New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	4445662 =	44 (0.780)	3 (0.060)	3/244	NT	6.8%	coding (758/807 nt)	nicD	N‑formylmaleamate deformylase
	?	NC_002947	4445717 =	41 (0.770)					coding (703/807 nt)	nicD	N‑formylmaleamate deformylase

CCTGCGGTGCGCCAGCCGGCATTGCTGATGGTGGCCGGGCGGGGTGGAGTGATCGAGCCCCGTGACATTGCTGAAATGCGCGAGCTCAAGCCGGATATCCAGGTCGCGTACGTGGACAACGCCGGCCACATGATCCCCTGGGATGACCTGGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/4445813‑4445662 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gacctggaTATCCGGCTTGAGCTCGCGCATTTCAGCAATGTCACGGGGCTCGATCACTCCACCCCGCCCGGCCACCATCAGCAATGCCGGCTGGCGCACCGCAGGCAGGTACTGGTGGATATCGACCTCGTGGAAATCATCGAAGGCCC  >  NC_002947/4445717‑4445857                                                                                                                                                                                                                                                                                                       CCTGCGGTGCGCCAGCCGGCATTGCTGATGGTGGCCGGGCGGGGTGGAGTGATCGAGCCCCGTGACATTGCTGAAATGCGCGAGCTCAAGCCGGATATCCAGGTCGCGTACGTGGACAACGCCGGCCACATGATCCCCTGGGATGAC                                                                                                                                                    <  5:298880/147‑1                                                                                              GATATCCAGGTCGCGTACGTGGACAACGCCGGCCACATGATCCCCTGGGATGACCTGGATATCCGGCTTGAGCTCGCGCATTTCAGCAATGTCACGGGGCTCGATCACTCCACCCCGCCCGGCCACCATCAGCAATGCCGGCTGGCGCA                                                     >  5:250617/1‑149                                                                                                    CAGGTCGCGTACGTGGACAACGCCGGCCACATGATCCCCTGGGATGACCTGGATATCCGGCTTGAGCTCGCGCATTTCAGCAATGTCACGGGGCTCGATCACTCCACCCCGCCCGGCCACCATCAGCAATGCCGGCTGGCGCACCGCAG                                               >  5:352308/1‑149                                                                                                       GTCGCGTACGTGGACAACGCCGGCCACATGATCCCCTGGGATGACCTGGATATCCGGCTTGAGCTCGCGCATTTCAGCAATGTCACGGGGCTCGATCACTCCACCCCGCCCGGCCACCATCAGCAATGCCGGCTGGCGCACCGCAGGCA                                            <  6:352308/149‑1                                                                                                                                                 GACCTGGATATCCGGCTTGAGCTCGCGCATTTCAGCAATGTCACGGGGCTCGATCACTCCACCCCGCCCGGCCACCATCAGCAATGCCGGCTGGCGCACCGGAGGCAGGTACTGGTGGATATCGACCTCGTGGAAATCATCGAAGGCCC  <  6:232893/149‑1                                                                                                                                                 GACCTGGATATCCGGCTTGAGCTCGCGCATTTCAGCAATGTCACGGGGCTCGATCACTCCACCCCGCCCGGCCACCATCAGCAATGCCGGCTGGCGCACCGCAGGCAGGTACTGGTGGATATCGACCTCGTTGAAATCATCGAAGGCCC  >  4:78234/1‑149                                                                                                                                                 GACCTGGATATCCGGCTTGAGCTCGCGCATTTCAGCAATGTCACGGGGCTCGATCACTCCACCCCGCCCGGCCACCATCAGCAATGCCGGCTGGCGCACCGCAGGCAGGTACTGGTGGATATCGAC                         >  3:184268/1‑126                                                                                                                                                 GACCTGGATATCCGGCTTGAGCTCGCGCATTTCAGCAATGTCACGGGGCTCGATCACTCCACCCCGCCCGGCCACCATCAGCAATGCCGGCTGGCGCACCGCAGGCAGGTACTGGTGGATATCGAC                         <  4:184268/126‑1                                                                                                                                                                                                                                                                                                       CCTGCGGTGCGCCAGCCGGCATTGCTGATGGTGGCCGGGCGGGGTGGAGTGATCGAGCCCCGTGACATTGCTGAAATGCGCGAGCTCAAGCCGGATATCCAGGTCGCGTACGTGGACAACGCCGGCCACATGATCCCCTGGGATGACCTGGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/4445813‑4445662 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gacctggaTATCCGGCTTGAGCTCGCGCATTTCAGCAATGTCACGGGGCTCGATCACTCCACCCCGCCCGGCCACCATCAGCAATGCCGGCTGGCGCACCGCAGGCAGGTACTGGTGGATATCGACCTCGTGGAAATCATCGAAGGCCC  >  NC_002947/4445717‑4445857

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.