New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 4173137	33 (0.580)	3 (0.060)	3/246	NT	8.4%	coding (771/825 nt)	PP_3671	aldo/keto reductase family oxidoreductase
	?	NC_002947	= 4173157	34 (0.630)					coding (791/825 nt)	PP_3671	aldo/keto reductase family oxidoreductase

TGCCCAGCCAGGTGGCGCTGAAATGGCTGCTGGACCAGGACGGCGTGGCGGCGATCCCCAAAGCCAGCAGCCGCGAAAACCAGCTGGCCAACCTGGCCGCGTTGACCGTGCCGCTGGATGACGAAGACCGCACAGCCATTGCCGGGCTGCCGAAAGACCAGCGCGTGGTCAGCCCGCCGTTTGCCCCGGACTGGAACAGCTGAGGCCGCCGCGCAAGTCATTGTTCTTGGGTGATGACCTGCTTCAACCGCTCGCTCGCCGGTGCCGGCCGCCCGTAAAAGTAGCCCTGGAAGTG  >  NC_002947/4172989‑4173283                                                                                                                                                     |                                                                                                                                                   tgcCCAGCCAGGTGGCGCTGAAATGGCTGCTGGACCAGGACGGCGTGGCGGCGATCCCCAAAGCCAGCAGCCGCGAAAACCAGCTGGCCAACCTGGCCGCGTTGACCGTGCCGCTGGATGACGAAGACCGCACAGCCATTGCCGGGCTG                                                                                                                                                    >  4:317642‑M1/1‑149 (MQ=255)     cagccagGTGGCGCTGAAATGGCTGCTGGACCAGGACGGCGTGGCGGCGATCCCCAAAGCCAGCAGCCGCGAAAACCAGCTGGCCAACCTGGCCGCGTTGACCGTGCCGCTGGATGACGAAGACCGCACAGCCATTGCCGGGCTGCCGa                                                                                                                                                <  2:28049/149‑1 (MQ=255)                    gAAATGGCTGCTGGACCAGGACGGCGTGGCGGCGATCCCCAAAGCCAGCAGCCGCGAAAACCAGCTGGCCAACCTGGCCGCGTTGACCGTGCCGCTGGATGACGAAGACCGCACAGCCATTGCCGGGCTGCCGAAAGACCAGCGCGTgg                                                                                                                                 >  5:93316/1‑149 (MQ=255)                       aTGGCTGCTGGACCAGGACGGCGTGGCGGCGATCCCCAAAGCCAGCAGCCGCGAAAACCTGCTGGCCAACCTGGCCGCGTTGACCGTGCCGCTGGATGACGAAGACCGCACAGCCATTGCCGGGCTGCCGAAAGACCAGCGCGTGGt                                                                                                                                >  1:57513/1‑147 (MQ=255)                        tGGCTGCTGGACCAGGACGGCGTGGCGGCGATCCCCAAAGCCAGCAGCCGCGAAAACCAGCTGGCCAACCTGGCCGCGTTGACCGTGCCGCTGGATGACGAAGACCGCACAGCCATTGCCGGGCTGCCGAAAGACCAGCGCGTGGTcag                                                                                                                             >  1:274026‑M2/1‑146 (MQ=255)                         ggCTGCTGGACCAGGACGGCGTGGCGGCGATCCCCAAAGCCAGCAGCCGCGAAAACCAGCTGGCCAACCTGGCCGCGTTGACCGTGCCGCTGGATGACGAAGACCGCACAGCCATTGCCGGGCTGCCGAAAGACCAGCGCGTGGTcagc                                                                                                                            <  1:40675‑M2/149‑5 (MQ=255)                            tgctgGACCAGGACGGCGTGGCGGCGATCCCCAAAGCCAGCAGCCGCGAAAACCAGCTGGCCAACCTGGCCGCGTTGACCGTGCCGCTGGATGACGAAGACCGCACAGCCATTGCCGGGCTGCCGaaa                                                                                                                                              >  2:276957/1‑128 (MQ=255)                            tgctgGACCAGGACGGCGTGGCGGCGATCCCCAAAGCCAGCAGCCGCGAAAACCAGCTGGCCAACCTGGCCGCGTTGACCGTGCCGCTGGATGACGAAGACCGCACAGCCATTGCCGGGCTGCCGaaa                                                                                                                                              <  1:276957/128‑1 (MQ=255)                                 gACCAGGACGGCGTGGCGGCGATCCCCAAAGCCAGCAGCCGCGAAAACCTGCTGGCCAACCTGGCCGCGTTGACCGTGCCGCTGGATGACGAAGACCGCACAGCCATTGCCGGGCTGCCGAAAGACCAGCGCGTGGTCAGCCCGCCGtt                                                                                                                    <  2:57513/149‑1 (MQ=255)                                 gACCAGGACGGCGTGGCGGCGATCCCCAAAGCCAGCAGCCGCGAAAACCAGCTGGCCAACCTGGCCGCGTTGACCGTGCCGCTGGATGACGAAGACCGCACAGCCATTGCCGGGCTGaccacgcgctggtctttcggcagcccggcaat                                                                                                                    <  4:56069‑M1/149‑33 (MQ=255)                                  aCCAGGACGGCGTGGCGGCGATCCCCAAAGCCAGCAGCCGCGAAAACCAGCTGGCCAACCTGGCCGCGTTGACCGTGCCGCTGGATGACGAAGACCGCACAGCCATTGCCGGGCTGCCGAAAGACCAGCGCGTGGTCAGCCCGCCGttt                                                                                                                   <  6:93316/149‑1 (MQ=255)                                   ccAGGACGGCGTGGCGGCGATCCCCAAAGCCAGCAGCCGCGAAAACCAGCTGGCCAACCTGGCCGCGTTGACCGTGCCGCTGGATGACGAAGACCGCACAGCCATTGCCGGGCTGCCGAAAGACCAGCGCGTGGTCAGCCCGCCGTTTg                                                                                                                  >  1:184341/1‑149 (MQ=255)                                           gCGTGGCGGCGATCCCCAAAGCCAGCAGCCGCGAAAACCAGCTGGCCAACCTGGCCGCGTTGACCGTGCCGCTGGATGACGAAGACCGCACAGCCATTGCCGGGCTGCCGAAAGACCAGCGCGTGGTCAGCCCGCCGTTTGCCCCGGAc                                                                                                          >  2:225687/1‑149 (MQ=255)                                            cGTGGCGGCGATCCCCAAAGCCAGCAGCCGCGAAAACCAGCTGGCCAACCTGGCCGCGTTGACCGTGCCGCTGGATGACGAAGACCGCACAGCCATTGCCGGGCTGCCGAAAGACCAGCGCGTGGTCAGCCCGCCGTTTGCCCCGGACt                                                                                                         <  3:317642/149‑1 (MQ=255)                                                  ggcgATCCCCAAAGCCAGCAGCCGCGAAAACCAGCTGGCCAACCTGGCCGCGTTGACCGTGCCGCTGGATGACGAAGACCGCACAGCCATTGCCGGGCTGCCGAAAGACCAGCGCGTGGTCAGCCCGCCGTTTGCCCCGGACTGGAACa                                                                                                   <  2:184341/149‑1 (MQ=255)                                                     gATCCCCAAAGCCAGCAGCCGCGAAAACCAGCTGGCCAACCTGGCCGCGTTGACCGTGCCGCTGGATGACGAAGACCGCACAGCCATTGCCGGGCTGCCGAAAGACCAGCGCGTGGTCAGCCCGCCGTTTGCCCCGGACTGGAACAGCt                                                                                                >  4:75636/1‑149 (MQ=255)                                                           cAAAGCCAGCAGCCGCGAAAACCAGCTGGACAACCTGGCCGCGTTGACCGTGCCGCTGGATGACGAAGACCGCACAGCCATTGCCGGGCTGCCGAAAGACCAGCGCGTGGTCAGCCCGCCGTTTGCCCCGGACTGGAACAGCTGAGgcc                                                                                          >  8:49556/1‑149 (MQ=255)                                                                      gcCGCGAAAACCAGCTGGCCAACCTGGCCGCGTTGACCTTGCCGCTGGATGACGAAGACCGCACAGCCATTGCCGGGCTGCCGAAAGACCAGCGCGTGGTCAGCCCGCCGTTTGCCCCGGACTGGAACAGCTGa                                                                                              <  8:124540/134‑1 (MQ=255)                                                                      gcCGCGAAAACCAGCTGGCCAACCTGGCCGCGTTGACCGTGCCGCTGGATGACGAAGACCGCACAGCCATTGCCGGGCTGCCGAAAGACCAGCGCGTGGTCAGCCCGCCGTTTGCCCCGGACTGGAACAGCTGa                                                                                              >  7:124540/1‑134 (MQ=255)                                                                                  aGCTGGCCAACCTGGCCGCGTTGACCGTGCCGCTGGATGACGAAGACCGCACAGCCATTGCCGGGCTGCCGAAAGACCAGCGCGTGGTCAGCCCGCCGTTTGCCCCGGACTGGAACAGCTGAGGCCGCCGCGCAAGTCATTGTTCTTgg                                                                   <  3:16762/149‑1 (MQ=255)                                                                                  aGCTGGCCAACCTGGCCGCGTTGACCGTGCCGCTGGATGACGAAGACCGCACAGCCATTGCCGGGCTGCCGAAAGACCAGCGCGTGGTCAGCCCGCCGTTTGCCCCGGACTGGAACAGCTGAGGCCGCCGCGCAAGTCATTGTTCTTgg                                                                   <  3:75636/149‑1 (MQ=255)                                                                                  aGCTGGCCAACCTGGCCGCGTTGACCGTGCCGCTGGATGACGAAGACCGCACAGCCATTGCCGGGCTGCCGAAAGACCAGCGCGTGGTCAGCCCGCCGTTTGCCCCGGACTGGAACAGCTGAGGCCGCCGCGCAAGTCATTGTTCTTgg                                                                   <  7:49556/149‑1 (MQ=255)                                                                                      ggCCAACCTGGCCGCGTTGACCGTGCCGCTGGATGACGAAGACCGCACAGCCATTGCCGGGCTGaccacgcgctggtctttcggca                                                                                                                              <  2:289‑M1/86‑23 (MQ=255)                                                                                      ggCCAACCTGGCCGCGTTGACCGTGCCGCTGGATGACGAAGACCGCACAGCCATTGCCGGGCTGaccacgcgctggtctttcggca                                                                                                                              >  1:289‑M1/1‑64 (MQ=255)                                                                                               ggCCGCGTTGACCGTGCCGCTGGATGACGAAGACCGCACAGCCATTGCCGGGCTGCCGAAAGACCAGCGCGTGGTCAGCCCGCCGTTTGCCCCGGACTGGAACAGCTGAGGCCGCCGCGCAAGTCATTGTTCTTGGGTGATGACCTGCt                                                      >  4:200084/1‑149 (MQ=255)                                                                                                   gcgTTGACCGTGCCGCTTGATGACGAAGACCGCACAGCCATTGCCGGGCTGCCGAAAGACCAGCGCGTGGTCAGCCCGCCGTTTGCCCCGGACTGGAACAGCTGAGGCCGCCGCGCAAGTCATTGTTCTTGGGTGATGACCTGCTTCaa                                                  <  1:71444/149‑1 (MQ=255)                                                                                                   gcgTTGACCGTGCCGCTGGATGACGAAGACCGCACAGCCATTGCCGGGCTGCCGAAAGACCAGCGCGTGGTCAGCCCGCCGTTTGCCCCGGACTGGAACAGCTGAGGCCGCCGCGCAAGTCATTGTTCTTGGGTGATGACCTGCTTCaa                                                  >  6:24096/1‑149 (MQ=255)                                                                                                     gTTGACCGTGCCGCTGGATGACGAAGACCGCACAGCCATTGCCGGGCTGCCGAAAGACCAGCGCGTGGTCAGCCCGCCGTTTGCCCCGGACTGGAACAGCTGAGGCCGCCGCGCAAGTCATTGTTCTTGGGTGATGACCTGCTTCAAcc                                                <  2:40675/149‑1 (MQ=255)                                                                                                     gTTGACCGTGCCGCTGGATGACGAAGACCGCACAGCCATTGCCGGGCTGCCGAAAGACCAGCGCGTGGTCAGCCCGCCGTTTGCCCCGGACTGGAACAGCTGAGGCCGCCGCGCAAGTCATTGTTCTTGGGTGATGACCTGCTTCAAcc                                                <  4:282838/149‑1 (MQ=255)                                                                                                          ccGTGCCGCTGGATGACGAAGACCGCACAGCCATTGCCGGGCTGCCGAAAGACCAGCGCGTGGTCAGCCCGCCGTTTGCCCCGGACTGGAACAGCTGAGGCCGCCGCGCAAGTCTTTGTTCTTGGGTGATGACCTGCTTCAACcgctc                                            <  1:225687/148‑1 (MQ=255)                                                                                                           cGTGCCGCTGGATGACGAAGACCGCACAGCCATTGCCGGGCTGCCGAAAGACCAGCGCGTGGTCAGCCCGCCGTTTGCCCCGGACTGGAACAGCTGAGGCCGCCGCGCAAGTCATTGTTCTTGGGTGATGACCTGCTTCAACcgctcgc                                          >  2:21004/1‑149 (MQ=255)                                                                                                            gTGCCGCTGGATGACGAAGACCGCACAGCCATTGCCGGGCTGCCGAAAGACCAGCGCGTGGTCAGCCCGCCGTTTGCCCCGGACTGGAACAGCTGAGGCCGCCGCGCAAGTCATTGTTCTTGGGTGATGACCTGCTTc                                                    >  1:335673/1‑138 (MQ=255)                                                                                                            gTGCCGCTGGATGACGAAGACCGCACAGCCATTGCCGGGCTGCCGAAAGACCAGCGCGTGGTCAGCCCGCCGTTTGCCCCGGACTGGAACAGCTGAGGCCGCCGCGCAAGTCATTGTTCTTGGGTGATGACCTGCTTc                                                    <  2:335673/138‑1 (MQ=255)                                                                                                                       tGACGAAGACCGCACAGCCATTGCCGGGCTGCCGAAAGACCAGCGCGTGGTCAGCCCGCCGTTTGCCCCGGACTGGAACAGCTGAGGCCGCCGCGCAAGTCATTGTTCTTGGGTGATGACCTGCTTCAACCGCTCGCTCGCCGGTgccg                              <  3:200084/149‑1 (MQ=255)                                                                                                                                      aGCCATTGCCGGGCTGCCGAAAGACCAGCGCGTGGTCAGCCCGCCGTTTGCCCCGGACTGGAACAGCTGAGGCCGCCGCGCAAGTCATTGTTCTTGGGTGATGACCTGCTTCAACCGCTCGCTCGCCGGTGCCGGCCGCCCGTaaaa                 <  5:175449/147‑1 (MQ=255)                                                                                                                                      aGCCATTGCCGGGCTGCCGAAAGACCAGCGCGTGGTCAGCCCGCCGTTTGCCCCGGACTGGAACAGCTGAGGCCGCCGCGCAAGTCATTGTTCTTGGGTGATGACCTGCTTCAACCGCTCGCTCGCCGGTGCCGGCCGCCCGTaaaa                 >  6:175449/1‑147 (MQ=255)                                                                                                                                       gCCATTGCCGGGCTGCCGAAAGACCAGCGCGTGGTCAGCCCGCCGTTTGCCCCGGACTGGAACAGCTGAGGCCGCCGCGCAAGTCATTGTTCTTGGGTGATGACCTGCTTCAACCGCTCGCTCGCCGGTGCCGGCCGCCCGTAAAAGTa              <  2:47846/149‑1 (MQ=255)                                                                                                                                        ccATTGCCGGGCTGCCGAAAGACCAGCGCGTGGTCAGCCCGCCGTTTGCCCCGGACTGGAACAGCTGAGGCCGCCGCGCAAGTCATTGTTCTTGGGTGATGACCTGCTTCAACCGCTCGCTCGCCGGTGCCGGCCGCCCGTAAAAGTAg             >  6:356177/1‑149 (MQ=255)                                                                                                                                          aTTGCCGGGCTGCCGAAAGACCAGCGCGTGGTcagcccggcaatggctgtgcggtcttcgtcatccagcggcacggtcaacgcggccaggttggccagctggttttcgcggctgctggctttggggatcgccgccacgccgtcctggtc           <  4:56069‑M2/149‑118 (MQ=255)                                                                                                                                             gCCGGGCTGCCGAAAGACCAGCGCGTGGTCAGCCCGCCGTTTGCCCCGGACTGGAACAGCTGAGGCCGCCGCGCAAGTCATTGTTCTTGGGTGATGACCTGCTTCAACCGCTCGCTCGCCGGTGCCGGCCGCCCGTAAAAGTAGCCCt         <  5:24096/148‑1 (MQ=255)                                                                                                                                                gggCTGCCGAAAGACCAGCGCGTGGTCAGCCCGCCGTTTGCCCCGGACTGGAACAGCTGAGGCCGCCGCGCAAGTCATTGTTCTTGGGTGATGACCTGCTTCAACCGCTCGCTCGCCGGTGCCGGCCGCCCGTAAAAGTAGCCCTgg       >  8:287661/1‑147 (MQ=255)                                                                                                                                                  gCTGaccacgcgctggtctttcggcagcccggcaatggctgtgcggtcttcgtcatccagcggcacggtcaacgcggccaggttggccagctggttttcgcggctgctggctttggggatcgccgccacgccgtcctggtccagcagcc   <  1:40675‑M1/149‑146 (MQ=255)                                                                                                                                                   cTGaccacgcgctggtctttcggcagcccggcaatggctgtgcggtcttcgtcatccagcggcacggtcaacgcggccaggttggccagctggttttcgcggctgctggctttggggatcgccgccacgccgtcctggtccagcagcca  >  1:274026‑M1/1‑3 (MQ=255)                                                                                                                                                    tGCCGAAAGACCAGCGCGTGGTcagcccggcaatggctgtgcggtcttcgtcatccagcggcacggtcaacgcggccaggttggcc                                                                <  2:289‑M2/86‑65 (MQ=255)                                                                                                                                                    tGCCGAAAGACCAGCGCGTGGTcagcccggcaatggctgtgcggtcttcgtcatccagcggcacggtcaacgcggccaggttggcc                                                                >  1:289‑M2/1‑22 (MQ=255)                                                                                                                                                    tGCCGAAAGACCAGCGCGTGGTCAGCCCGCCGTTTGCCCCGGACTGGAACAGCTGAGGCCGCCGCGCAAg                                                                                <  7:79081/70‑1 (MQ=255)                                                                                                                                                    tGCCGAAAGACCAGCGCGTGGTCAGCCCGCCGTTTGCCCCGGACTGGAACAGCTGAGGCCGCCGCGCAAg                                                                                >  8:79081/1‑70 (MQ=255)                                                                                                                                                     |                                                                                                                                                   TGCCCAGCCAGGTGGCGCTGAAATGGCTGCTGGACCAGGACGGCGTGGCGGCGATCCCCAAAGCCAGCAGCCGCGAAAACCAGCTGGCCAACCTGGCCGCGTTGACCGTGCCGCTGGATGACGAAGACCGCACAGCCATTGCCGGGCTGCCGAAAGACCAGCGCGTGGTCAGCCCGCCGTTTGCCCCGGACTGGAACAGCTGAGGCCGCCGCGCAAGTCATTGTTCTTGGGTGATGACCTGCTTCAACCGCTCGCTCGCCGGTGCCGGCCGCCCGTAAAAGTAGCCCTGGAAGTG  >  NC_002947/4172989‑4173283

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.