| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 5105003 | 37 (0.650) | 5 (0.100) | 4/240 | NT | 12.0% | intergenic (+26/+88) | yhhS/ydiJ | carbohydrate efflux transporter/putative oxidoreductase |
| ? | NC_002947 | = 5105048 | 39 (0.750) | intergenic (+71/+43) | yhhS/ydiJ | carbohydrate efflux transporter/putative oxidoreductase | |||||
TTCGATGTTTCTGTTCGCGGCGGCTGCGGCAGCGTGCGGGTTGGTGTTGAGCCTCTATTTGTACCGCCAAGGGCGTAGGGACAGGGACCGTACAACAGAAGCCTGAAAGCCGCTGCCGGCCTCTTCGCGGGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5104872‑5105003‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cttcgcgggtGAACCCGCTCCTACGGGGGATCGTGCACGCCAGGGGGGCGGGGTTACCCGCGAAGAGGCCGGCAGCGGCTTTCAGGCTTCTGTTGTACGGTCCCTGTCCCTACGCCCTTGGCGGTACAAATAGAGGCTCAACACCAACCCGCACGC < NC_002947/5105048‑5104903 TTCGATGTTTCTGTTCGCGGCGGCTGCGGCAGCGTGCGGGTTGGTGTTGAGCCTCTATTTGTACCGCCAAGGGCGTAGGGACAGGGACCGTACAACAGAAGCCTGAAAGCCGCTGCCGGCCTCTTCGCGG < 7:40863/130‑1TTCGATGTTTCTGTTCGCGGCGGCTGCGGCAGCGTGCGGGTTGGTGTTGAGCCTCTATTTGTACCGCCAAGGGCGTAGGGACAGGGACCGTACAACAGAAGCCTGAAAGCCGCTGCCGGCCTCTTCGCGG > 8:40863/1‑130 TGCGGCAGCGTGCGGGTTGGTGTTGAGCCTCTATTTGTACCGCCAAGGGCGTAGGGACAGGGACCGTACAACAGAAGCCTGAAAGCCGCTGCCGGCCTCTTCGCGGGTGAACCCGCTCCTACGGGGGATCGTGCACGCCAGGGGGGCGG > 5:65403/1‑149 TGCGGGTTGGTGTTGAGCCTCTATTTGTACCGCCAAGGGCGTAGGGACAGGGACCGTACAACAGAAGCCTGAAAGCCGCTGCCGGCCTCTTCGCGGGTGAACCCGCTCCTACGGGGGATCGTGCACGCCAGGGGGGCGGGGTTACCCGC < 6:65403/149‑1 GCGGGTGTGGGTAGAGCCTCTATTTGTACCTCCACGGGCGTAGGGACCGGGACCGTACAACAGCAGCCTGAAACCCGCTGCCGGCCTCTTCGCGGGTGAACCCGCTCCTACGGGGGATCGTGCACGCCAGGGGGGCGGGGTTACCCGCG < 8:151704/149‑1 CCTCTATTTGTACCGCCAAGGGCGTAGGGACAGGGACCGTACAACAGAAGCCTGAAAGCCGCTGCCGGCCTCTTCGCGGGTGAACCCGCTCCTACGGGGGATCGTGCACGCCAGGGGGGCGGGGTTACCCGCG > 1:187049/1‑133 CCTCTATTTGTACCGCCAAGGGCGTAGGGACAGGGACCGTACAACAGAAGCCTGAAAGCCGCTGCCGGCCTCTTCGCGGGTGAACCCGCTCCTACGGGGGATCGTGCACGCCAGGGGGGCGGGGTTACCCGCG < 2:187049/133‑1 GGTGAACCCGCTCCTACGGGGGATCGTGCACGCCAGGGGGGCGGGGTTACCCGCGAAGAGGCCGGCAGCGGCTTTCAGGCTTCTGTTGTACGGTCCCTGTCCCTACGCCCTTGGCGGTACAAATAGAGGCTCAACACCAACCCGCACGC > 7:27901/1‑149 TTCGATGTTTCTGTTCGCGGCGGCTGCGGCAGCGTGCGGGTTGGTGTTGAGCCTCTATTTGTACCGCCAAGGGCGTAGGGACAGGGACCGTACAACAGAAGCCTGAAAGCCGCTGCCGGCCTCTTCGCGGGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5104872‑5105003‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cttcgcgggtGAACCCGCTCCTACGGGGGATCGTGCACGCCAGGGGGGCGGGGTTACCCGCGAAGAGGCCGGCAGCGGCTTTCAGGCTTCTGTTGTACGGTCCCTGTCCCTACGCCCTTGGCGGTACAAATAGAGGCTCAACACCAACCCGCACGC < NC_002947/5105048‑5104903 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |