGGTCAGCCCGCCGTTTGCCCCGGACTGGAACa                                                                                                                        <  2:184341/149‑1 (MQ=255)                               gATCCCCAAAGCCAGCAGCCGCGAAAACCAGCTGGCCAACCTGGCCGCGTTGACCGTGCCGCTGGATGACGAAGACCGCACAGCCATTGCCGGGCTGCCGAAAGACCAGCGCGTGGTCAGCCCGCCGTTTGCCCCGGACTGGAACAGCt                                                                                                                     >  4:75636/1‑149 (MQ=255)                                     cAAAGCCAGCAGCCGCGAAAACCAGCTGGACAACCTGGCCGCGTTGACCGTGCCGCTGGATGACGAAGACCGCACAGCCATTGCCGGGCTGCCGAAAGACCAGCGCGTGGTCAGCCCGCCGTTTGCCCCGGACTGGAACAGCTGAGgcc                                                                                                               >  8:49556/1‑149 (MQ=255)                                                gcCGCGAAAACCAGCTGGCCAACCTGGCCGCGTTGACCTTGCCGCTGGATGACGAAGACCGCACAGCCATTGCCGGGCTGCCGAAAGACCAGCGCGTGGTCAGCCCGCCGTTTGCCCCGGACTGGAACAGCTGa                                                                                                                   <  8:124540/134‑1 (MQ=255)                                                gcCGCGAAAACCAGCTGGCCAACCTGGCCGCGTTGACCGTGCCGCTGGATGACGAAGACCGCACAGCCATTGCCGGGCTGCCGAAAGACCAGCGCGTGGTCAGCCCGCCGTTTGCCCCGGACTGGAACAGCTGa                                                                                                                   >  7:124540/1‑134 (MQ=255)                                                            aGCTGGCCAACCTGGCCGCGTTGACCGTGCCGCTGGATGACGAAGACCGCACAGCCATTGCCGGGCTGCCGAAAGACCAGCGCGTGGTCAGCCCGCCGTTTGCCCCGGACTGGAACAGCTGAGGCCGCCGCGCAAGTCATTGTTCTTgg                                                                                        <  7:49556/149‑1 (MQ=255)                                                            aGCTGGCCAACCTGGCCGCGTTGACCGTGCCGCTGGATGACGAAGACCGCACAGCCATTGCCGGGCTGCCGAAAGACCAGCGCGTGGTCAGCCCGCCGTTTGCCCCGGACTGGAACAGCTGAGGCCGCCGCGCAAGTCATTGTTCTTgg                                                                                        <  3:16762/149‑1 (MQ=255)                                                            aGCTGGCCAACCTGGCCGCGTTGACCGTGCCGCTGGATGACGAAGACCGCACAGCCATTGCCGGGCTGCCGAAAGACCAGCGCGTGGTCAGCCCGCCGTTTGCCCCGGACTGGAACAGCTGAGGCCGCCGCGCAAGTCATTGTTCTTgg                                                                                        <  3:75636/149‑1 (MQ=255)                                                                         ggCCGCGTTGACCGTGCCGCTGGATGACGAAGACCGCACAGCCATTGCCGGGCTGCCGAAAGACCAGCGCGTGGTCAGCCCGCCGTTTGCCCCGGACTGGAACAGCTGAGGCCGCCGCGCAAGTCATTGTTCTTGGGTGATGACCTGCt                                                                           >  4:200084/1‑149 (MQ=255)                                                                             gcgTTGACCGTGCCGCTTGATGACGAAGACCGCACAGCCATTGCCGGGCTGCCGAAAGACCAGCGCGTGGTCAGCCCGCCGTTTGCCCCGGACTGGAACAGCTGAGGCCGCCGCGCAAGTCATTGTTCTTGGGTGATGACCTGCTTCaa                                                                       <  1:71444/149‑1 (MQ=255)                                                                             gcgTTGACCGTGCCGCTGGATGACGAAGACCGCACAGCCATTGCCGGGCTGCCGAAAGACCAGCGCGTGGTCAGCCCGCCGTTTGCCCCGGACTGGAACAGCTGAGGCCGCCGCGCAAGTCATTGTTCTTGGGTGATGACCTGCTTCaa                                                                       >  6:24096/1‑149 (MQ=255)                                                                               gTTGACCGTGCCGCTGGATGACGAAGACCGCACAGCCATTGCCGGGCTGCCGAAAGACCAGCGCGTGGTCAGCCCGCCGTTTGCCCCGGACTGGAACAGCTGAGGCCGCCGCGCAAGTCATTGTTCTTGGGTGATGACCTGCTTCAAcc                                                                     <  2:40675/149‑1 (MQ=255)                                                                               gTTGACCGTGCCGCTGGATGACGAAGACCGCACAGCCATTGCCGGGCTGCCGAAAGACCAGCGCGTGGTCAGCCCGCCGTTTGCCCCGGACTGGAACAGCTGAGGCCGCCGCGCAAGTCATTGTTCTTGGGTGATGACCTGCTTCAAcc                                                                     <  4:282838/149‑1 (MQ=255)                                                                                    ccGTGCCGCTGGATGACGAAGACCGCACAGCCATTGCCGGGCTGCCGAAAGACCAGCGCGTGGTCAGCCCGCCGTTTGCCCCGGACTGGAACAGCTGAGGCCGCCGCGCAAGTCTTTGTTCTTGGGTGATGACCTGCTTCAACcgctc                                                                 <  1:225687/148‑1 (MQ=255)                                                                                     cGTGCCGCTGGATGACGAAGACCGCACAGCCATTGCCGGGCTGCCGAAAGACCAGCGCGTGGTCAGCCCGCCGTTTGCCCCGGACTGGAACAGCTGAGGCCGCCGCGCAAGTCATTGTTCTTGGGTGATGACCTGCTTCAACcgctcgc                                                               >  2:21004/1‑149 (MQ=255)                                                                                      gTGCCGCTGGATGACGAAGACCGCACAGCCATTGCCGGGCTGCCGAAAGACCAGCGCGTGGTCAGCCCGCCGTTTGCCCCGGACTGGAACAGCTGAGGCCGCCGCGCAAGTCATTGTTCTTGGGTGATGACCTGCTTc                                                                         >  1:335673/1‑138 (MQ=255)                                                                                      gTGCCGCTGGATGACGAAGACCGCACAGCCATTGCCGGGCTGCCGAAAGACCAGCGCGTGGTCAGCCCGCCGTTTGCCCCGGACTGGAACAGCTGAGGCCGCCGCGCAAGTCATTGTTCTTGGGTGATGACCTGCTTc                                                                         <  2:335673/138‑1 (MQ=255)                                                                                                 tGACGAAGACCGCACAGCCATTGCCGGGCTGCCGAAAGACCAGCGCGTGGTCAGCCCGCCGTTTGCCCCGGACTGGAACAGCTGAGGCCGCCGCGCAAGTCATTGTTCTTGGGTGATGACCTGCTTCAACCGCTCGCTCGCCGGTgccg                                                   <  3:200084/149‑1 (MQ=255)                                                                                                                aGCCATTGCCGGGCTGCCGAAAGACCAGCGCGTGGTCAGCCCGCCGTTTGCCCCGGACTGGAACAGCTGAGGCCGCCGCGCAAGTCATTGTTCTTGGGTGATGACCTGCTTCAACCGCTCGCTCGCCGGTGCCGGCCGCCCGTaaaa                                      <  5:175449/147‑1 (MQ=255)                                                                                                                aGCCATTGCCGGGCTGCCGAAAGACCAGCGCGTGGTCAGCCCGCCGTTTGCCCCGGACTGGAACAGCTGAGGCCGCCGCGCAAGTCATTGTTCTTGGGTGATGACCTGCTTCAACCGCTCGCTCGCCGGTGCCGGCCGCCCGTaaaa                                      >  6:175449/1‑147 (MQ=255)                                                                                                                 gCCATTGCCGGGCTGCCGAAAGACCAGCGCGTGGTCAGCCCGCCGTTTGCCCCGGACTGGAACAGCTGAGGCCGCCGCGCAAGTCATTGTTCTTGGGTGATGACCTGCTTCAACCGCTCGCTCGCCGGTGCCGGCCGCCCGTAAAAGTa                                   <  2:47846/149‑1 (MQ=255)                                                                                                                  ccATTGCCGGGCTGCCGAAAGACCAGCGCGTGGTCAGCCCGCCGTTTGCCCCGGACTGGAACAGCTGAGGCCGCCGCGCAAGTCATTGTTCTTGGGTGATGACCTGCTTCAACCGCTCGCTCGCCGGTGCCGGCCGCCCGTAAAAGTAg                                  >  6:356177/1‑149 (MQ=255)                                                                                                                    aTTGCCGGGCTGCCGAAAGACCAGCGCGTGGTcagcccggcaatggctgtgcggtcttcgtcatccagcggcacggtcaacgcggccaggttggccagctggttttcgcggctgctggctttggggatcgccgccacgccgtcctggtc                                <  4:56069‑M2/149‑118 (MQ=255)                                                                                                                       gCCGGGCTGCCGAAAGACCAGCGCGTGGTCAGCCCGCCGTTTGCCCCGGACTGGAACAGCTGAGGCCGCCGCGCAAGTCATTGTTCTTGGGTGATGACCTGCTTCAACCGCTCGCTCGCCGGTGCCGGCCGCCCGTAAAAGTAGCCCt                              <  5:24096/148‑1 (MQ=255)                                                                                                                          gggCTGCCGAAAGACCAGCGCGTGGTCAGCCCGCCGTTTGCCCCGGACTGGAACAGCTGAGGCCGCCGCGCAAGTCATTGTTCTTGGGTGATGACCTGCTTCAACCGCTCGCTCGCCGGTGCCGGCCGCCCGTAAAAGTAGCCCTgg                            >  8:287661/1‑147 (MQ=255)                                                                                                                              tGCCGAAAGACCAGCGCGTGGTcagcccggcaatggctgtgcggtcttcgtcatccagcggcacggtcaacgcggccaggttggcc                                                                                     <  2:289‑M2/86‑65 (MQ=255)                                                                                                                              tGCCGAAAGACCAGCGCGTGGTcagcccggcaatggctgtgcggtcttcgtcatccagcggcacggtcaacgcggccaggttggcc                                                                                     >  1:289‑M2/1‑22 (MQ=255)                                                                                                                              tGCCGAAAGACCAGCGCGTGGTCAGCCCGCCGTTTGCCCCGGACTGGAACAGCTGAGGCCGCCGCGCAAg                                                                                                     <  7:79081/70‑1 (MQ=255)                                                                                                                              tGCCGAAAGACCAGCGCGTGGTCAGCCCGCCGTTTGCCCCGGACTGGAACAGCTGAGGCCGCCGCGCAAg                                                                                                     >  8:79081/1‑70 (MQ=255)                                                                                                                                  gAAAGACCAGCGCGTGGTCAGCCCGCCGTTTGCCCCGGACTGGAACAGCTGAGGCCGCCGCGCAAGTCATTGTTCTTGGGTGATGACCTGCTTCAACCGCTCGCTCGCCGGTGCCGGCCGCCCGTAAAAGTAGCCCTGGAAGTGCGaa                   >  1:44326/1‑148 (MQ=255)                                                                                                                                  gAAAGACCAGCGCGTGGTCAGCCCGCCGTTTGCCCCGGACTGGAACAGCTGAGGCCGCCGCGCAAGTCATTGTTCTTGGGTGATGACCTGCTTCAACCGCTCGCTCGCCGGTGCCGGCCGCCCGTAAAAGTAGCCCTGGAAGTGCGaa                   >  1:335573/1‑148 (MQ=255)                                                                                                                                         cAGCGCGTGGTCAGCCCGCCGTTTGCCCCGGACTGGAACAGCTGAGGCCGCCGCGCAAGTCATTGTTCTTg                                                                                         >  7:266412/1‑71 (MQ=255)                                                                                                                                         cAGCGCGTGGTCAGCCCGCCGTTTGCCCCGGACTGGAACAGCTGAGGCCGCCGCGCAAGTCATTGTTCTTg                                                                                         <  8:266412/71‑1 (MQ=255)                                                                                                                                                tGGTCAGCCCGCCGTTTGCCCCGGACTGGAACAGCTGAGGCCGCCGCGCAAGTCATTGTTCTTGGGTGATGACCTGCTTCAACCGCTCGCTCGCCGCTGCCGGCCGCCCGTAAAAGTAGCCCTGGAAGTGCGAACAGCCTTCcgccgc     >  6:309228/1‑148 (MQ=255)                                                                                                                                                  gTCAGCCCGCCGTTTGCCCCGGACTGGAACAGCTGAGGCCGCCGCGCAAGTCATTGTTCTTGGGTGATGACCTGCTTCAACCGCTCGCTCGCCGGTGCCGGCCGCCCGTAAAAGTAGCCCTGGAAGTGCGAACAGCCTTCCGCCGCGAg  >  4:65627/1‑149 (MQ=255)                                                                                                                                                   |                                                                                                                                                    ATGGCTGCTGGACCAGGACGGCGTGGCGGCGATCCCCAAAGCCAGCAGCCGCGAAAACCAGCTGGCCAACCTGGCCGCGTTGACCGTGCCGCTGGATGACGAAGACCGCACAGCCATTGCCGGGCTGCCGAAAGACCAGCGCGTGGTCAGCCCGCCGTTTGCCCCGGACTGGAACAGCTGAGGCCGCCGCGCAAGTCATTGTTCTTGGGTGATGACCTGCTTCAACCGCTCGCTCGCCGGTGCCGGCCGCCCGTAAAAGTAGCCCTGGAAGTGCGAACAGCCTTCCGCCGCGAG  >  NC_002947/4173011‑4173304

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.