New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 385247648 (0.850)6 (0.110) 5/242 NT 10.9% intergenic (+22/‑137) PP_3399/alkB minor curlin subunit CsgB/alpha‑ketoglutarate‑ and Fe(II)‑dependent dioxygenase
?NC_002947 = 3852493 53 (1.010)intergenic (+39/‑120) PP_3399/alkB minor curlin subunit CsgB/alpha‑ketoglutarate‑ and Fe(II)‑dependent dioxygenase

CGTCGCCTACGTGACCCAGGGAGGCCAAAGCAACAAGGCGTTCGTCGACCAGAGTGGTGTCGCCCAATCCGCCACCATCACCCAGCTGGGCAGCGCGAACCTGGCCACTGTGACCCAGCAGTAAACCGCTCCCCCTTGAACCGCGGTGCTCCTCTCCCTGGTGCCGCGGTTCCTTTTTCTGTCATCCCGCCCTCTGCCATCGTTCGATCCGGCCGGCGCGTGTAATCCCCTGACGTGTAGCTGTCGGGTACAATGGCAAACCGCTCGAAGATGTGCAGCCACATGATCCAGTCC  >  NC_002947/3852331‑3852624
                                                                                                                                                 |                                                                                                                                                    
cGTCGCCTACGTGACCCAGGGAGGCCAAAGCAACAAGGCGTTCGTCGACCAGAGTGGTGTCGCCCAATCCGCCACCATCACCCAGCTGGGCAGCGCGAACCTGGCCACTGTGACCCAGCAGTAAACCGCTCCCCCTTGAACCGCGGTGc                                                                                                                                                   <  4:115474/149‑1 (MQ=255)
  tCGCCTACGTGACCCAGGGAGGCCAAAGCAACAAGGCGTTCGTCGACCAGAGTGGTGTCGCCCAATCCGCCACCATCACCCAGCTGGGCAGCGCGAACCTGGCCACTGTGACCCAGCAGTAAACCGCTCCCCCTTGAACCGCGGTGctc                                                                                                                                                 >  2:151198/1‑149 (MQ=255)
      cTACGTGACCCAGGGAGGCCAAAGCAACAAGGCGTTCGTCGACCAGAGTGGTGTCGCCCAATCCGCCACCATCACCCAGCTGGGCAGCGCGAACCTGGCCACTGTGACCCAGCAGTAAACCGCTCCCCCTTGAACCGCGGTGCTCctct                                                                                                                                             >  6:187136/1‑149 (MQ=255)
         cGTGACCCAGGGAGGCCAAAGCAACAAGGCGTTCGTCGACCAGAGTGGTGTCGCCCAATCCGCCACCATCACCCAGCTGGGCAGCGCGAACCTGGCCACTGTGACCCAGCAGTAAACCGCTCCCCCTTGAACCGCGGTGCTCCTCTccc                                                                                                                                          <  5:94152/149‑1 (MQ=255)
               ccAGGGAGGCCAAAGCAACAAGGCGTTCGTCGACCAGAGTGGTGTCGCCCAATCCGCCACCATCACCCAGCTGGGCAGCGCGAACCTGGCCACTGTGACCCAGCAGTAAACCGCTCCCCCTTGAACCGCGGcaccagggagaggagcac                                                                                                                                    >  4:54245‑M1/1‑131 (MQ=255)
                         cAAAGCAACAAGGCGTTCGTCGACCAGAGTGGTGTCGCCCAATCCGCCACCATCACCCAGCTGGGCAGCGCGAACCTGGCCACTGTGACCCAGCAGTAAACCGCTCCCCCTTGAACCGCGGcaccagggagaggagcaccgcggttcaa                                                                                                                          <  3:54245‑M1/149‑29 (MQ=255)
                                acaaGGCGTTCGTCGACCAGAGTGGTGTCGCCCAATCCGCCACCATCACCCAGCTGGGCAGCGCGAACCTGGCCACTGTGACCCAGCAGTAAACCGCTCCCCCTTGAACCGCGGTGCTCCTCTCCCTGGTGCCACGGTTCCTTTTTCTg                                                                                                                   <  1:151198/149‑1 (MQ=255)
                                 ataGGCGTGCGACGAGCAGAGTTGTTTCGCCCAAGAGGCCCCCATCACCCAGCTGCGCAGCGCGAACCTGGCCACTGTGACCCAGCAGTAAACCGCTCCCCCTTGAACCGCGGTGCTCCTCTCCCTGGTGCCGCGGTTCCTTTTTCt                                                                                                                    <  4:215297/145‑1 (MQ=255)
                                           gtcgACCAGAGTGGTGTCGCCCAATCCGCCACCATCACCCAGCTGGGCAGCGCGAACCTGGCCACTGTGACCCAGCAGTAAACCGCTCCCCCTTGAACCGCGGTGCTCCTCTCCCTGGTGCCGCGGTTCCTTTTTCTGTCATCCCGccc                                                                                                        >  5:333239/1‑149 (MQ=255)
                                              gACCAGAGTGGTGTCGCCCAATCCGCCACCATCACCCAGCTGGGCAGCGCGAACCTGGCCACTGTGACCCAGCAGTAAACCGCTCCCCCTTGAACCGCGGcaccagggagaggagcaccgcggttcaagg                                                                                                                        >  5:167264‑M1/1‑100 (MQ=255)
                                              gACCAGAGTGGTGTCGCCCAATCCGCCACCATCACCCAGCTGGGCAGCGCGAACCTGGCCACTGTGACCCAGCAGTAAACCGCTCCCCCTTGAACCGCGGcaccagggagaggagcaccgcggttcaagg                                                                                                                        <  6:167264‑M1/130‑31 (MQ=255)
                                              gACCAGAGTGGTGTCGCCCAATCCGCCACCATCACCCAGCTGGGCAGCGCGAACCTGGCCACTGTGACCCAGCAGTAAACCGCTCCCCCTTGAACCGCGGcaccagggagaggagcaccgcggttcaag                                                                                                                         <  1:39417‑M1/129‑30 (MQ=255)
                                              gACCAGAGTGGTGTCGCCCAATCCGCCACCATCACCCAGCTGGGCAGCGCGAACCTGGCCACTGTGACCCAGCAGTAAACCGCTCCCCCTTGAACCGCGGcaccagggagaggagcaccgcggttcaag                                                                                                                         >  2:39417‑M1/1‑100 (MQ=255)
                                              gACCAGAGTGGTGTCGCCCAATCCGCCACCATCACCCAGCTGGGCAGCGCGAACCTGGCCACTGTGACCCAGCAGTAAACCGCTCCCCCTTGAACCGCGGTGCTCCTCTCCCTGGTGCCGCGGTTCCTTTTTCTGTCATCCCGCCctct                                                                                                     <  5:187136/149‑1 (MQ=255)
                                               aCCAGAGTGGTGTCGCCCAATCCGCCACCATCACCCAGCTGGGCAGCGCGAACCTGGCCACTGTGACCCAGAAGTAAACCGCTCCCCCTTGAACCGCGGTGCTCCACGCCCTGGTGCCGCGGTTCCTTTTTCTGTCATCCCGCCCTCTg                                                                                                    >  2:135673/1‑149 (MQ=255)
                                                   gagTGGTGTCGCCCAATCCGCCACCATCACCCAGCTGGGCAGCGCGAACCTGGCCACTGTGACCCAGCAGTAAACCGCTCCCCCTTGAACCGCGGTGCTCCTCTCCCTGGTGCCGCGGTTCCTTTTTCTGTCATCCCGCCCTCTGCCa                                                                                                 >  8:20695/1‑148 (MQ=255)
                                                   gagTGGTGTCGCCCAATCCGCCACCATCACCCAGCTGGGCAGCGCGAACCTGGCCACTGTGACCCAGCAGTAAACCGCTCCCCCTTGAACCGCGGTGCTCCTCTCCCTGGTGCCGCGGTTCCTTTTTCTGTCATCCCGCCCTCTGCCAt                                                                                                >  7:279206/1‑149 (MQ=255)
                                                       ggtgTCGCCCAATCCGCCACCATCACCCAGCTGGGCAGCGCGAACCTGGCCACTGTGACCCAGCAGTAAACCGCTCCCCCTTGAACCGCGGTGCTCCTCTCCCTGGTGCCGCGGTTCCTTTTTCTGTCATCCCGCCCTCTGCCATCGtt                                                                                            <  2:276297/149‑1 (MQ=255)
                                                        gtgtCGCCCAATCCGCCACCATCACCCAGCTGGGCAGCGCGAACCTGGCCACTGTGACCCAGCAGTAAACCGCTCCCCCTTGAACCGCGGTGCTCCTCTCCCTGGTGCCGCGGTTCCTTTTTCTGTCATCCCGCCCTCTGCCATCGTTc                                                                                           <  7:315296/149‑1 (MQ=255)
                                                             gCCCAATCCGCCACCATCACCCAGCTGGGCAGCGCGAACCTGGCCACTGTGACCCAGCAGTAAACCGCTCCCCCTTGAACCGCGGTGCTCCTCTCCCTGGTGCCGCGGTTCCTTTTTCTGTCATCCCGCCCTCTGCCATCGTTCGATcc                                                                                      >  3:264615/1‑149 (MQ=255)
                                                              cccAATCCGCCACCATCACCCAGCTGGGCAGCGCGAACCTGGCCACTGTGACCCAGCAGTAAACCGCTCCCCCTTGAACCGCGGTGCTCCTCTCCCTGGTGCCGCGGTTCCTTTTTCTGTCATc                                                                                                              >  3:68314/1‑124 (MQ=255)
                                                              cccAATCCGCCACCATCACCCAGCTGGGCAGCGCGAACCTGGCCACTGTGACCCAGCAGTAAACCGCTCCCCCTTGAACCGCGGTGCTCCTCTCCCTGGTGCCGCGGTTCCTTTTTCTGTCATc                                                                                                              <  4:68314/124‑1 (MQ=255)
                                                                   tCCGCCACCATCACCCAGCTGGGCAGCGCGAACCTGGCCACTGTGACCCAGCAGTAAACCGCTCCCCCTTGAACCGCGGTGCTCCTCTCCCTGGTGCCGCGGTTCCTTTTTCTGTCATCCCGCCCTCTGCCATCGTTCGATccggccgg                                                                                >  2:162871/1‑149 (MQ=255)
                                                                      gCCACCATCACCCAGCTGGGCAGCGCGAACCTGGCCACTGTGACCCAGCAGTAAACCGCTCCCCCTTGAACCGCGGTGCTCCTCTCCCTGGTGCCGCGGTTCCTTTTTCTGTCATCCCGCCCTCTGcc                                                                                                  >  2:167364/1‑128 (MQ=255)
                                                                      gCCACCATCACCCAGCTGGGCAGCGCGAACCTGGCCACTGTGACCCAGCAGTAAACCGCTCCCCCTTGAACCGCGGTGCTCCTCTCCCTGGTGCCGCGGTTCCTTTTTCTGTCATCCCGCCCTCTGcc                                                                                                  <  1:167364/128‑1 (MQ=255)
                                                                            aTCACCCAGCTGGGCAGCGCGAACCTGGCCACTGTGACCCAGCAGTAAACCGCTCCCCCTTGAACCGCGGTGCTCCTCTCCCTGGTGCCGCGGTTCCTTTTTCTGTCATCCCGCCCTCTGCCATCGTTCGATCCGGCCGGCGCGTGTaa                                                                       >  8:139754/1‑149 (MQ=255)
                                                                               aCCCAGCTGGGCAGCGCGAACCTGGCCACTGTGACCCAGCAGTAAACCGCTCCCCCTTGAACCGCGGTGCTCCTCTCCCTGGTGCCGCGGTTCCTTTTTCTGTCATCCCGCCCTCTGCCATCGTTCGATCCGGCCGGCGCGTGTAATc                                                                     <  8:18040/148‑1 (MQ=255)
                                                                                    gCTGGGCAGCGCGAACCTGGCCACTGTGACCCAGCAGTAAACCGCTCCCCCTTGAACCGCGGTGCTCCTCTCCCTGGTGCCGCGGTTCCTTTTTCTGTCATCCCGCCCTCTGCCATCGTTCGATCCGGCCGGCGCGTGTAATCCCCTGa                                                               <  5:89552/149‑1 (MQ=255)
                                                                                        ggCAGCGCGAACCTGGCCACTGTGACCCAGCAGTAAACCGCTCCCCCTTGAACCGCGGTGCTCCTCTCCCTGGTGCCGCGGTTCCTTTTTCTGTCATCCCGCCCTCTGCCATCGTTCGATCCGGCCGGCGCGTGTAATCCCCTGACgtg                                                           >  5:63531/1‑149 (MQ=255)
                                                                                           aGCGCGAACCTGGCCACTGTGACCCAGCAGTAAACCGCTCCCCCTTGAACCGCGGTGCTCCTCTCCCTGGTGCCGCGGTTCCTTTTTCTGTCATCCCGCCCTCTGCCATCGTTCGATCCGGCCGGCGCGTGTAATCCCCTGACGTGTAg                                                        <  7:20695/149‑1 (MQ=255)
                                                                                                gAACCTGGCCACTGTGACCCAGCAGTAAACCGCTCCCCCTTGAACCGCGGTGCTCCTCTCCCTGGTGCCGCGGTTCCTTTTTCTGTCATCCCGCCCTCTGCCATCGTTCGATCCGGCCGGCGCGTGTAATCCCCTGACGTGTAGCTGTc                                                   <  1:162871/149‑1 (MQ=255)
                                                                                                  aCCTGGCCACTGTTACCCAGCAGTAAACCGCTCCCCCTTGAACCGCGGTGCTCGTCTCCCTGGTGCCGCGGTTCCTTTTTCTGTCATCCCGCCCTCTGCCATCGTTCGATCCGGCCGGCGCGTGTAATCCCCTGACGGGTAGCTGTCgg                                                 <  1:135673/149‑1 (MQ=255)
                                                                                                   ccTGGCCACTGTGACCCAGCAGTAAACCGCTCCCCCTTGAACCGCGGTGCTCCTCTCCCTGGTGCCGCGGTTCCTTTTTCTGTCATCCCGCCCTCTGCCATCGTTCGATCCGGCCGGCGCGTGTAATCCCCTGACGTGTAGCTGTCggg                                                <  6:118983/149‑1 (MQ=255)
                                                                                                      ggCCACTGTGACCCAGCAGTAAACCGCTCCCCCTTGAACCGCGGTGCTCCTCTCCCTGGTGCCGCGGTTCCTTTTTCTGTCATCCCGCCCTCTGCCATCGTTCGATCCGGCCGGCGCGTGTAATCCCCTGACGTGTAGCTGTCGGGTa                                              >  6:28494/1‑148 (MQ=255)
                                                                                                       gCCACTGTGACCCAGCAGTAAACCGCTCCCCCTTGAACCGCGGTGCTCCTCTCCCTGGTGCCGCGGTTCCTTTTTCTGTCATCCCGCCCTCTGCCATCGTTCGATCCGGCCGGCGCGTGTAATCCCCTGACGTGTAGCTGTCGGGTAc                                             <  7:139754/148‑1 (MQ=255)
                                                                                                         cACTGTGACCCAGCAGTAAACCGCTCCCCCTTGAACCGCGGTGCTCCTCTCCCTGGTGCCGCGGTTCCTTTTTCTGTCATCCCGCCCTCTGCCATCGTTCGATCCGGCCGGCGCGTGTAATCCCCTGACGTGTAGCTGTCGGGTACAAt                                          >  7:21154/1‑149 (MQ=255)
                                                                                                                aCCCAGCAGTAAACCGCTCCCCCTTGAACCGCGGTGCTCCTCTCCCTGGTGCCGCGGTTCCTTTTTCTGTCATCCCGCCCTCTGCCATCGTTCGATCCGGCCGGCGCGTGTAATCCCCTGACGTGTAGCTGTCGGGTACAATGGCaaa                                    <  5:28494/148‑1 (MQ=255)
                                                                                                                aCCCAGCAGTAAACCGCTCCCCCTTGAACCGCGGTGCTCCTCTCCCTGGTGCCGCGGTTCCTTTTTCTGTCATCCCGCCCTCTGCCATCGTTCGATCCGGCCGGCGCGTGTAATCCCCTGACGTGTAGCTGTCGGGTACAATGGCAAAc                                   >  6:134532/1‑149 (MQ=255)
                                                                                                                  ccAGCAGTAAACCGCTCCCCCTTGAACCGCGGTGCTCCTCTCCCTGGTGCCGCGGTTCCTTTTTCTGTCATCCCGCCCTCTGCCAGCGTTCGATCCGGCCGGCGCGTGTAATCCCCTGACGTGTAGCTGTCGGGTACAATGGCAAAccc                                 >  8:189542/1‑148 (MQ=255)
                                                                                                                   cagcagTAAACCGCTCCCCCTTGAACCGCGGTGCTCCTCTCCCTGGTGCCGCGGTTCCTTTTTCTGTCATCCCGCCCTCTGCCATCGTTCGATCCGGCCGGCGCGTGTAATCCCCTGACgtg                                                           <  8:60262/122‑1 (MQ=255)
                                                                                                                   cagcagTAAACCGCTCCCCCTTGAACCGCGGTGCTCCTCTCCCTGGTGCCGCGGTTCCTTTTTCTGTCATCCCGCCCTCTGCCATCGTTCGATCCGGCCGGCGCGTGTAATCCCCTGACgtg                                                           >  7:60262/1‑122 (MQ=255)
                                                                                                                   cagcagTAAACCGCTCCCCCTTGAACCGCGGTGCTCCTCTCCCTGGTGCCGCGGTTCCTTTTTCTGTCATCCCGCCCTCTGCCATCGTTCGATCCGGCCGGCGCGTGAAATCCCCTGACGTGTAGCTGTCGGGTACAATGGCAAACCGc                                >  1:134273/1‑149 (MQ=255)
                                                                                                                       agTAAACCGCTCCCCCTTGAACCGCGGTGCTCCTCTCCCTGGTGCCGCGGTTCCTTTTTCTGTCATCCCGCCCTCTGCCATCGTTCGATCCGGCCGGCGCGTGTAATCCCCTGACGTGTAGCTGTCGGGTACAATGGCAAACCGCTCg                             >  5:110653/1‑148 (MQ=255)
                                                                                                                        gTAAACCGCTCCCCCTTGAACCGCGGTGCTCCTCTCCCTGGTGCCGCGGTTCCTTTTTCTGTCATCCCGCCCTCTGCCATCGTTCGATCCGGCCGGCGCGTGTAATCCCCTGACGTGTAGCTGTCGGGTACAATGGCAAACCGCTCGaa                           <  5:134532/149‑1 (MQ=255)
                                                                                                                         tAAACCGCTCCCCCTTGAACCGCGGTGCTCCTCTCCCTGGTGCCGCGGTTCCTTTTTCTGTCATCCCGCCCTCTGCCATCGTTCGATCCGGCCGGCGCGTGTAATCCCCTGACGTGTAGCTGTCGGGTACAATGGCAAACCGCTCg                             >  2:272663/1‑146 (MQ=255)
                                                                                                                                    cccTTGAACCGCGGTGCTCCTCTCCCTGGTGCCGCGGTTCCTTTTTCTGTCATCCCGCCCTCTGCCATCGTTCGATCCGGCCGGCGCGTGTAATCCCCTGACGTGTAGCTGTCGGGTACAATGGCAAACCGCTCGAAGATGTGCAGCca               <  8:21154/149‑1 (MQ=255)
                                                                                                                                     tgttGAAGAGCTGTGCTCCTGTCCGTGGTGGCGCGGTTCCTTTTTCTGTCATCCCGGCCTCTGCCATGGTTCGATCCGGCCGGCGCGTGTAATCCGCTGACGTGTAGCTGTCGGGTACATTGGCAAACGGCTGGAAGTTGTGCAGCcac              <  6:63531/147‑1 (MQ=255)
                                                                                                                                     ccTTGAACCGCGGTGCTCCTCTCCCTGGTGccgcggttcaagggggagcggtttactgctgggtcacagtggccaggttcgcgctgcccagctgggtgatggtggcggattgggcgacaccactctggtc                                 <  6:167264‑M2/130‑101 (MQ=255)
                                                                                                                                     ccTTGAACCGCGGTGCTCCTCTCCCTGGTGccgcggttcaagggggagcggtttactgctgggtcacagtggccaggttcgcgctgcccagctgggtgatggtggcggattgggcgacaccactctggtc                                 >  5:167264‑M2/1‑30 (MQ=255)
                                                                                                                                      cTTGAACCGCGGTGCTCCTCTCCCTGGTGccgcggttcaagggggagcggtttactgctgggtcacagtggccaggttcgcgctgcccagctgggtgatggtggcggattgggcgacaccactctggtc                                 >  2:39417‑M2/1‑29 (MQ=255)
                                                                                                                                      cTTGAACCGCGGTGCTCCTCTCCCTGGTGccgcggttcaagggggagcggtttactgctgggtcacagtggccaggttcgcgctgcccagctgggtgatggtggcggattgggcgacaccactctggtc                                 <  1:39417‑M2/129‑101 (MQ=255)
                                                                                                                                      cTTGAACCGCGGTGCTCCTCTCCCTGGTGCCGCGGTTCCTTTTTCTGTCATCCCGCCCTCTGCCATCGTTCGATCCGGCCGGCGCGTGTAATCCCCTGACGTGTAGCTGTCGGGTACAATGGCAAACCGCTCGAAGATGTGCAGCcaca             >  2:234167/1‑149 (MQ=255)
                                                                                                                                      cTTGAACAGCGGACCTCCTCACCCTGGAGCCGCGGTTCCTTTTTCTGTAATCCCGACCTCTGCCATCGTTAGATCCGGCATGCGCGTCTAATCCACTGACCATTAGCTGTCTGGTACAATGGCAAACCGAACGAAGATATGAAGCcaca             >  2:225807/1‑149 (MQ=255)
                                                                                                                                       ttGAACCGCGGTGCTCCTCTCCCTGGTGccgcggttcaagggggagcggtttactgctgggtcacagtggccaggttcgcgctgcccagctgggtgatggtggcggattgggcgacaccactctggtcgacgaacgccttgttgctttg            <  3:54245‑M2/149‑122 (MQ=255)
                                                                                                                                       ttGAACCGCGGTGCTCCTCTCCCTGGTGCCGCGGTTCCTTTTTCTGTCATCCCGCCCTCTGCCATCGTTCGATCCGGCCGGCGCGTGTAATCCCCTGACGTGTAGCTGTCGGGTACAATGGCAAACCGCTCGAAGATGTGCAGCCACAt            >  3:267961/1‑149 (MQ=255)
                                                                                                                                          aaCCGCGGTGCTCCTCTCCCTGGTGCCGCGGTTCCTTTTTCTGTCATCCCGCCCTCTGCCATCGTTCGATCCGGCCGGCGCGTGTAATCCCCTGACGTGTAGCTGTCGGGTACAATGGCAAACCGCTCGAAGATGTGCAGCCACATGa          <  6:333239/148‑1 (MQ=255)
                                                                                                                                           aCCGCGGTGCTCCTCTCCCTGGTGCCGCGGTTCCTTTTTCTGTCATCCCGCGCTCTGCCATCGGTCGAGCCGGCCGGCGAGTGTAATCCCCTGACGTGTAGCTGTCGGGTACAATGGCAAACCGCTCGAAGATGTGCAGCCACATGATc        <  8:315029/149‑1 (MQ=255)
                                                                                                                                           aCCGCGGTGCTCCTCTCCCTGGTGCCGCGGTTCCTTTTTCTGTCATCCCGCCCTCTGCCATCGTTCGATCCGGCCGGCGCGTGTAATCCCCTGACGTGTAGCTGTCGGGTACAATGGCAAACCGCTCGAAGATGTGCAGCCACATGATc        >  4:13399/1‑149 (MQ=255)
                                                                                                                                           aCCGCGGTGCTCCTCTCCCTGGTGCCGCGGTTCCTTTTTCTGTCATCCCGCCCTCTGCCATCGTTCGATCCGGCCGGCGCGTGTAATCCCCTGACGTGTAGCTGTCGGGTACAATGGCAAACCGCTCGAAGATGTGCAGCCACATGATc        <  4:264615/149‑1 (MQ=255)
                                                                                                                                           aCCGCGGTGCTCCTCTCCCTGGTGCCGCGGTTCCTTTTTCTGTCATCCCGCCCTCTGCCATCGTTCGATCCGGCCGGCGCGTGTAATCCCCTGACGTGTAGCTGTCGGGTACAATGGCAAACCGCTCGAAGATGTGCAGCCACATGATc        <  3:13399/149‑1 (MQ=255)
                                                                                                                                            ccGCGGTGCTCCTCTCCCTGGTGCCGCGGTTCCTTTTTCTGTCATCCCGCCCTCTGCCATCGTTCGATCCGGCCGGCGCGTGTAATCCCCTGACGTGTAGCTGTCGGGTACAATGGCAAACCGCTCGAAGATGTGCAGCCACATGATcc       <  8:279206/149‑1 (MQ=255)
                                                                                                                                             cgcgGTGCTCCTCTCCCTGGTGCCGCGGTTCCTTTTTCTGTCATCCCGCCCTCTGCCATCGTTCGATCCGGCCGGCGCGTGTAATCCCCTGACGTGTAGCTGTCGGGTACAATGGCAAACCGCTCGAAGATGTGCa                   >  5:224177/1‑136 (MQ=255)
                                                                                                                                             cgcgGTGCTCCTCTCCCTGGTGCCGCGGTTCCTTTTTCTGTCATCCCGCCCTCTGCCATCGTTCGATCCGGCCGGCGCGTGTAATCCCCTGACGTGTAGCTGTCGGGTACAATGGCAAACCGCTCGAAGATGTGCa                   <  6:224177/136‑1 (MQ=255)
                                                                                                                                               cgGTGCTCCTCTCCCTGGTGCCGCGGTTCCTTTTTCTGTCATCCCGCCCTCTGCCATCGTTCGATCCGGCCGGCGCGTGTAATCCCCTGACGTGTAGCTGTCGGGTACAATGGCAAACCGCTCGANTATGNTCAGCCACATGATCCAg     >  6:20572/1‑148 (MQ=255)
                                                                                                                                                 gTGCTCCTCTCCCTGGTGccgcggttcaagggggagcggtttactgctgggtcacagtggccaggttcgcgctgcccagctgggtgatggtggcggattgggcgacaccactctggtcgacgaacgccttgttgctttggcctccctgg  >  4:54245‑M2/1‑18 (MQ=255)
                                                                                                                                                 |                                                                                                                                                    
CGTCGCCTACGTGACCCAGGGAGGCCAAAGCAACAAGGCGTTCGTCGACCAGAGTGGTGTCGCCCAATCCGCCACCATCACCCAGCTGGGCAGCGCGAACCTGGCCACTGTGACCCAGCAGTAAACCGCTCCCCCTTGAACCGCGGTGCTCCTCTCCCTGGTGCCGCGGTTCCTTTTTCTGTCATCCCGCCCTCTGCCATCGTTCGATCCGGCCGGCGCGTGTAATCCCCTGACGTGTAGCTGTCGGGTACAATGGCAAACCGCTCGAAGATGTGCAGCCACATGATCCAGTCC  >  NC_002947/3852331‑3852624

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.