| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 5461198 | 51 (0.900) | 3 (0.050) | 3/254 | NT | 6.1% | coding (138/1317 nt) | PP_4798 | membrane‑bound lytic murein transglycosylase |
| ? | NC_002947 | = 5461230 | 43 (0.780) | coding (170/1317 nt) | PP_4798 | membrane‑bound lytic murein transglycosylase | |||||
TTCCGTCTTATCCCCCGCTGGGAAACCCGCCAGCTGATCGCGGCCTCCAGCTTCATCCTGCTCGTGGCCTGTGCGGAAAAGCCCACCGCCGCCGACGCGCTGCCGCTGGCCCCTGCCCAACCCAATCCCGTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5461067‑5461198‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtgCTGACGTCGGGCGTTGCGCCGGGCACGGTCACCACGGGATTGGGTTGGGCAGGGGCCAGCGGCAGCGCGTCGGCGGCGGTGGGCTTTTCCGCACAGGCCACGAGCAGGATGAAGCTGGAGGCCGCGATCAGCTGGCGGGTTTCCCAGC < NC_002947/5461230‑5461083 TTCCGTCTTATCCCCCGCTGGGAAACCCGCCAGCTGATCGCGGCCTCCAGCTTCATCCTGCTCGTGGCCTGTGCGGAAAAGCCCACCGCCGCCGACGCGCTGCCGCTGGCCCCTGCCCAACCCAATCCCG > 3:248409/1‑130TTCCGTCTTATCCCCCGCTGGGAAACCCGCCAGCTGATCGCGGCCTCCAGCTTCATCCTGCTCGTGGCCTGTGCGGAAAAGCCCACCGCCGCCGACGCGCTGCCGCTGGCCCCTGCCCAACCCAATCCCG < 4:248409/130‑1 GGGAAACCCGCCAGCTGATCGCGGCCTCCAGCTTCATCCTGCTCGTGGCCTGTGCGGAAAAGCCCACCGCCGCCGACGCGCTGCCGCTGGCCCCTGCCCAACCCAATCCCGTGCTGACGTCGGGCGTTGCGCCGGGCACGGTCACCACG > 8:59562/1‑149 AAACCCGCCAGCTGATCGCGGCCTCCAGCTTCATCCTGCTCGTGGCCTGTGCGGAAAAGCCCACCGCCGCCGACGCGCTGCCGCTGGCCCCTGCCCAACCCAATCCCGTGCTGACGTCGGGCGTTGCGCCGGGCACGGTCACCACGGGA < 7:59562/149‑1 CGCCAGCTGATCGCGGCCTCCAGCCTCATCCTGCTCCTGGCCTGTGCGGAAAAGCCCACCGCCGCCGACGCGCTGCCGCTGGCCCCTGCCCAACCCAATCCCGTGCTGACGGCGGGCGTTGCGCCGGGCACGGTCACCACGGGATTGGG < 1:227465/149‑1 GCTGACGTCGGGCGTTGCGCCGGGCACGGTCACCACGGGATTGGGTTGGGCAGGGGCCAGCGGCAGCGCGTCGGCGGCGGTGGGCTTTTCCGCACAGGCCACGAGCAGGATGAAGCTGGAGGCCGCGATCAGCTGGCGGGTTTCCCAGC > 1:49347/1‑149 TTCCGTCTTATCCCCCGCTGGGAAACCCGCCAGCTGATCGCGGCCTCCAGCTTCATCCTGCTCGTGGCCTGTGCGGAAAAGCCCACCGCCGCCGACGCGCTGCCGCTGGCCCCTGCCCAACCCAATCCCGTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5461067‑5461198‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtgCTGACGTCGGGCGTTGCGCCGGGCACGGTCACCACGGGATTGGGTTGGGCAGGGGCCAGCGGCAGCGCGTCGGCGGCGGTGGGCTTTTCCGCACAGGCCACGAGCAGGATGAAGCTGGAGGCCGCGATCAGCTGGCGGGTTTCCCAGC < NC_002947/5461230‑5461083 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |