New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5714441	44 (0.780)	3 (0.060)	3/250	NT	6.4%	coding (195/393 nt)	hisI	phosphoribosyl‑AMP cyclohydrolase
	?	NC_002947	= 5714473	46 (0.840)					coding (227/393 nt)	hisI	phosphoribosyl‑AMP cyclohydrolase

CTGGTACCGGCGATCGCCCAGGACCACAAGACCGGACGCGTGCTGATGATGGCCTGGATGAACCGTGAATCGCTGGCCCTGACCGCCGCCGAGCAGCGTGCCATCTACTGGTCGCGTTCGCGTGGCAAGCTGTGGCGTAAAGGCGAGGAGTCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5714289‑5714441 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agtccAGGCGCAACTCATGCAGTTTTTGCACATGCCCGGACTCCTC  <  NC_002947/5714473‑5714433                                                                                                                                                                                                    CTGGTACCGGCGATCGCCCAGGACCACAAGACCGGACGCGTGCTGATGATGGCCTGGATGAACCGTGAATCGCTGGCCCTGACCGCCGCCGAGCAGCGTGCCATCTACTGGTCGCGTTCGCGTGGCAAGCTGTGGCGTAAAGGCGAGGA                                               <  2:344345/149‑1                                              ATGATGGCCTGGATGAACCGTGAATCGCTGGCCCTGACCGCCGCCGAGCAGCGTGCCATCTACTGGTCGCGTTCGCGTGGCAAGCTGTGGCGTAAAGGCGAGGAGTCCAGGCGCAACTCATGCAGTTTTTGCACATGCCCGGACTCCTC  <  1:172595/149‑1                                                               CCGTGAATCGCTGGCCCTGACCGCCGCCGAGCAGCGTGCCATCTACTGGTCGCGTTCGCGTGGCAAGCTGTGGCGTAAAGGCGAGGAGTCCAGGCGCAACTCATGCAGTTTTTGCACATGCCCGGAC       >  1:138147/1‑127                                                               CCGTGAATCGCTGGCCCTGACCGCCGCCGAGCAGCGTGCCATCTACTGGTCGCGTTCGCGTGGCAAGCTGTGGCGTAAAGGCGAGGAGTCCAGGCGCAACTCATGCAGTTTTTGCACATGCCCGGAC       <  2:138147/127‑1                                                                                                                                                                                                    CTGGTACCGGCGATCGCCCAGGACCACAAGACCGGACGCGTGCTGATGATGGCCTGGATGAACCGTGAATCGCTGGCCCTGACCGCCGCCGAGCAGCGTGCCATCTACTGGTCGCGTTCGCGTGGCAAGCTGTGGCGTAAAGGCGAGGAGTCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5714289‑5714441 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agtccAGGCGCAACTCATGCAGTTTTTGCACATGCCCGGACTCCTC  <  NC_002947/5714473‑5714433

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.