New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1579919	47 (0.830)	4 (0.080)	4/242	NT	8.3%	coding (1478/3153 nt)	ttgB	efflux pump membrane protein TtgB
	?	NC_002947	= 1579940	45 (0.850)					coding (1457/3153 nt)	ttgB	efflux pump membrane protein TtgB

GCACCTTGTTGCGCAAGATGGCGCCTACACTGCGCTCGTAGCCGTTGACGCTGCGGTCGAAGTTGCGGTTGAACCAGCCGAAGAAGCCACCTTTGGCGGTGTGGTGCTCGCCCTTCTTCAGCGGTTTGAGCATGGTTGCGCAGAGCGCCGGGGTGAAGATCAGCGCAACCAGCACCGACAGGCCCATGGCCGAGACGATGGTGATGGAGAACTGCCGGTAGATCACACCCGTGGAGCCGCCAAAGAACGCCATGGGCAGCAGTACGGCCGAGAGCACCAGGGCGATAC  >  NC_002947/1579779‑1580066                                                                                                                                             |                                                                                                                                                    gCACCTTGTTGCGCAAGATGGCGCCTACACTGCGCTCGTAGCCGTTGACGCTGCGGTCGAAGTTGCGGTTGAACCAGCCGAAGAAGCCACCTTTGGCGGTGTGGTGCTCGCCCTTCTTCAGCGGTTTGAGCATGGTTGCGCAGAgc                                                                                                                                                >  7:44294/1‑146 (MQ=255) gCACCTTGTTGCGCAAGATGGCGCCTACACTGCGCTCGTAGCCGTTGACGCTGCGGTCGAAGTTGCGGTTGAACCAGCCGAAGAAGCCACCTTTGGCGGTGTGGTGCTCGCCCTTCTTCAGCGGTTTGAGCATGGTTGCGCAGAgc                                                                                                                                                <  8:44294/146‑1 (MQ=255)     cTTGTTGCGCAAGATGGCGCCTACACTGCGCTCGTAGCCGTTGACGCTGCGGTCGAAGTTGCGGTTGAACCAGCCGAAGAAGCCACCTTTGGCGGTGTGGTGCTCGCCCTTCTTCAGCGGTTTGAGCATGGTTGCGCAGAGCGCCgg                                                                                                                                           <  8:192510/147‑1 (MQ=255)     cTTGTTGCGCAAGATGGCGCCTACACTGCGCTCGTAGCCGTTGACGCTGCGGTCGAAGTTGCGGTTGAACCAGCCGAAGAAGCCACCTTTGGCGGTGTGGTGCTCGCCCTTCTTCAGCGGTTTGAGCATGGTTGCGCAGAGCGCCgg                                                                                                                                           >  7:192510/1‑147 (MQ=255)         ttgCGCAAGATGGCGCCTACACTGCGCTCGTAGCCGTTGACGCTGCGGTCGAAGTTGCGGTTGAACCAGCCGAAGAAGCCACCTTTGGCGGTGTGGTGCTCGCCCTTCTTCAGCGGTTTGAGCATGGTTGCGCAGAGCGCCGGGGTGaa                                                                                                                                     <  7:41332/149‑1 (MQ=255)         ttgCGCAAGATGGCGCCTACACTGCGCTCGTAGCCGTTGACGCTGCGGTCGAAGTTGCGGTTGAACCAGCCGAAGAAGCCACCTTTGGCGGTGTGGTGCTCGCCCTTCTTCAGCGGTTTGAGCATGGTTGCGCAGAGCGCCGGGGTGaa                                                                                                                                     <  8:34967/149‑1 (MQ=255)                aGATGGCGCCTACACTGCGCTCGTAGCCGTTGACGCTGCGGTCGAAGTTGCGGTTGAACCAGCCGAAGAAGCCACCTTTGGCGGTGTGGTGCTCGCCCTTCTTCAGCGGTTTGAGCATGGTTGCGCAGAGCGCCGGGGTGAAGATCAgc                                                                                                                              >  3:170292‑M2/1‑147 (MQ=255)                    ggCGCCTACACTGCGCTCGTAGCCGTTGACGCTGCGGTCGAAGTTGCGGTTGAACCAGCCGAAGAAGCCACCTTTGGCGGTGTGGTGCTCGCCCTTCTTCAGCGGTTTGAGCATGGTTGCGCAGAGCGCCGGGGTGAAGATCAgcgcaa                                                                                                                          <  8:6487‑M2/149‑7 (MQ=255)                     gcgcCTACACTGCGCTCGTAGCCGTTGACGCTGCGGTCGAAGTTGCGGTTGAACCAGCCGAAGAAGCCACCTTTGGCGGTGTGGTGCTCGCCCTTCTTCAGCGGTTTGAGCATGGTTGCGCtgatcttcaccccggcgctctgcgcaac                                                                                                                         <  8:232861‑M1/149‑29 (MQ=255)                       gcCTACACTGCGCTCGTAGCCGTTGACGCTGCGGTCGAAGTTGCGGTTGAACCAGCCGAAGAAGCCACCTTTGGCGGTGTGGTGCTCGCCCTTCTTCAGCGGTTTGAGCATGGTTGCGCAGAGCGCCgggg                                                                                                                                         <  7:57219/131‑1 (MQ=255)                       gcCTACACTGCGCTCGTAGCCGTTGACGCTGCGGTCGAAGTTGCGGTTGAACCAGCCGAAGAAGCCACCTTTGGCGGTGTGGTGCTCGCCCTTCTTCAGCGGTTTGAGCATGGTTGCGCAGAGCGCCgggg                                                                                                                                         >  8:57219/1‑131 (MQ=255)                       gcCTACACTGCGCTCGTAGCCGTTGACGCTGCGGTCGAAGTTGCGGTTGAACCAGCCGAAGAAGCCACCTTTGGCGGTGTGGTGCTCGCCCTTCTTCAGCGGTTTGAGCAAGGTTGCGCAGAGCGCCGGGGTGAAGATCAgcgcaac                                                                                                                         <  3:279236‑M2/147‑8 (MQ=255)                        ccTACACTGCGCTCGTAGCCGTTGACGCTGCGGTCGAAGTTGCGGTTGAACCAGCCGAAGAAGCCACCTTTGGCGGTGTGGTGCTCGCCCTTCTTCAGCGGTTTGAGCATGGTAGCGCAGAGCGCCGGGGTGAAGATCAGCGCAACCAg                                                                                                                      >  4:283746/1‑149 (MQ=255)                          tACACTGCGCTCGTAGCCGTTGACGCTGCGGTCGAAGTTGCGGTTGAACCAGCCGAAGAAGCCACCTTTGGCGGTGTGGTGCTCGCCCTTCTTCAGCGGTTTGAGCATGGTTGCGCAGAGCGCCGGGGTGAAGATCa                                                                                                                                >  4:253398/1‑137 (MQ=255)                          tACACTGCGCTCGTAGCCGTTGACGCTGCGGTCGAAGTTGCGGTTGAACCAGCCGAAGAAGCCACCTTTGGCGGTGTGGTGCTCGCCCTTCTTCAGCGGTTTGAGCATGGTTGCGCAGAGCGCCGGGGTGAAGATCa                                                                                                                                <  3:253398/137‑1 (MQ=255)                            cacTGCGCTCGTAGCCGTTGACGCTGCGGTCGAAGTTGCGGTTGAACCAGCCGAAGAAGCCACCTTTGGCGGTGTGGTGCTCGCCCTTCTTCAGCGGTTTGAGCATGGTTGCGCtgatcttcaccccggcgctctgcgcaaccatgctc                                                                                                                  <  4:39236‑M1/149‑36 (MQ=255)                               tGCGCTCGTAGCCGTTGACGCTGCGGTCGAAGTTGCGGTTGAACCAGCCGAAGAAGCCACCTTTGGCGGTGTGGTGCTCGCCCTTCTTCAGCGGTTTGAGCATGGTTGCGCAGAGCGCCGGGGTGAAGATCAGCGCAACCAGCACCGa                                                                                                                >  2:297697/1‑148 (MQ=255)                               tGCGCTCGTAGCCGTTGACGCTGCGGTCGAAGTTGCGGTTGAACCAGCCGAAGAAGCCACCTTTGGCGGTGTGGTGCTCGCCCTTCTTCAGCGGTTTGAGCATGGTTGCGCAGAGCGCCGGGGTGAAGATCAGCGCAACCAGCACCGa                                                                                                                >  1:280121/1‑148 (MQ=255)                                       tAGCCGTTGACGCTGCGGTCGAAGTTGCGGTTGAACCAGCCGAAGAAGCCACCTTTGGCGGTGTGGTGCTCGCCCTTCTTCAGCGGTTTGAGCATGGTTGCGCAGAGCGCCGGGGTGAAGATCAGCGCAACCAGCACCGACAGGCCCAt                                                                                                       >  1:46186/1‑149 (MQ=255)                                       tAGCCGTTGACGCTGCGGTCGAAGTTGCGGTTGAACCAGCCGAAGAAGCCACCTTTGGCGGTGTGGTGCTCGCCCTTCTTCAGCGGTTTGAGCATGGTTGCGCAGAGCGCCGGGGTGAAGATCAGCGCAACCAGCACCGACAGGCCCAt                                                                                                       <  1:362431/149‑1 (MQ=255)                                           cGTTGACGCTGCGGTCGAAGTTGCGGTTGAACCAGCCGAAGAAGCCACCTTTGGCGGTGTGGTGCTCGCCCTTCTTCAGCGGTTTGAGCATGGTTGCGCAGAGCGCCGGGGTGAAGATCAGCGCAACCAGCACCGACAGGCCCATGGcc                                                                                                   <  2:46186/149‑1 (MQ=255)                                           cGTTGACGCTGCGGTCGAAGTTGCGGTTGAACCAGCCGAAGAAGCCACCTTTGGCGGTGTGGTGCTCGCCCTTCTTCAGCGGTTTGAGCATGGTTGCGCAGAGCGCCGGGGTGAAGATCAGCGCAACCAGCACCGACAGGCCCATGGc                                                                                                    <  3:44310/148‑1 (MQ=255)                                            gTTGACGCTGCGGTCGAAGTTGCGGTTGAACCAGCCGAAGAAGCCACCTTTGGCGGTGTGGTGCTCGCCCTTCTTCAGCGGTTTGAGCATGGTTGCGCAGAGCGCCGGGGTGAAGATCAGCGCAACCAGCACCGACAGGCCCATGGCCg                                                                                                  <  3:283746/149‑1 (MQ=255)                                             ttGACGCTGCGGTCGAAGTTGCGGTTGAACCAGCCGAAGAAGCCACCTTTGGCGGTGTGGTGCTCGCCCTTCTTCAGCGGTTTGAGCATGGTTGCGCAGAGCGCCGGGGTGAAGATCAGCGCAACCAGCACCGACAGGCCCATGGCCga                                                                                                 <  4:158080/149‑1 (MQ=255)                                                  gCTGCGGTCGAAGTTGCGGTTGAACCAGCCGAAGAAGCCACCTTTGGCGGTGTGGTGCTCGCCCTTCTTCAGCGGTTTGAGCATGGTTGCGCAGAGCGCCGGGGTGAAGATCAGCGCAACCAGCACCGACAGGCCCATGGCCGAGACGa                                                                                            <  1:342577/149‑1 (MQ=255)                                                  gCTGCGGTCGAAGTTGCGGTTGAACCAGCCGAAGAAGCCACCTTTGGCGGTGTGGTGCTCGCCCTTCTTCAGCGGTTTGAGCATGGTTGCGCAGAGCGCCGGGGTGAAGATCAGCGCAACCAGCACCGACAGGCCCATGGCCGAGACGa                                                                                            <  1:322777/149‑1 (MQ=255)                                                    tGCGGTCGAAGTTGCGGTTGAACCAGCCGAAGAAGCCACCTTTGGCGATGTGGTGCTCGCCCTTCTTCAGCGGTTTGAGCATGGTTGCGCAGAGCGCCGGGGTGAAGATCAGCGCAACCAGCACCGACAGGCCCATGGCCGAGACGATg                                                                                          >  1:266971/1‑149 (MQ=255)                                                                   ggTTGAACCAGCCGAAGAAGCCACCTTTGGCGGTGTGGTGCTCGCCCTTCTTCAGCGGTTTGAGCATGGTTGCGCAGAGCGCCGGGGTGAAGATCAGCGCAACCAGCACCGACAGGCCCATGGCCGAGACGATGGTGATGGAGAACTGc                                                                           <  4:283667/149‑1 (MQ=255)                                                                   ggTTGAACCAGCCGAAGAAGCCACCTTTGGCGGTGTGGTGCTCGCCCTTCTTCAGCGGTTTGAGCATGGTTGCGCAGAGCGCCGGGGTGAAGATCAGCGCAACCAGCACCGACAGGCCCATGGCCGAGACGATGGTGATGGAGAACTGc                                                                           <  7:6487/149‑1 (MQ=255)                                                                   ggTTGAACCAGCCGAAGAAGCCACCTTTGGCGGTGTGGTGCTCGCCCTTCTTCAGCGGTTTGAGCATGGTTGCGCAGAGCGCCGGGGTGAAGATCAGCGCAACCAGCACCGACAGGCCCATGGCCGAGACGATGGTGATGGAGAACTGc                                                                           <  2:280121/149‑1 (MQ=255)                                                                    gTTGAACCAGCCGAAGAAGCCACCTTTGGCGGTGTGGTGCTCGCCCTTCTTCAGCGGTTTGAGCATGGTTGCGCtgatcttcaccccggcgctctgcgcaaccatg                                                                                                                     >  5:150441‑M1/1‑74 (MQ=255)                                                                    gTTGAACCAGCCGAAGAAGCCACCTTTGGCGGTGTGGTGCTCGCCCTTCTTCAGCGGTTTGAGCATGGTTGCGCtgatcttcaccccggcgctctgcgcaaccatg                                                                                                                     <  6:150441‑M1/106‑33 (MQ=255)                                                                    gTTGAACCAGCCGAAGAAGCCACCTTTGGCGGTGTGGTGCTCGCCCTTCTTCAGCGGTTTGAGCATGGTTGCGCAGAGCGCCGGGGTGAAGATCAGCGCAACCAGCACCGACAGGCCCATGGCCGAGACGATGGTGATGGAGAACTGcc                                                                          >  1:148877/1‑149 (MQ=255)                                                                         aCCAGCCGAAGAAGCCACCTTTGGCGGTGTGGTGCTCGCCCTTCTTCAGCGGTTTGAGCATGGTTGCGCAGAGCGCCGGGGTGAAGATCAGCGCAACCAGCACCGACAGGCCCATGGCCGAGACGATGGTGATGGAGAACTGCCgg                                                                        >  6:333111/1‑146 (MQ=255)                                                                          ccAGCCGAAGAAGCCACCTTTGGCGGTGTGGTGCTCGCCCTTCTTCAGCGGTTTGAGCATGGTTGCGCAGAGCGCCGGGGTGAAGATCAGCGCAACCAGCACCGACAGGCCCATGGc                                                                                                    >  3:77203/1‑117 (MQ=255)                                                                          ccAGCCGAAGAAGCCACCTTTGGCGGTGTGGTGCTCGCCCTTCTTCAGCGGTTTGAGCATGGTTGCGCAGAGCGCCGGGGTGAAGATCAGCGCAACCAGCACCGACAGGCCCATGGc                                                                                                    <  4:77203/117‑1 (MQ=255)                                                                          ccAGCCGAAGAAGCCACCTTTGGCGGTGTGGTGCTCGCCCTTCTTCAGCGGTTTGAGCATGGTTGCGCAGAGCGCCGGGGTGAAGATCAGCGCAACCAGCACCGACAGGCCCATGGCCGAGACGATGGTGATGGAGAACTGCCgg                                                                        >  2:183592/1‑145 (MQ=255)                                                                             gCCGAAGAAGCCACCTTTGGCGGTGTGGTGCTCGCCCTTCTTCAGCGGTTTGAGCATGGTTGCGCAGAGCGCCGGGGTGAAGATCAGCGCAACCAGCACCGACAGGCCCATGGCCGAGACGATGGTGATGGAGAACTGCCGGTAGATca                                                                 <  4:279236/149‑1 (MQ=255)                                                                                 aagaagCCACCTTTGGCGGTGTGGTGCTCGCCCTTCTTCAGCGGTTTGAGCATGGTTGCGCAGAGCGCCGGGGTGAAGATCAGCGCAACCAGCACCGACAGGCCCATGGCCGAGACGATGGTGATGGAGAACTGCCGGTAGATCACAcc                                                             >  3:187912/1‑149 (MQ=255)                                                                                        cACCTTTGGCGGTGTGGTGCTCGCCCTTCTTCAGCGGTTTGAGCATGGTTGCGCAGAGCGCCGGGGTGAAGATCAGCGCAACCAGCACCGACAGGCCCATGGCCGAGACGATGGTGATGGAGAACTGCCGGTAGATCACACCCGTGGAg                                                      >  3:139063/1‑149 (MQ=255)                                                                                                       ggtgCTCGCCCTTCTTCAGCGGTTTGAGCATGGTTGCGCAGAGCGCCGGGGTGAAGATCAGCGCAACCAGCACCGACAGGCCCATGGCCGAGACGATGGTGATGGAGAACTGCCGGTAGATCACACCCGTGGAGCCGCCAAAGAACGc                                        >  6:295395/1‑148 (MQ=255)                                                                                                        gtgCTCGCCCTTCTTCAGCGGTTTGAGCATGGTTGCGCAGAGCGCCGGGGTGAAGATCAGCGCAACCAGCACCGACAGGCCCATGGCCGAGACGATGGTGATGGAGAACTGCCGGTAGATCACACCCGTGGAGCCGCCAAAGAACGCCa                                      <  2:266971/149‑1 (MQ=255)                                                                                                                 cttcttCAGCGGTTTGAGCATGGTTGCGCAGAGCGCCGGGGTGAAGATCAGCGCAACCAGCACCGACAGGCCCATGGCCGAGACGATGGTGATGGAGAACTGCCGGTAGATCACACCCGTGGAGCCGCCAAAGAACGCCATGGgcag                               >  4:232857/1‑147 (MQ=255)                                                                                                                         gCGGTTTGAGCATGGTTGCGCAGAGCGCCGGGGTGAAGATCAGCGCAACCAGCACCGACAGGCCCATGGCCGAGACGATGGTGATGGAGAACTGCCGGTAGATCACACCCGTGGAGCCGCCAAAGAACGCCATGGGCAGCAGTACGGcc                     >  5:151452/1‑149 (MQ=255)                                                                                                                             tttGAGCATGGTTGCGCAGAGCGCCGGGGTGAAGATCAGCGCAACCAGCACCGACAGGCCCATGGCCGAGACGATGGTGATGGAGAACTGCCGGTAGATCACACCCGTGGAGCCGCCAAAGACCGCCATGGGCAGCAGTACGGCCga                   >  8:66527/1‑147 (MQ=255)                                                                                                                                gAGCATGGTTGCGCAGAGCGCCGGGGTGAAGATCAgcgcaaccatgctcaaaccgctgaagaagggcgagcaccacaccgccaaaggtggcttcttcggctggttcaaccgcaacttcgaccgcagcgtcaacggctacgagcgcagtg              <  4:39236‑M2/149‑115 (MQ=255)                                                                                                                                 aGCATGGTTGCGCAGAGCGCCGGGGTGAAGATCAGCGCAACCAGCACCGACAGGCCCATGGCCGAGACGATGGTGATGGAGAACTGCCGGTAGATCACACCCGTGGAGCCGCCaaa                                              >  2:62115/1‑116 (MQ=255)                                                                                                                                  gCATGGTTGCGCAGAGCGCCGGGGTGAAGATCAGCGCAACCAGCACCGACAGGCCCATGGCCGAGACGATGGTGATGGAGAACTGCCGGTAGATCACACCCGTGGAGCCGCCAAAGAACGCCATGGGCAGCAGTACGGCCGAGAGCAc             >  8:25563/1‑148 (MQ=255)                                                                                                                                   cATGGTTGCGCAGAGCGCCGGGGTGAAGATCAgcgcaaccatgctcaaaccgctgaagaagggcgagcaccacaccgccaaaggtggcttcttcggctggttcaac                                                      >  5:150441‑M2/1‑32 (MQ=255)                                                                                                                                   cATGGTTGCGCAGAGCGCCGGGGTGAAGATCAgcgcaaccatgctcaaaccgctgaagaagggcgagcaccacaccgccaaaggtggcttcttcggctggttcaac                                                      <  6:150441‑M2/106‑75 (MQ=255)                                                                                                                                   cATGGTTGCGCAGAGCGCCGGGGTGAAGATCAGCGCAACCAGCACCGACAGGCCCATGGCCGAGACGATGGTGATGGAGAACTGCCGGTAGATCACACCCGTg                                                         >  7:144848/1‑103 (MQ=255)                                                                                                                                   cATGGTTGCGCAGAGCGCCGGGGTGAAGATCAGCGCAACCAGCACCGACAGGCCCATGGCCGAGACGATGGTGATGGAGAACTGCCGGTAGATCACACCCGTg                                                         <  8:144848/103‑1 (MQ=255)                                                                                                                                    aTGGTTGCGCAGAGCGCCGGGGTGAAGATCAGCGCAACCAGCACCGACAGGCCCATGGCCGAGACGATGGTGATGGAGAACTGCCgg                                                                        <  6:111125/87‑1 (MQ=255)                                                                                                                                    aTGGTTGCGCAGAGCGCCGGGGTGAAGATCAGCGCAACCAGCACCGACAGGCCCATGGCCGAGACGATGGTGATGGAGAACTGCCgg                                                                        >  5:111125/1‑87 (MQ=255)                                                                                                                                      ggTTGCGCAGAGCGCCGGGGTGAAGATCAGCGCAACCAGCACCGACAGGCCCATGGCCGAGACGATGGTGATGGAGAACTGCCGGTAGATCACACCCGTGGAGCCGCCAAAGAACGCCATGGGCAGCAGTACGGCCga                   >  2:186681/1‑138 (MQ=255)                                                                                                                                      ggTTGCGCAGAGCGCCGGGGTGAAGATCAGCGCAACCAGCACCGACAGGCCCATGGCCGAGACGATGGTGATGGAGAACTGCCGGTAGATCACACCCGTGGAGCCGCCAAAGAACGCCATGGGCAGCAGTACGGCCga                   <  1:186681/138‑1 (MQ=255)                                                                                                                                      ggTTGCGCAGAGCGCCGGGGTGAAGATCAGCGCAACCAGCACCGACAGGCCCATGGCCGAGACGATGGTGATGGAGAACTGCAGGTAGATCACACCCGTGGAGCCGCCAAAGAACGCCATGGGCAGCAGTACGGCCGAGAGCACCAggg        >  2:243394/1‑149 (MQ=255)                                                                                                                                       gTTGCGCtgatcttcaccccggcgctctgcgcaaccttgctcaaaccgctgaagaagggcgagcaccacaccgccaaaggtggcttcttcggctggttcaaccgcaacttcgaccgcagcgtcaacggctacgagcgcagtgtaggc         <  3:279236‑M1/147‑141 (MQ=255)                                                                                                                                       gTTGCGCAGAGCGCCGGGGTGAAGATCAgcgcaaccatgctcaaaccgctgaagaagggcgagcaccacaccgccaaaggtggcttcttcggctggttcaaccgcaacttcgaccgcagcgtcaacggctacgagcgcagtgtaggcgc       <  8:232861‑M2/149‑122 (MQ=255)                                                                                                                                       gTTGCGCAGAGCGCCGGGGTGAAGATCAGCGCAACCAGCACCGACAGGCCCATGGCCGAGACGATGGTGATGGAGAACTGCCGGTAGATCACACCCGTGGAGCCGCCAAAGAACGCCATGGGCAGCAGTACGGCCGAGAGCACCAggg        <  5:333111/148‑1 (MQ=255)                                                                                                                                       gTTGCGCAGAGCGCCGGGGTGAAGATCAGCGCAACCAGCACCGACAGGCCCATGGCCGAGACGATGGTGATGGAGAACTGCCGGTAGATCACACCCGTGGAGCCGCCAAAGAACGCCATGGGCAGCAGTACGGCCGAGAGCACCAGGGc       <  1:183592/149‑1 (MQ=255)                                                                                                                                        ttGCGCtgatcttcaccccggcgctctgcgcaaccatgctcaaaccgctgaagaagggcgagcaccacaccgccaaaggtggcttcttcggctggttcaaccgcaacttcgaccgcagcgtcaacggctacgagcgcagtgtaggcgcc      <  8:6487‑M1/149‑144 (MQ=255)                                                                                                                                          gcgcAGAGCGCCGGGGTGAAGATCAGCGCAACCAGCACCGACAGGCCCATGGCCGAGACGATGGTGATGGAGAACTGCCGGTAGATCACACCCGTGGAGCCGCCAAAGAACGCCATGGGCAGCAGTACGGCCGAGAGCACCAGGGCGa     <  2:148877/148‑1 (MQ=255)                                                                                                                                            gctgatcttcaccccggcgctctgcgcaaccatgctcaaaccgctgaagaagggcgagcaccacaccgccaaaggtggcttcttcggctggttcaaccgcaacttcgaccgcagcgtcaacggctacgagcgcagtgtaggcgccatct  >  3:170292‑M1/1‑2 (MQ=255)                                                                                                                                             |                                                                                                                                                    GCACCTTGTTGCGCAAGATGGCGCCTACACTGCGCTCGTAGCCGTTGACGCTGCGGTCGAAGTTGCGGTTGAACCAGCCGAAGAAGCCACCTTTGGCGGTGTGGTGCTCGCCCTTCTTCAGCGGTTTGAGCATGGTTGCGCAGAGCGCCGGGGTGAAGATCAGCGCAACCAGCACCGACAGGCCCATGGCCGAGACGATGGTGATGGAGAACTGCCGGTAGATCACACCCGTGGAGCCGCCAAAGAACGCCATGGGCAGCAGTACGGCCGAGAGCACCAGGGCGATAC  >  NC_002947/1579779‑1580066

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.