New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3214224	49 (0.860)	3 (0.060)	3/248	NT	5.9%	coding (139/3129 nt)	mexD	multidrug RND transporter MexD
	?	NC_002947	= 3214263	49 (0.910)					coding (178/3129 nt)	mexD	multidrug RND transporter MexD

AGTGAGATGTCCAGGTTCTTCATCCATCGCCCGAACTTCGCCTGGGTCGTGGCGTTGTTCATTTCACTGGCCGGTTTGCTGGTGATTCCATCCTTGCCCGTGGCCCAGTACCCCAACGTGGCGCCACCGCAGATCTCCATCACCGCCTCCTACCCCGGCG‑CTTCGGCCAAGGTCATGGTGGAGTCGGTGACCAGCATCATCGAACAGTCGCTCAACGGCGCCAAGGGCCTGCTGTACTACGAGTCCACCAACAACTCCAACGGCGTGGCCGAAGTGATGGTGACCTTCGAGCC  >  NC_002947/3214080‑3214372                                                                                                                                                 |                                                                                                                                                      aGTGAGATGTCCAGGTTCTTCATCCATCGCCCGAACTTCGCCTGGGTCGTGGCGTTGTTCATTTCACTGGCCGGTTTGCTGGTGATTCCATCCTTGCCCGTGGCCCAGTACCCCAACTTGGCGCCACCGCAGATCTCCATCACCGcctc                                                                                                                                                   <  4:102278/149‑1 (MQ=255)   tGAGATGTCCAGGTTCTTCATCCATCGCCCGAACTTCGCCTGGGTCGTGGCGTTGTTCATTTCACTGGCCGGTTTGCTGGTGATTCCATCCTTGCCCGTGGCCCAGTACCCCAACGTGGCGCCACCGCAGATCTCCATCACCGcctcc                                                                                                                                                  >  4:155632/1‑148 (MQ=255)         gTCCAGGTTCTTCATCCATCGGCCGATCTTCGCCTGGGTCGTGGCGTTGTTCATTTCACTGGCCGGTGTGCTGGTGATTGCATCCTTGCGCTTGGCTGTGTACAATTATTTGGCGCGATCGCAGATCTACATCACCGACTCCTAgccc                                                                                                                                            <  8:270129/148‑1 (MQ=255)         gTCCAGGTTCTTCATCCATCGCCCGAACTTCGCCTGGGTCGTGGCGTTGTTCATTTCACTGGCCGGTTTGCTGGTGATTCCATCCTTGCCCGTGGCCCAGTACCCCAACGTGGCGCCACCGCAGATCTCCATCACCGCCTCCTACCCCg                                                                                                                                           >  3:25581/1‑149 (MQ=255)            cAGGTTCTTCATCCATCGCCCGAACTTCGCCTGGGTCGTGGCGTTGTTCATTTCACTGGCCGGTTTGCTGGTGATTCCATCCTTGCCCGTGGCCCAGTACCCCAACGTGGCGCCACCGCAGATCTCCATCACCGCCTCCTACCCCGgcg                                                                                                                                        >  5:252527/1‑149 (MQ=255)                       tccatcGCCCGAACTTCGCCTGGGTCGTGGCGTTGTTCATTTCACTGGCCGGTTTGCTGGTGATTCCATCCTTGCCCGTGGCCCAGTACCCCAACGTGGCGCCACCGCAGATCTCCATCACCGCCTCCTACCCCGGCG‑CTTCGGCCAAg                                                                                                                            >  6:215166/1‑149 (MQ=255)                          atcGCCCGAACTTCGCCTGGGTCGTGGCGTTGTTCATTTCACTGGCCGGTTTGCTGGTGATTCCATCCTTGCCCGTGGCCCAGTACCCCAACGTGGCGCCACCGCAGATCTCCATCACCGCCTCCTACCCCGGCG‑CTTCGGCCAAGGt                                                                                                                          >  6:205516/1‑148 (MQ=255)                              cccGAACTTCGCCTGGGTCGTGGCGTTGTTCATTTCACTGGCCGGTTTGCTGGTGATTCCATCCTTGCCCGTGGCCCAGTACCCCAACGTGGCGCCACCGCAGATCTCCATCACCGCCTCCTAcc                                                                                                                                              >  6:7983/1‑125 (MQ=255)                                     ttCGCCTGGGTCGTGGCGTTGTTCATTTCACTGGCCGGTTTGCTGGTGATTCCATCCTTGCCCGTGGCCCAGTACCCCAACGTGGCGCCACCGCAGATCTCCATCACCGactccaccatgaccttggccgaagcgccggggtaggaggc                                                                                                               >  5:232644‑M1/1‑109 (MQ=255)                                         ccTGGGTCGTGGCGTTGTTCATTTCACTGGCCGGTTTGCTGGTGATTCCATCCTTGCCCGTGGCCCAGTACCCCAACGTGGCGCCACCGCAGATCTCCATCACCGCCTCCTACCCCGGCG‑CTTCGGCCAAGGTCATGGTGGAGTcggtg                                                                                                          >  5:205516‑M2/1‑144 (MQ=255)                                          cTGGGTCGTGGCGTTGTTCATTTCACTGGCCGGTTTGCTGGTGATTCCATCCTTGCCCGTGGCCCAGTACCCCAACGTGGCGCCACCGCAGATCTCCATCACCGCCTCCTACCCCGGCG‑CTTCGGCCAAGGTCATGGTGGAGTcggtga                                                                                                         >  4:25581‑M2/1‑143 (MQ=255)                                          cTGGGTCGTGGCGTTGTTCATTTCACTGGCCGGTTTGCTGGTGATTCCATCCTTGCCCGTGGCAGATTAAACCAAAGTGGCGCCAACGCAGATCTCCATCACCGactccaccatgaccttggccgaagcgccggggtaggaggcggtga                                                                                                          <  6:95771‑M1/149‑46 (MQ=255)                                            gggTCGTGGCGTTGTTCATTTCACTGGCCGGTTTGCTGGTGATTCCATCCTTGCCCGTGGCCCAGTACCCCAACGTGGCGCCACCGCAGATCTCCATCACCGCCTCCTACCCCGGCG‑CTTCGGCCAAGGTCATGGTGGAGTCGGTGAc                                                                                                        >  6:71236/1‑148 (MQ=255)                                             ggTCGTGGCGTTGTTCATTTCACTGGCCGGTTTGCTGGTGATTCCATCCTTGCCCGTGGCGCAGTTCTCCAACGTGGCGCCACCGCAGATCTCCATCACCGCCTCCTACCCCGGCG‑CTTCGGCCAAGGTCATGGTGGAGTCGGTGACCa                                                                                                      <  2:285736/149‑1 (MQ=255)                                             ggTCGTGGCGTTGTTCATTTCACTGGCCGGTTTGCTGGTGATTCCATCCTTGCCCGTGGCCCAGTACCCCAACGTGGCGCCACCGCAGATCTCCATCACCGactccaccatgaccttggccgaagcgccggggtaggaggcggtgatg                                                                                                        <  6:232644‑M1/148‑48 (MQ=255)                                             ggTCGTGGCGTTGTTCATTTCACTGGCCGGTTTGCTGGTGATTCCATCCTTGCCCGTGGCCCAGTACCCCAACGTGGCGCCACCGCAGATCTCCATCACCGCCTCCTACCCCGGCG‑CTTCGGCCAAGGTCATGGTGGAGTCGGTGACCa                                                                                                      <  6:98479/149‑1 (MQ=255)                                                     cGTTGTTCATTTCACTGGCCGGGTTGCTGGTGATTCCATCCTTGCCCGTGGCCCAGTACCCCAACGTGGCGCCACCGCAGATCTCCATCACCGCCTCCTACCCCGGCG‑CTTCGGCCAAGGTCATGGTGGAGTCGGTGACCAGCatcatc                                                                                              <  2:129900/149‑1 (MQ=255)                                                         gttCATTTCACTGGCCGGTTTGCTGGTGATTCCATCCTTGCCCGTGGCCCAGTACCCCAACGTGGCGCCACCGCAGATCTCCATCACCGCCTCCTACCCCGGCG‑CTTCGGCCAAGGTCATGGTGGAGTCGGTGACCAGCATCATCGaa                                                                                           <  2:122680/148‑1 (MQ=255)                                                         gttCATTTCACTGGCCGGTTTGCTGGTGATTCCATCCTTGCCCGTGGCCCAGTACCCCAACGTGGCGCCACCGCAGATCTCCATCACCGCCTCCTACCCCGGCG‑CTTCGGCCAAGGTCATGGTGGAGTCGGTGACCAGCATCATCGaa                                                                                           >  6:154714/1‑148 (MQ=255)                                                          ttCATTTCACTGGCCGGTTTGCTGGTGATTCCATCCTTGCCCGTGGCCCAGTACCCCAACGTGGCGCCACCGCAGATCTCCATCACCGCCTCCTACCCCGGCG‑CTTCGGCCAAGGTCATGGTGGAGTCGGTGACCAGCATCATCGaa                                                                                           >  5:62664/1‑147 (MQ=255)                                                          ttCATTTCACTGGCCGGTTTGCTGGTGATTCCATCCTTGCCCGTGGCCCAGTACCCCAACGTGGCGCCACCGCAGATCTCCATCACCGCCTCCTACCCCGGCG‑CTTCGGCCAAGGTCATGGTGGAGTCGGTGACCAGCATCATCGAACa                                                                                         <  1:347114/149‑1 (MQ=255)                                                            cATTTCACTGGCCGGTTTGCTGGTGATTCCATCCTTGCCCGTGGCCCAGTACCCCAACGTGGCGCCACCGCAGATCTCCATCACCGCCTCCTACCCCGGCG‑CTTCGGCCAAGGTCATGGTGGAGTCGGTGACCAGCATCATCGAACAGt                                                                                       >  6:130063/1‑149 (MQ=255)                                                              tttCACTGGCCGGTTTGCTGGTGATTCCATCCTTGCCCGTGGCCCAGTACCCCAACGTGGCGCCACCGCAGATCTCCATCACCGCCTCCTACCCCGGCG‑CTTCGGCCAAGGTCATGGTGGAGTCGGTGACCAGCATCATCGAACAGTCg                                                                                     >  7:145055/1‑149 (MQ=255)                                                              tttCACTGGCCGGTTTGCTGGTGATTCCATCCTTGCCCGTGGCCCAGTACCCCAACGTGGCGCCACCGCAGATCTCCATCACCGCCTCCTACCCCGGCG‑CTTCGGCCAAGGTCATGGTGGAGTCGGTGACCAGCATCATCGAACAGTCg                                                                                     >  3:27195/1‑149 (MQ=255)                                                                    tGGCCGGTTTGCTGGTGATTCCATCCTTGCCCGTGGCTCAGTACCCCAACGTGGCGCCACCGCAGATCTCCATCACCGCCTCCTACCCCGGCG‑CTTCGGCCAAGGTCATGGTGGAGTCGGTGACAAGAATCATCGAACAGTCGCTCAAc                                                                               >  3:237354/1‑149 (MQ=255)                                                                      gCCGGTGTGCTGGTGATTCCTTCCTTGACAGTTGCCCATTACCCCAACGTGGCGCCACCTCAGATCTCCATCACCGCCTCCTAACCCGGCG‑CTTCGGCCAAGGTCATGGTTGAGTCGGTGACCAGCATCATCGAACAGTCGCTCAACg                                                                              <  8:152055/148‑1 (MQ=255)                                                                             tccTGGTGATTCCATCCTTGCCCGTGTTCAATTACACCTAACTGGCGACAACGGAGATCTCCATCACCGCCTCCTACCCCGGCG‑CTTCGGCCAAGGTCATGGTGGAGTCGGTGACCAGCATCATCGAACAGTCGCTCAACGGCGCCaa                                                                       <  2:28974/146‑1 (MQ=255)                                                                             tGCTGGTGATTCCATCCTTGCCCGTGGCCCAGTACCCCAACGTGGCGCCACCGCAGATCTCCATCACCGCCTCCTACCCCGGCG‑CTTCGGCCAAGGTCATGGTGGAGTCGGTGACCAGCATCATCGAACAGTCGCTCAACGGCGCCaa                                                                       <  5:71236/148‑1 (MQ=255)                                                                                tGGTGATTCCATCCTTGCCCGTGGCCCAGTACCCCAACGTGGCGCCACCGCAGAACTCCATCACCGCCTCCTACCCCGGCG‑CTTCGGCCAAGGTCATGGTGGAGTCGGTGACCAGCATCATCGAACa                                                                                         <  8:168782/127‑1 (MQ=255)                                                                                tGGTGATTCCATCCTTGCCCGTGGCCCAGTACCCCAACGTGGCGCCACCGCAGAACTCCATCACCGCCTCCTACCCCGGCG‑CTTCGGCCAAGGTCATGGTGGAGTCGGTGACCAGCATCATCGAACa                                                                                         >  7:168782/1‑127 (MQ=255)                                                                                  gTGATTCCATCCTTGCCCGTGGCCCAGTACCCCAACGTGGCGCCACCGCAGATCTCCATCACCGCCTCCTACCCCGGCG‑CTTCGGCCAAGGTCATGGTGGAGTCGGTGACCAGCATCATCGAACAGTCGCTCAACGGCGCCAAGGGCct                                                                 >  8:265785/1‑149 (MQ=255)                                                                                   tgtttCCAGCCTTGCCCGTGTCCCAGTACCCCCACGTGGCGCCACCGCAGATCTCCATCACCGCCTCCTACCCCGGCG‑CTTCGGCCAAGGTCATGGTGGAGTCGGTGACCAGCATCATCGAACAGTCGCTCAACGGCGCCAAGGGCctg                                                                <  6:252527/146‑1 (MQ=255)                                                                                     aTTCCATCCTTGCCCGTGGCCCAGTACCCCAACGTGGCGCCACCGCAGATCTCCATCACCGCCTCCTACCCCGGCG‑CTTCGGCCAAGGTCATGGTGGAGTCGGTGACCAGCATCATCGAACAGTCGCTCAACGGCGCCAAGGGCctgct                                                              <  3:289415/149‑1 (MQ=255)                                                                                      ttCCATCCTTGCCCGTGGCCCAGTACCCCAACGTGGCGCCACCGCAGATCTCCATCACCGCCTCCTACCCCGGCG‑CTTCGGCCAAGGTCATGGTGGAGTCGGTGACCAGCATCATCGAACAGTCGCTCAACGGCGCCAAGGGCctgctg                                                             <  5:154714/149‑1 (MQ=255)                                                                                             cTTGCCCGTGGCCCAGTACCCCAACGTGGCGCCACCGCAGATCTCCATCACCGCCTCCTACCCCGGCG‑CTTCGGCCAAGGTCATGGTGGAGTCGGTGACCAGCATCATCGAACAGTCGCTCAACGGCGCCAAGGGCCTGCTGtactac                                                       <  8:145055/148‑1 (MQ=255)                                                                                              ttGCCCGTGGCCCAGTACCCCAACGTGGCGCCACCGCAGATCTCCATCACCGCCTCCTACCCCGGCG‑CTTCGGCCAAGGTCATGGTGGAGTCGGTGACCAGCATCATCGAACAGTCGCTCAACGGCGCCAAGGGCCTGCTGtactac                                                       >  4:25770/1‑147 (MQ=255)                                                                                                gCCCGTGGCCCAGTACCCCAACGTGGCGCCACCGCAGATCTCCATCACCGCCTCCTACCCCGGCG‑CTTCGGCCAAGGTCATGGTGGAGTCGGTGACCAGCATCATCGAACAGTCGCTCAACGGCGCCAAGGGCCTGCTGTACTACGAg                                                    <  6:62664/148‑1 (MQ=255)                                                                                                        cccAGTACCCCAACGTGGCGCCACCGCAGATCTCCATCACCGCCTCCTACCCCGGCG‑CTTCGGCCAAGGTCATGGTGGAGTCGGTGACCAGCATCATCGAACAGTCGCTCAACGGCGCCAAGGGCCTGCTGTACTACGAGTCCACcaa                                            >  2:13347/1‑148 (MQ=255)                                                                                                         ccAGTACCCCAACGTGGCGCCACCGCAGATCTCCATCACCGCCTCCTACCCCGGCG‑CTTCGGCCAAGGTCATGGTGGAGTCGGTGACCAGCATCATCGAACAGTCGCTCAACGGCGCCAAGGGCCTGCTGtactac                                                       <  1:209496/136‑1 (MQ=255)                                                                                                         ccAGTACCCCAACGTGGCGCCACCGCAGATCTCCATCACCGCCTCCTACCCCGGCG‑CTTCGGCCAAGGTCATGGTGGAGTCGGTGACCAGCATCATCGAACAGTCGCTCAACGGCGCCAAGGGCCTGCTGtactac                                                       >  2:209496/1‑136 (MQ=255)                                                                                                           aGTACCCCAACGTGGCGCCACCGCAGATCTCCATCACCGCCTCCTACCCCGGCG‑CTTCGGCCAAGGTCATGGTGGAGTCGGTGACCAGCATCATCGAACAGTCGCTCAACGGCGCCAAGGGCCTGCTGTACTACGAGTCCACCaacaac                                        <  5:104704/149‑1 (MQ=255)                                                                                                           aGTACCCCAACGTGGCGCCACCGCAGATCTCCATCACCGCCTCCTACCCCGGCG‑CTTCGGCCAAGGTCATGGTGGAGTCGGTGACCAGCATCATCGAACAGTCGCTCAACGGCGCCAAGGGCCTGCTGTACTACGAGTCCACCaacaac                                        <  5:215166/149‑1 (MQ=255)                                                                                                                cccAACGTGGCGCCACCGCAGATCTCCATCACCGCCTCCTACCCCGGCGTCTTCGGCCAAGGTCATGGTGGAGTCGGTGACCAGCATCATCGAACAGTCGCTCAACGGCGCCAAGGGCCTGCTGTACTACGAGTCCACCAACAACTcc                                     >  1:266362/1‑148 (MQ=255)                                                                                                                       tGGCGCCACCGCAGATCTCCATCACCGCCTCCTACCCCGGCG‑CTTCGGCCAAGGTCATGGTGGAGTCGGTGACCAGCATCATCGAACAGTCGCTCAACGGCGCCAAGGGCCTGCTGTACTACGAGTCCACCAACAACTCCAACGGCGTg                            <  5:130063/149‑1 (MQ=255)                                                                                                                        ggCGCCACCGCAGATCTCCATCACCGCCTCCTACCCCGGCG‑CTTCGGCCAAGGTCATGGTGGAGTCGGTGACCAGCATCATCGAACAGTCGCTCAACGGCGCCAAGGGCCTGCTGTACTACGAGTcc                                                 >  4:216824/1‑127 (MQ=255)                                                                                                                               ccGCAGATCTCCATCACCGCCTCCTACCCCGGCG‑CTTCGGCCAAGGTCATGGTGGAGTCGGTGACCAGCATCATCGAACAGTCGCTCAACGGCGCCAAGGGCCTGCTGTACTACGAGTCCACCAACAACTCCAACGGCGTGGCCGAAGt                    <  5:143828/149‑1 (MQ=255)                                                                                                                               ccGCAGATCTCCATCACCGCCTCCTACCCCGGCG‑CTTCGGCCAAGGTCATGGTGGAGTCGGTGACCAGCATCATCGAACAGTCGCTCAACGGCGCCAAGGGCCTGCTGTACTACGAGTCCACCAACAACTCCAACGGCGTGGCCGAAGt                    <  4:27195/149‑1 (MQ=255)                                                                                                                                 gCAGATCTCCATCACCGCCTCCTACCCCGGCG‑CTTCGGCCAAGGTCATGGTGGAGTCGGTGACCAGCATCATCGAACAGTCGCTCAACGGCGCCAAGGGCCTGCTGTACTACGAGTCCACCAACAACTCCAACGGCGTGGCCGAAGTGa                  <  7:265785/149‑1 (MQ=255)                                                                                                                                   aGATCTCCATCACCGCCTCCTACCCCGGCG‑CTTCGGCCAAGGTCATGGTGGAGTCGGTGACCAGCATCATCGAACAGTCGCTCAACGGCGCCAAGGGCCTGCTGTACTACGAGTCCACCAACAACTCCAACGGCGTGGCCGAAGTGATg                <  3:25770/149‑1 (MQ=255)                                                                                                                                      tctcCATCACCGCCTCCTACCCCGGCG‑CTTCGGCCAAGGTCATGGTGGAGTCGGTGACCAGCATCATCGAACAGTCGCTCAACGGCGCCAAGGGCCTGCTGTACTACGAGTCCACCAACAACTCCAACGGCGt                             >  6:7573/1‑133 (MQ=255)                                                                                                                                      tctcCATCACCGCCTCCTACCCCGGCG‑CTTCGGCCAAGGTCATGGTGGAGTCGGTGACCAGCATCATCGAACAGTCGCTCAACGGCGCCAAGGGCCTGCTGTACTACGAGTCCACCAACAACTCCAACGGCGt                             <  5:7573/133‑1 (MQ=255)                                                                                                                                       ctcCATCACCGCCTCCTACCCCGGCG‑CTTCGGCCAAGGTCATGGTGGAGTCGGTGACCAGCATCATCGAACAGTCGCTCAACGGCGCCAAGGGCCTGCTGTACTACGAGTCCACCAACAACTCCAACGGCGTGGCCGAAGTGATGGTGa            >  3:7160/1‑149 (MQ=255)                                                                                                                                        tcCATCACCGCCTCCTACCCCGGCG‑CTTCGGCCAAGGTCATGGTGGAGTCGGTGACCAGCATCATCGAACAGTCGCTCAACGGCGCCAAGGGCCTGCTGTACTACGAGTCCACCAACAACTCCAACGGCGTGGCCGAAGTGAt                 >  6:132757/1‑143 (MQ=255)                                                                                                                                        tcCATCACCGCCTCCTACCCCGGCG‑CTTCGGCCAAGGTCATGGTGGAGTCGGTGACCAGCATCATCGAACAGTCGCTCAACGGCGCCAAGGGCCTGCTGTACTACGAGTCCACCAACAACTCCAACGGCGTGGCCGAAGTGAt                 <  5:132757/143‑1 (MQ=255)                                                                                                                                          cATCACCGCCTCCTACCCCGGCG‑CTTCGGCCAAGGTCATGGTGGAGTcggtgatggagatctgcggtggcgccacgttggggtactgggccacgggcaaggatggaatcaccagcaaaccggccagtgaaatgaacaacgccacgacc          <  6:232644‑M2/148‑102 (MQ=255)                                                                                                                                          cATCACCGCCTCCTACCCCGGCG‑CTTCGGCCAAGGTCATGGTGGAGTCGGTGACCAGCATCATCGAACAGTCGCTCAACGGCGCCAAGGGCCTGCTGTACTACGAGTCCACCAACAACTCCAACGGCGTGGCCGAAGTGATGGTGACCt         >  4:316901/1‑149 (MQ=255)                                                                                                                                           aTCACCGCCTCCTACCCCGGAG‑CTTCGGCCAAGGTCATGGTGGAGTCGGTGACCAGCATCATCGAACAGTCGCTCAACGGCGCCAAGGGCCTGCTGTACTACGAGTCAACCAACAACTCCAACGGCGTGGCCGAAGTGATGGTGACCtt        >  1:313074/1‑149 (MQ=255)                                                                                                                                            tCACCGactccaccatgaccttggccgaagcgccggggtaggaggcggtgatggagatctgcggtggcgccacgttggggtactgggccacgggcaaggatggaatcaccagcaaaccggccagtgaaatgaacaacgccacgacccag        >  4:25581‑M1/1‑6 (MQ=255)                                                                                                                                            tCACCGCCTCCTACCCCGGCG‑CTTCGGCCAAGGTCATGGTGGAGTcggtgatggagatctgcgttggcgccactttggtttaatctgccacgggcaaggatggaatcaccagcaaaccggccagtgaaatgaacaacgccacgacccag       <  6:95771‑M2/149‑105 (MQ=255)                                                                                                                                             cACCGactccaccatgaccttggccgaagcgccggggtaggaggcggtgatggagatctgcggtggcgccacgttggggtactgggccacgggcaaggatggaatcaccagcaaaccggccagtgaaatgaacaacgccacgacccagg       >  5:205516‑M1/1‑5 (MQ=255)                                                                                                                                              aCCGCCTCCTACCCCGGCG‑CTTCGGACAAGGTCATGGTGGAGTCGGTGACCAGCATCATCGAACAGTCGCTCAACGGCGCCAAGGGCCTGCTGTACTACGAGTCCACCAACAACTCGAACGGCGTGGCCTAAGTGATGGTGACCTTCGa     <  4:237354/149‑1 (MQ=255)                                                                                                                                                 gCCTCCTACCCCGGCG‑CTTCGGCCAAGGTCATGGTGGAGTcggtgatggagatctgcggtggcgccacgttggggtactgggccacgggcaaggatggaatcaccagcaaaccggccagtgaaatgaacaacgccacgacccaggcgaa  >  5:232644‑M2/1‑40 (MQ=255)                                                                                                                                                 |                                                                                                                                                      AGTGAGATGTCCAGGTTCTTCATCCATCGCCCGAACTTCGCCTGGGTCGTGGCGTTGTTCATTTCACTGGCCGGTTTGCTGGTGATTCCATCCTTGCCCGTGGCCCAGTACCCCAACGTGGCGCCACCGCAGATCTCCATCACCGCCTCCTACCCCGGCG‑CTTCGGCCAAGGTCATGGTGGAGTCGGTGACCAGCATCATCGAACAGTCGCTCAACGGCGCCAAGGGCCTGCTGTACTACGAGTCCACCAACAACTCCAACGGCGTGGCCGAAGTGATGGTGACCTTCGAGCC  >  NC_002947/3214080‑3214372

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.