New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	4833596 =	52 (0.920)	4 (0.080)	4/242	NT	8.7%	coding (459/801 nt)	PP_4246	substrate‑binding protein
	?	NC_002947	4833641 =	36 (0.680)					coding (414/801 nt)	PP_4246	substrate‑binding protein

GGGCTGGGAGCAGATTGCCCATCAGGCCGTGGACATGGGCCTGGAAGATGCCGAAGTGTTCGTCGCCCGCAAGGCAAACGGCAATGATCCGCATTATTTCGATGACCTGCGCGGCAAACGCCTGGCCTTGTTCAACGGCTACCACTACGCGTTTGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/4833752‑4833596 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgtttgccGCGCAGGTCATCGAAATAATGCGGATCATTGCCGTTTGCCTTGCGGGCGACGAACACTTCGGCATCTTCCAGGCCCATGTCCACGGCCTGATGGGCAATCTGCTCCCAGCCCCATTGTGGGTTCTCGAAAATCGCCATGTCGGTGC  >  NC_002947/4833641‑4833786                                                                                                                                                                                                                                                                                                                 GGGCTGGGAGCAGATTGCCCATCAGGCCGTGGACATGGGCCTGGAAGATGCCGAAGTGTTCGTCGCCCGCAAGGCAAACGGCAATGATCCGCATTATTTCGATGACCTGCGCGGCAAACGCCTGGCCTTGTTCAACGGCTACCACTACG                                                                                                                                                            >  7:242323/1‑149          GCAGATTGCCCATCAGGCCGTGGACATGGGCCTGGAAGATGCCGAAGTGTTCGTCGCCCGCAAGGCAAACGGCAATGATCCGCATTATTTCGATGACCTGCGCGGCAAACGCCTGGCCTTGTTCAACGGCTACCACTACGCGTTTGC                                                                                                                                                     >  5:79737/1‑147          GCAGATTGCCCATCAGGCCGTGGACATGGGCCTGGAAGATGCCGAAGTGTTCGTCGCCCGCAAGGCAAACGGCAATGATCCGCATTATTTCGATGACCTGCGCGGCAAACGCCTGGCCTTGTTCAACGGCTACCACTACGCGTTT                                                                                                                                                       >  3:160839/1‑145          GCAGATTGCCCATCAGGCCGTGGACATGGGCCTGGAAGATGCCGAAGTGTTCGTCGCCCGCAAGGCAAACGGCAATGATCCGCATTATTTCGATGACCTGCGCGGCAAACGCCTGGCCTTGTTCAACGGCTACCACTACGCGTTT                                                                                                                                                       <  4:160839/145‑1                                                                                                                CGGCAAACGCCTGGCCTTGTTCAACGGCTACCACTACGCGTTTGCCGCGCAGGTCATCGAAATAATGCGGATCATTGCCGTTTGCCTTGCGGGCGACGAACACTTCGGCATCTTCCAGGCCCATGTCCACGGCCTGATGGGCAATCTGC                                             >  1:189307/1‑149                                                                                                                 GGCAAACGCCTGGCCTTGTTCAACGGCTACCACTACGCGTTTGCCGCGCAGGTCATCGAAATAATGCGGATCATTGCCGTTTGCCTTGCGGGCGACGAACACTTCGGCATCTTCCAGGCCCATGTCCACGGCCTGATGGGCAATCTGCT                                            >  4:56891/1‑149                                                                                                                  GCAAACGCCTGGCCTTGTTCAACGGCTACCACTACGCGTTTGCCGCGCAGGTCATCGAAATAATGCGGATCATTGCCGTTTGCCTTGCGGGCGACGAACACTTCGGCATCTTCCAGGCCCATGTCCACGGCCTGATGGGCAATCTGCTC                                           >  3:97571/1‑149                                                                                                                                   TTCAACGGCTACCACTACGCGTTTGCCGCGCAGGTCATCGAAATAATGCGGATCATTGCCGTTTGCCTTGCGGGCGACGAACACTTCGGCATCTTCCAGGCCCATGTCCACGGCCTGATGGGCAATCTGCTCCCAGCCCCATTGTGGGT                          <  2:189307/149‑1                                                                                                                                                            CCGCGCAGGTCATCGAAATAATGCGGATCATTGCCGTTTGCCTTGCGGGCGACGAACACTTCGGCATCTTCCAGGCCCATGTCCACGGCCTGATGGGCAATCTGCTCCCAGCCCCATTGTGGGTTCTCGAAAATCGCCATGTCGGTGC  <  3:56891/148‑1                                                                                                                                                                                                                                                                                                                 GGGCTGGGAGCAGATTGCCCATCAGGCCGTGGACATGGGCCTGGAAGATGCCGAAGTGTTCGTCGCCCGCAAGGCAAACGGCAATGATCCGCATTATTTCGATGACCTGCGCGGCAAACGCCTGGCCTTGTTCAACGGCTACCACTACGCGTTTGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/4833752‑4833596 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgtttgccGCGCAGGTCATCGAAATAATGCGGATCATTGCCGTTTGCCTTGCGGGCGACGAACACTTCGGCATCTTCCAGGCCCATGTCCACGGCCTGATGGGCAATCTGCTCCCAGCCCCATTGTGGGTTCTCGAAAATCGCCATGTCGGTGC  >  NC_002947/4833641‑4833786

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.