New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 5943622 | 28 (0.490) | 4 (0.090) | 4/216 | NT | 11.7% | intergenic (+30/+55) | PP_5210/PP_5211 | alcohol dehydrogenase/ChaC‑related protein |
? | NC_002947 | = 5943643 | 37 (0.790) | intergenic (+51/+34) | PP_5210/PP_5211 | alcohol dehydrogenase/ChaC‑related protein |
CCAGCTGTTTGCCTGGCATGCCGAGGGCAAGTTGAAGCCGCTGGTGTCGCAGACTTATCCACTGGCAGAAGCCGGGGTTGCTATCGAGAAGCTGGGGCAACGGCAGGCTGTGGGTAAGTTGGTGGTGCTGGCCAGGTAAGGCAGTAGCGGCCTCTTCGCGGGTAAACCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5943454‑5943622 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggcctcttcgcgggtaaacccTGCACGGTCGCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGCTACTGCCTTACCTGGCCAGCACCACCAACTTACCCACAGCCTGCCGTTGCCCCAGCTTCTCGATAGCAACCCCGGCTTCTGCCAGTGGATAAGTCTGCGACAC < NC_002947/5943643‑5943497 CCAGCTGTTTGCCTGGCATGCCGAGGGCAAGTTGAAGCCGCTGGTGTCGCAGACTTATCCACTGGCAGAAGCCGGGGTTGCTATCGAGAAGCTGGGGCAACGGCAGGCTGTGGGTAAGTTGGTGGTGCTGGCCAGGTAAGGCAGTAGCG > 5:81914/1‑149 CTGGCATGCCGAGGGCAAGTTGAAGCCGCTGGTGTCGCAGACTTATCCACTGGCAGAAGCCGGGGTTGCTATCGAGAAGCTGGGGCAACGGCAGGCTGTGGGTAAGTTGGTGGTGCTGGCCAGGTAAGGCAGTAGCGGCCTCTTCGCGG < 4:151346/149‑1 GCATGCCGACGGCAAGTTGAAGCCGGTGGTGTCGCAGACTTATCCACTGGCAGAAGCCGGGGTTGCTATCGAGAAGCTGGTGCAACGGCATGCTGTGGGTAAGTTGGTGGTGCTGGCCAGGTAAGGCAGTAGCGGCCTCTTCGCGGGTA < 7:112033/149‑1 GACTTATCCACTGGCAGAAGCCGGGGTTGCTATCGAGAAGCTGGGGCAACGGCAGGCTGTGGGTAAGTTGGTGGTGCTGGCCAGGTAAGGCAGTAGCGGCCTCTTCGCGGGTAAACCCTGCACGGTCGCCTGTAGGAGCGGGTTTACCC < 1:362574/149‑1 TTATCCACTGGCAGAAGCCGGGGTTGCTATCGAGAAGCTGGGGCAACGGCAGGCTGTGGTTAAGTTGGTGGTGCTGGCCAGGTAAGGCAGTAGCGGCCTCTTCGCGGGTAAA < 5:159004/112‑1 TTATCCACTGGCAGAAGCCGGGGTTGCTATCGAGAAGCTGGGGCAACGGCAGGCTGTGGGTAAGTTGGTGGTGCTGGCCAGGTAAGGCAGTAGCGGCCTCTTCGCGGGTAAA > 6:159004/1‑112 AGAAGCCGGGGTTGCTATCGAGAAGCTGGGGCAACGGCAGGCTGTGGGTAAGTTGGTGGTGCTGGCCAGGTAAGGCAGTAGCGGCCTCTTCGCGGGTAAACCCTGCACGGTCGCCTGTAGGAGCGG > 8:331224/1‑126 TATCGAGAAGCTGGGGCAACGGCAGGCTGTGGGTAAGTTGGTGGTGCTGGCCAGGTAAGGCAGTAGCGGCCTCTTCGCGGGTAAACCCTGCACGGTCGCCTGTAGGAGCGGGTTTAC < 2:322689/117‑1 TATCGAGAAGCTGGGGCAACGGCAGGCTGTGGGTAAGTTGGTGGTGCTGGCCAGGTAAGGCAGTAGCGGCCTCTTCGCGGGTAAACCCTGCACGGTCGCCTGTAGGAGCGGGTTTAC > 1:322689/1‑117 CCTCTTCGCGGGTAAACCCTGCACGGTCGCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGCTACTGCCTTACCTGGCCAGCACCACCAACTTACCCACAGCCTGCCGTTGCCCCAGCTTCTCGATAGCAACCCCGGCTTCTGCCAGT < 7:320191/149‑1 CTCTTCGCGGGTAAACCCTGCACGGTCGCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGCTACTGCCTTACCTGGCCAGCACCACCAACTTACCCACAGCCTGCCGTTGACCCAGCTTCTCGATAGAAACCCAGGCTTCTGCCAGTG > 4:305753/1‑149 CGGGTAAACCCTGCACGGTCGCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGCTACTGCCTTACCTGGCCAGCACCACCAACTTACCCACAGCCTGCCGTTGCCCCAGCTTCTCGATAGCAACCCCGGCTTCTGCCAGTGGATAAGT > 6:81914/1‑149 GGTAAACCCTGCACGGTCGCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGCTACTGCCTTACCTGGCCAGCACCACCAACTTACCCACAGCCTGCCGTTGCCCCAGCTTCTCGATAGCAACCCCGGCTTCTGCCAGTGGATAAGTCT < 7:180922/149‑1 GTAAACCCTGCACGGTCGCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGCTACTGCCTTACCTGGCCAGCACCACCAACTTACCCACAGCCTGCCGTTGCCCCAGCTTCTCGATAGCAACCCCGGCTTCTGCCAGTGGATAAGTCTG < 1:207944/149‑1 CTGCACGGTCGCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGCTACTGCCTTACCTGGCCAGCACCACCAACTTACCCACAGCCTGCCGTTGCCCCAGCTTCTCGATAGCAACCCCGGCTTCTGCCAGTGGATAAGTCTGCGACAC > 8:322536/1‑148 CTGCACGGTCGCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGCTACTGCCTTACCTGGCCAGCACCACCAACTTACCCACAGCCTGCCGTTGCCCCAGCTTCTCGATAGCAACCCCGGCTTCTGCCAGTGGATAA < 4:322389/137‑1 CTGCACGGTCGCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGCTACTGCCTTACCTGGCCAGCACCACCAACTTACCCACAGCCTGCCGTTGCCCCAGCTTCTCGATAGCAACCCCGGCTTCTGCCAGTGGATAA > 3:322389/1‑137 CCAGCTGTTTGCCTGGCATGCCGAGGGCAAGTTGAAGCCGCTGGTGTCGCAGACTTATCCACTGGCAGAAGCCGGGGTTGCTATCGAGAAGCTGGGGCAACGGCAGGCTGTGGGTAAGTTGGTGGTGCTGGCCAGGTAAGGCAGTAGCGGCCTCTTCGCGGGTAAACCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5943454‑5943622 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggcctcttcgcgggtaaacccTGCACGGTCGCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGCTACTGCCTTACCTGGCCAGCACCACCAACTTACCCACAGCCTGCCGTTGCCCCAGCTTCTCGATAGCAACCCCGGCTTCTGCCAGTGGATAAGTCTGCGACAC < NC_002947/5943643‑5943497 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |