| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 4394498 = | 46 (0.810) | 3 (0.050) | 3/254 | NT | 5.9% | coding (474/1488 nt) | PP_3869 | sheath protein |
| ? | NC_002947 | 4394568 = | 50 (0.900) | coding (404/1488 nt) | PP_3869 | sheath protein | |||||
GGTGGCCAGGTCAACCTGTACATCGGCGGCCAGCGCGTGCGCGCTACGGTAGCCAGTGGCGCCTCGGCGGCAGCGGTGGCCACTGCGCTGGCGGCGGCGGTAAACGCCGCCGGCCTTGGCGTATCGGCGACTGCAGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4394635‑4394498‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccGCCGAGGCGCCACTGGCTACCGTAGCGCGCACGCGCTGGCCGCCGATGTACAGGTTGACCTGGCCACCCTCCGTGGCGGTGCCGGTGATGGTCACCTTGCCGGCCGCCTTGGTACCGGTCGCCTTGAGCGGCAGGCACCAGACCTCGC > NC_002947/4394568‑4394715 GGTGGCCAGGTCAACCTGTACATCGGCGGCCAGCGCGTGCGCGCTACGGTAGCCAGTGGCGCCTCGGCGGCATCGGTGGCCACTGCGCTGGAGGCGGCGGTAAACGCCGCCGGCCTTGGCGTATCGGCGACTGCAGCC < 7:133028/138‑1 CTCGGCGGCAGCGGTGGCCACTGCGCTGGCGGCGGCGGTAAACGCCGCCGGCCTTGGCGTATCGGCGACTGCAGCCGCCGAGGCGCCACTGGCTACCGTAGCGCGCACGCGCTGGCCGCCGATGTACAGGTTGACCTGGCCACCCTCCG > 7:89184/1‑149 GCGGCAGCGGTGGCCACTGCGCTGGCGGCGGCGGTAAACGCCGCCGGCCTTGGCGTATCGGCGACTGCAGCCGCCGAGGCGCCACTGGCTACCGTAGCGCGCACGCGCTGGCCGCCGATGTACAGGTTGACCTGGCCACCCTCCGTGGC > 5:184980/1‑149 CGGCGGCGGTAAACGCCGCCGGCCTTGGCGTATCGGCGACTGCAGCCGCCGAGGCGCCACTGGCTACCGTAGCGCGCACGCGCTGGCCGCCGATGTACAGGTTGACCTGGCCACCCTCCGTGGCGGTGCCGGTGATGGTCACCTTGCCG < 6:184980/149‑1 CCGCCGAGGCGCCACTGGCTACCGTAGCGCGCACGCGCTGGCCGCCGATGTACAGGTTGACCTGGCCACCCTCCGTGGCGGTGCCGGTGATGGTCACCTTGCCGGCCGCCTTGGTACCGGTCGCCTTGAGCGGCAGGCACCAGACCTCG > 7:304453/1‑149 CGCCGAGGCGCCACTGGCTACCGTAGCGCGCACGCGCTGGCCGCCGATGTACAGGTTGACCTGGCCACCCTCCGTGGCGGTGCCGGTGATGGTCACCTTGCCGGCCGCCTTGGTACCGGTCGCCTTGAGCGGCAGGCACCAGACCTCGC < 8:89184/149‑1 GGTGGCCAGGTCAACCTGTACATCGGCGGCCAGCGCGTGCGCGCTACGGTAGCCAGTGGCGCCTCGGCGGCAGCGGTGGCCACTGCGCTGGCGGCGGCGGTAAACGCCGCCGGCCTTGGCGTATCGGCGACTGCAGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4394635‑4394498‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccGCCGAGGCGCCACTGGCTACCGTAGCGCGCACGCGCTGGCCGCCGATGTACAGGTTGACCTGGCCACCCTCCGTGGCGGTGCCGGTGATGGTCACCTTGCCGGCCGCCTTGGTACCGGTCGCCTTGAGCGGCAGGCACCAGACCTCGC > NC_002947/4394568‑4394715 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |