| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 4584828 | 33 (0.580) | 3 (0.060) | 3/244 | NT | 8.3% | coding (756/1986 nt) | glgE | alpha‑1,4‑glucan:maltose‑1‑phosphate maltosyltransferase |
| ? | NC_002947 | = 4584875 | 35 (0.660) | coding (709/1986 nt) | glgE | alpha‑1,4‑glucan:maltose‑1‑phosphate maltosyltransferase | |||||
GCAGCCACCAGTCGACGGAAGTCATCGCGGCTGCCCAGTTGCGGGTGAATCGCCTCGTGGCCGCCCTCCGGGCTGCCAATGGCATACGGGCTACCCGGGTCGCCCGGCTCGGCCTTGAGGGCGTTGTTGCGGCCCTTGCGATGCTGCATGCCGATG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4584673‑4584828‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgccgatgATCCGCGACATGGGCTTCGACGTCCTGTACTTCCCGCCCATCCACCCCATCGGCATGCAGCA < NC_002947/4584875‑4584814 GCAGCCACCAGTCGACGGAAGTCATCGCGGCTGCCCAGTTGCGGGTGAATCGCCTCGTGGCCGCCCTCCGGGCTGCCAATGGCATACGGGCTACCCGGGTCGCCCGGCTCGGCCTTGAGGGCGTTGTTGCGGCCCTTGCGATGCTGCAT < 1:82471/149‑1 ACCAGTCGACGGAAGTCATCGCGGCTGCCCAGTTGCGGGTGAATCGCCTCGTGGCCGCCCTCCGGGCTGCCAATGGCATACGGGCTACCCGGGTCGCCCGGCTCGGCCTTGAGGGCGTTGTTGCGGCCCTTGCGATGCTGCATGCCGAT < 4:316473/149‑1 ACCAGTCGACGGAAGTCATCGCGGCTGCCCAGTTGCGGGTGAATCGCCTCGTGGCCGCCCTCCGGGCTGCCAATGGCATACGGGCTACCCGGGTCGCCCGGCTCGGCCTTGAGGGCGTTGTTGCGGCCCTTGCGATGCTGCATGCCGAT > 8:153398/1‑149 GTCGACGGAAGTCATCGCGGCTGCCCAGTTGCGGGTGAATCGCCTCGTGGCCGCCCTCCGGGCTGCCAATGGCATACGGGCTACCCGGGTCGCCCGGCTCGGCCTTGAGGGCGTTGTTGCGGCCCTTGCGATGCTGCATGC > 5:241897/1‑141 GTCGACGGAAGTCATCGCGGCTGCCCAGTTGCGGGTGAATCGCCTCGTGGCCGCCCTCCGGGCTGCCAATGGCATACGGGCTACCCGGGTCGCCCGGCTCGGCCTTGAGGGCGTTGTTGCGGCCCTTGCGATGCTGCATGC < 6:241897/141‑1 GGGCTGCCAATGGCATACGGGCTACCCGGGTCGCCCGGCTCGGCCTTGAGGGCGTTGTTGCGGCCCTTGCGATGCGGTATGCCGATGATCCGCGACATGGGCTTCGACGTCCTGTACTTCCCGCCCATCCACCCCATCGGCATGCAGCA < 5:259187/149‑1 TGCCAATGGCATACGGGCTACCCGGGTCGCCCGGCTCGGCCTTGAGGGCGTTGTTGCGGCCCTTGCGATGCTGCATGCCGATGATCCGCGACATGGGCTTCGACGTCCTGTACTTCCCGCCCATCCACCCCATCGGCAT > 5:10532/1‑139 TGCCAATGGCATACGGGCTACCCGGGTCGCCCGGCTCGGCCTTGAGGGCGTTGTTGCGGCCCTTGCGATGCTGCATGCCGATGATCCGCGACATGGGCTTCGACGTCCTGTACTTCCCGCCCATCCACCCCATCGGCAT < 6:10532/139‑1 GCAGCCACCAGTCGACGGAAGTCATCGCGGCTGCCCAGTTGCGGGTGAATCGCCTCGTGGCCGCCCTCCGGGCTGCCAATGGCATACGGGCTACCCGGGTCGCCCGGCTCGGCCTTGAGGGCGTTGTTGCGGCCCTTGCGATGCTGCATGCCGATG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4584673‑4584828‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgccgatgATCCGCGACATGGGCTTCGACGTCCTGTACTTCCCGCCCATCCACCCCATCGGCATGCAGCA < NC_002947/4584875‑4584814 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |