New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5943622	28 (0.490)	4 (0.090)	4/216	NT	11.7%	intergenic (+30/+55)	PP_5210/PP_5211	alcohol dehydrogenase/ChaC‑related protein
	?	NC_002947	= 5943643	37 (0.790)					intergenic (+51/+34)	PP_5210/PP_5211	alcohol dehydrogenase/ChaC‑related protein

GCAAGTTGAAGCCGCTGGTGTCGCAGACTTATCCACTGGCAGAAGCCGGGGTTGCTATCGAGAAGCTGGGGCAACGGCAGGCTGTGGGTAAGTTGGTGGTGCTGGCCAGGTAAGGCAGTAGCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGCGACCGTGCAGGGTTTACCCGCGAAGAGGCCGGAACAGGTTGCTCACACTTCGCGCAGATTGTGGCAACGCCTGAATCGCGCTTCCAGGTTGCGATCGGGCATCTGGTGACTGCGCAGTGCATTCAAGGTCTGCTC  >  NC_002947/5943480‑5943769                                                                                                                                               |                                                                                                                                                    gCAAGTTGAAGCCGCTGGTGTCGCAGACTTATCCACTGGCAGAAGCCGGGGTTGCTATCGAGAAGCTGGGGCAACGGCAGGCTGTGGGTAAGTTGGTGGTGCTGGCCAGGTAAGGCAGTAGCGGCCTCTTCGCGGGTAAACCCGCTcc                                                                                                                                                >  8:124750/1‑148 (MQ=255)   aaGTTGAAGCCGCTGGTGTCGCAGACTTATCCACTGGCAGAAGCCGGGGTTGCTATCTAGAAGCTGGGGCAACGGCAGGCTGTGGGTAAGTTGGTGGTGCTGGCCAGGTAAGGCAGTAGCGGCCTCTTCGCGGGTAAACCCGCTCCTAc                                                                                                                                             <  8:344980/149‑1 (MQ=255)     gTTGAAGCCGCTGGTGTCGCAGACTTATCCACTGGCAGAAGCCGGGGTTGCTATCGAGAAGCTGGGGCAACGGCAGGCTGTGGGTAAGTTGGTGGTGCTGGCCAGGTAAGGCAGTAGCGGCCTCTTCGCGGGTAAACCCGCTCCTACAg                                                                                                                                           <  7:124750/149‑1 (MQ=255)     gTTGAAGCCGCTGGTGTCGCAGACTTATCCACTGGCAGAAGCCGGGGTTGCTATCGAGAAGCTGGGGCAACGGCAGGCTGTGGGTAAGTTGGTGGTGCTGGCCAGGTAAGGCAGTAGCGGCCTCTTCGCGGGTAAACCCGCTCCTACAg                                                                                                                                           <  1:97413/149‑1 (MQ=255)                  gtgtCGCAGACTTATCCACTGGCAGAAGCCGGGGTTGCTATCGAGAAGCTGGGGCAACGGCAGGCTGTGGGTAAGTTGGTGGTGCTGGCCAGGTAAGGCAGTAGCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGCGACCGTGCAg                                                                                                                               >  8:322536‑M2/1‑147 (MQ=255)                        cAGACTTATCCACTGGCAGAAGCCGGGGTTGCTATCGAGAAGCTGGGGCAACGGCAGGCTGTGGGTAAGTTGGTGGTGCTGGCCAGGTAAGGCAGTAGCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGCGACCGTGCAgggtttac                                                                                                                        <  1:207944‑M2/149‑9 (MQ=255)                         aGACTTATCCACTGGCAGAAGCCGGGGTTGCTATCGAGAAGCTGGGGCAACGGCAGGCTGTGGGTAAGTTGGTGGTGCTGGCCAGGTAAGGCAGTAGCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGCGACCGTGCAgggtttacc                                                                                                                       <  7:180922‑M2/149‑10 (MQ=255)                          gACTTATCCACTGGCAGAAGCCGGGGTTGCTATCGAGAAGCTGGGGCAACGGCAGGCTGTGGGTAAGTTGGTGGTGCTGGCCAGGTAAGGCAGTAGCGGCCTCTTCGCGGGTAAACCCtgcacggtcgcctgtaggagcgggtttaccc                                                                                                                      <  1:362574‑M1/149‑32 (MQ=255)                           aCTTATCCACTGGCAGAAGCCGGGGTTGCTATCGAGAAGCTGGGGCAACGGCAGGCTGTGGGTAAGTTGGTGGTGCTGGCCAGGTAAGGCAGTAGCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGCGACCGTGCAgggtttacccg                                                                                                                     >  6:81914‑M2/1‑138 (MQ=255)                             ttATCCACTGGCAGAAGCCGGGGTTGCTATCGAGAAGCTGGGGCAACGGCAGGCTGTGGGTAAGTTGGTGGTGCTGGCCAGGTAAGGCAGTAGCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGCGACCGTGCAg                                                                                                                               <  4:322389‑M2/137‑2 (MQ=255)                             ttATCCACTGGCAGAAGCCGGGGTTGCTATCGAGAAGCTGGGGCAACGGCAGGCTGTGGGTAAGTTGGTGGTGCTGGCCAGGTAAGGCAGTAGCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGCGACCGTGCAg                                                                                                                               >  3:322389‑M2/1‑136 (MQ=255)                                  cACTGGCAGAAGCCTGGGTTTCTATCGAGAAGCTGGGTCAACGGCAGGCTGTGGGTAAGTTGGTGGTGCTGGCCAGGTAAGGCAGTAGCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGCGACCGTGCAgggtttacccgcgaagag                                                                                                              >  4:305753‑M2/1‑131 (MQ=255)                                   aCTGGCAGAAGCCGGGGTTGCTATCGAGAAGCTGGGGCAACGGCAGGCTGTGGGTAAGTTGGTGGTGCTGGCCAGGTAAGGCAGTAGCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGCGACCGTGCAgggtttacccgcgaagagg                                                                                                             <  7:320191‑M2/149‑20 (MQ=255)                                         aGAAGCCGGGGTTGCTATCGAGAAGCTGGGGCAACGGCAGGCTGTGGGTAAGTTGGTGGTGCTGGCCAGGTAAGGCAGTAGCGGCCTCTTCGCGGGTAAACCCtgcacggtcgcctgtaggagcgg                                                                                                                              >  8:331224‑M1/1‑103 (MQ=255)                                                        tATCGAGAAGCTGGGGCAACGGCAGGCTGTGGGTAAGTTGGTGGTGCTGGCCAGGTAAGGCAGTAGCGGCCTCTTCGCGGGTAAACCCtgcacggtcgcctgtaggagcgggtttac                                                                                                                        <  2:322689‑M1/117‑30 (MQ=255)                                                        tATCGAGAAGCTGGGGCAACGGCAGGCTGTGGGTAAGTTGGTGGTGCTGGCCAGGTAAGGCAGTAGCGGCCTCTTCGCGGGTAAACCCtgcacggtcgcctgtaggagcgggtttac                                                                                                                        >  1:322689‑M1/1‑88 (MQ=255)                                                        tATCGAGAAGCTGGGGCAACGGCAGGCTGTGGGTAAGTTGGTGGTGCTGGCCAGGTAAGGCAGTAGCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGCGACCGTGCAGGGTTTACCCGCGAAGAGGCCGGAACAGGTTGCTCACACt                                                                                        >  4:263784/1‑149 (MQ=255)                                                        tATCGAGAAGCTGGGGCAACGGCAGGCTGTGGGTAAGTTGGTGGTGCTGGCCAGGTAAGGCAGTAGCGGCCTCTTAGCGGGTAAACCCGCGGCAACAGGCGACCGTGGAGGGGTTTCCCGCGAAGAGGCCGGGACAGGTTGCGCGCACt                                                                                        >  3:16921/1‑149 (MQ=255)                                                         aTCGAGAAGCTGGGGCAACGGCAGGCTGTGGGTAAGTTGGTGGTGCTGGCCAGGTAAGGCAGTAGCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGCGACCGTGCAGGGTTTACCCGCGAAGAGGCCGGAACAGGTTGCt                                                                                              <  7:9609/142‑1 (MQ=255)                                                         aTCGAGAAGCTGGGGCAACGGCAGGCTGTGGGTAAGTTGGTGGTGCTGGCCAGGTAAGGCAGTAGCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGCGACCGTGCAGGGTTTACCCGCGAAGAGGCCGGAACAGGTTGCt                                                                                              >  8:9609/1‑142 (MQ=255)                                                                   tGGGGCAACGGCAGGCTGTGGGTAAGTTGGTGGTGCTGGCCAGGTAAGGCAGTAGCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGCGACCGTGCAGGGTTTACCCGCGAAGAGGCCGGAACAGGTTGCTcac                                                                                           >  7:88039/1‑135 (MQ=255)                                                                   tGGGGCAACGGCAGGCTGTGGGTAAGTTGGTGGTGCTGGCCAGGTAAGGCAGTAGCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGCGACCGTGCAGGGTTTACCCGCGAAGAGGCCGGAACAGGTTGCTcac                                                                                           <  8:88039/135‑1 (MQ=255)                                                                      ggatcgggCTGGGTGTGGTTATGTGGGTGGGGCGGCCCTGGAACGTCATTCGCGGCGTTTTCGGGGTAAAACCCGCTCCAACCGGCCACGGTGCCGGG‑TTACCCGCGAAGTGGCCGGAACAGGTTGCTCACACTTCGCGCAGATTGTgg                                                                         <  4:169505/143‑1 (MQ=255)                                                                      ggCAACGGCAGGCTGTGGGTAAGTTGGTGGTGCTGGCCAGGTAAGGCAGTAGCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGCGACCGTGCAGGGTTTACCCGCGAAGAGGCCGGAACAGGTTGCTCACACTTCGCGCAGATtgtg                                                                          <  2:207944/149‑1 (MQ=255)                                                                       gCAACGGCAGGCTGTGGGTAAGTTGGTGGTGCTGGCCAGGTAAGGCAGTAGCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGCGACCGTGCAGGGTTTACCCGCGAAGAGGCCGGAACAGGTTGCTCACACTTCGCGCAGATTGTgg                                                                         <  8:320191/149‑1 (MQ=255)                                                                                       ggTAAGTTGGTGGTGCTGGCCAGGTAAGGCAGTAGCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGCGACCGTGCAGGGTTTACCCGCGAAGAGGCCGGAACAGGTTGCTCACACTTCGCGCAGATTGTGGCAACGCCt                                                                 <  4:74852/141‑1 (MQ=255)                                                                                       ggTAAGTTGGTGGTGCTGGCCAGGTAAGGCAGTAGCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGCGACCGTGCAGGGTTTACCCGCGAAGAGGCCGGAACAGGTTGCTCACACTTCGCGCAGATTGTGGCAACGCCt                                                                 >  3:74852/1‑141 (MQ=255)                                                                                        gTAAGTTGGTGGTGCTGGCCAGGTAAGGCAGTAGCGGCCTCTTAGCGGGTAAACCCGCTGCTACAGGCGACCGTGCAGGGTTTACCCGCGAAGAGGCCGGAACAGGTTGCTCACACTTAGCGCAGATTGTGGCAACGCCTGAATCccgc                                                        >  1:202768/1‑149 (MQ=255)                                                                                         tAAGTTGGTGGTGCTGGCCAGGTAAGGCAGTAGCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGCGACCGTGCAGGGTTTACCCGCGAAGAGGCCGGAACAGGTTGc                                                                                               <  8:341296/109‑1 (MQ=255)                                                                                         tAAGTTGGTGGTGCTGGCCAGGTAAGGCAGTAGCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGCGACCGTGCAGGGTTTACCCGCGAAGAGGCCGGAACAGGTTGc                                                                                               >  7:341296/1‑109 (MQ=255)                                                                                                         gCCAGGTAAGGCAGTAGCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGCGACCGTGCAGGGTTTACCCGCGAAGAGGCCGGAACAGGTTGCTCACACTTCGCGCAGATTGTGGCAACGCCTGAATCGCGCTTCCAGGTTGCGATCgg                                       <  8:180922/149‑1 (MQ=255)                                                                                                         gCCAGGTAAGGCAGTAGCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGCGACCGTGCAGGGTTTACCCGCGAAGAGGCCGGAACAGGTTGCTCACACTTCGCGCAGATTGTGGCAACGCCTGAATCGCGCTTCCAGGTTGCGATCgg                                       <  3:263784/149‑1 (MQ=255)                                                                                                                aaGGCAGTAGCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGCGACCGTGCAGGGTTTACCCGCGAAGAGGCCGGAACAGGTTGCTCACACTTCGCGCAGATTGTGGCAACGCCt                                                                 <  2:43408/116‑1 (MQ=255)                                                                                                                aaGGCAGTAGCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGCGACCGTGCAGGGTTTACCCGCGAAGAGGCCGGAACAGGTTGCTCACACTTCGCGCAGATTGTGGCAACGCCt                                                                 >  1:43408/1‑116 (MQ=255)                                                                                                                 aGGCAGTAGCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGCGACCGTGCAGGGTTTACCCGCGAAGAGGCCGGAACAGGTTGCTCACACTTCGCGCAGATTGTGGCAACGCCTGAATCGCGCTTCCAGGTTGCGATCGGGCATCTgg                               >  7:180598/1‑149 (MQ=255)                                                                                                                  ggCAGTAGCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGCGACCGTGCAGGGTTTACCCGCGAAGAGGCCGGAACAGGTTGCTCACACTTCGCGCAGATTGTGGCAACGCCTGAATCGCGCTTCCAGGTTGCGATCGGGCATCTGGt                              <  7:21451/149‑1 (MQ=255)                                                                                                                       tAGCGGCCTCATCGCGGGTAAAACCGCACCTACAGGCGACCGTGGAGGGTTTACCCGCGAAGAGGCCGGAACACGTTGCTCACACTTAGCGCAGATTGTGGCAACGCCTGAAAAGCGCGTCCAGGTTTCGATCGGGCATATGGTGACTg                         >  2:325002/1‑149 (MQ=37)                                                                                                                            gCCTCTTCGCGGGTAAACCCGCTCCTACAGGCGACCGTGCAGGGTTTACCCGCGAAGAGGCCGGAACAGGTTGCTCACACTTCGCGCAGATTGTGGCAACGCCTGAATCGCGCTTCCAGGTTGCGATCGGGCATCTGGTGACTGCGCAg                    >  1:212014/1‑149 (MQ=255)                                                                                                                             ccTCTTCGCGGGTAAACCCtgcacggtcgcctgtaggagcgggtttacccgcgaagaggccgctactgccttacctggccagcaccaccaacttacccacagcctgccgttgccccagcttctcgatagcaaccccggcttctgccagt                   <  7:320191‑M1/149‑131 (MQ=255)                                                                                                                              ctctTCGCGGGTAAACCCtgcacggtcgcctgtaggagcgggtttacccgcgaagaggccgctactgccttacctggccagcaccaccaacttacccacagcctgccgttgacccagcttctcgatagaaacccaggcttctgccagtg                  >  4:305753‑M1/1‑18 (MQ=255)                                                                                                                               tctTCGCGGGTAAACCCGCTCCTACAGGCGACCGTGCAGGGTTTACCCGCGAAGAGGCCGGAACAGGTTGCTCACACTTCGCGCAGATTGTGGCAACGCCTGAATCGCGCTTCCAGGTTGCGATCGGGCATCTGGTGACTGCGCAGTg                  >  8:178267/1‑148 (MQ=255)                                                                                                                               tctTCGCGGGTAAACCCGCTCCTACAGGCGACCGTGCAGGGTGTACCCGCGAAGAGGCCGGAACAGGTTGCTCACACTTCGCGCAGATTGTGGCAACGCCTGAATCGCGCTTCCAGGGTGCGATCGGGCATCTGGTGACTGCGCAGTg                  >  5:258811/1‑148 (MQ=255)                                                                                                                                     cgGGTAAACCCtgcacggtcgcctgtaggagcgggtttacccgcgaagaggccgctactgccttacctggccagcaccaccaacttacccacagcctgccgttgccccagcttctcgatagcaaccccggcttctgccagtggataagt           >  6:81914‑M1/1‑11 (MQ=255)                                                                                                                                     cgGGTAAACCCGCTCCTACCGTCGACCTTGCAGGGTTTACCCGCGAAGAGGCCGGAACAGGTTGCTCACACTTCGCGCAGATTGTGGCAACGCCTGAATCGCGCTTCCAGGTTGCGATCGGGCATCTGGTGACTGCGCAGTGCATTCaa           <  8:180598/149‑1 (MQ=255)                                                                                                                                      gggTAAACCCGCTCCTACAGGCGACCGTGCAgggtttacccgcgaagaggccgctactgccttacctggccagcaccaccaacttacccacagcctgccgttgccccagcttctcgatagcaaccccggcttctgccagtggataagtc          <  1:362574‑M2/149‑119 (MQ=255)                                                                                                                                       ggTAAACCCtgcacggtcgcctgtaggagcgggtttacccgcgaagaggccgctactgccttacctggccagcaccaccaacttacccacagcctgccgttgccccagcttctcgatagcaaccccggcttctgccagtggataagtct         <  7:180922‑M1/149‑141 (MQ=255)                                                                                                                                        gTAAACCCtgcacggtcgcctgtaggagcgggtttacccgcgaagaggccgctactgccttacctggccagcaccaccaacttacccacagcctgccgttgccccagcttctcgatagcaaccccggcttctgccagtggataagtctg        <  1:207944‑M1/149‑142 (MQ=255)                                                                                                                                        gTAAACCCGCTCCTACAGGCGACCGTGCAgggtttacccgcgaagaggccgctactgccttacctggccagcaccaccaacttacccacagcctgccgttgccccagcttctcgata                                        <  2:322689‑M2/117‑89 (MQ=255)                                                                                                                                        gTAAACCCGCTCCTACAGGCGACCGTGCAgggtttacccgcgaagaggccgctactgccttacctggccagcaccaccaacttacccacagcctgccgttgccccagcttctcgata                                        >  1:322689‑M2/1‑29 (MQ=255)                                                                                                                                             cccGCTCCTACAGGCGATCGTGCAGGGTTTACCCGCGAAGAGGCCGGAACAGGTTGCTCACACTTCGCGCAGATTGTGGCAACGCCTGAATCGCGCTTCCAGGTTGCGATCGGGCATCTGGTGACTGCGCAGTGCATTCAAGGTCTGCt   >  3:108910/1‑149 (MQ=255)                                                                                                                                             cccGCTCCTACAGGCGACCGTGCAGGGTTTACCCGCGAAGAGGCCGGAACAGGTTGCTCACACTTCGCGCAGATTGTGGCAACGCCTGAATCGCGCTTCCAGGTTGCGATCGGGCATCTGGTGACTGCGCAGTGCATTCAAGGTCTGCt   >  3:348911/1‑149 (MQ=255)                                                                                                                                              ccGCTCCTACAGGCGACCGTGCAgggtttacccgcgaagaggccgctactgccttacctggccagcaccaccaacttacccacagcctgccgttgccccagcttctcgatagcaaccccggcttct                         >  8:331224‑M2/1‑23 (MQ=255)                                                                                                                                              ccGCTCCTACAGGCGACCGTGCAGGGTTTACCCGCGAAGAGGCCGGAACAGGTTGCTCACACTTCGCGCAGATTGTGGCAACGCCTGAATCGCGCTTCCAGGTTTCGATCGGGCATCt                                 >  6:263953/1‑118 (MQ=255)                                                                                                                                              ccGCTCCTACAGGCGACCGTGCAGGGTTTACCCGCGAAGAGGCCGGAACAGGTTGCTCACACTTCGCGCAGATTGTGGCAACGCCTGAATCGCGCTTCCAGGTTGCGATCGGGCATCt                                 <  5:263953/118‑1 (MQ=255)                                                                                                                                              ccGCTCCTACAGGCGACCGTGCAGGGTTTACCCGCGAAGAGGCCGGAACAGGTTGCTCACACTTCGCGCAGATTGTGGCAACGCCTGAATCGCGCTTCCAGGTTGCGATCGGGCATCTGGTGACTGCGCAGTGCATTCAAGGTCTGCTc  >  3:195797/1‑149 (MQ=255)                                                                                                                                               ctgcacggtcgcctgtaggagcgggtttacccgcgaagaggccgctactgccttacctggccagcaccaccaacttacccacagcctgccgttgccccagcttctcgatagcaaccccggcttctgccagtggataagtctgcgacac  >  8:322536‑M1/1‑1 (MQ=255)                                                                                                                                               ctgcacggtcgcctgtaggagcgggtttacccgcgaagaggccgctactgccttacctggccagcaccaccaacttacccacagcctgccgttgccccagcttctcgatagcaaccccggcttctgccagtggataa             >  3:322389‑M1/1‑1 (MQ=255)                                                                                                                                               ctgcacggtcgcctgtaggagcgggtttacccgcgaagaggccgctactgccttacctggccagcaccaccaacttacccacagcctgccgttgccccagcttctcgatagcaaccccggcttctgccagtggataa             <  4:322389‑M1/137‑137 (MQ=255)                                                                                                                                               |                                                                                                                                                    GCAAGTTGAAGCCGCTGGTGTCGCAGACTTATCCACTGGCAGAAGCCGGGGTTGCTATCGAGAAGCTGGGGCAACGGCAGGCTGTGGGTAAGTTGGTGGTGCTGGCCAGGTAAGGCAGTAGCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGCGACCGTGCAGGGTTTACCCGCGAAGAGGCCGGAACAGGTTGCTCACACTTCGCGCAGATTGTGGCAACGCCTGAATCGCGCTTCCAGGTTGCGATCGGGCATCTGGTGACTGCGCAGTGCATTCAAGGTCTGCTC  >  NC_002947/5943480‑5943769

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.