New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3936535	53 (0.940)	3 (0.060)	3/246	NT	5.9%	coding (321/969 nt)	PP_3469	hypothetical protein
	?	NC_002947	= 3936553	46 (0.860)					coding (339/969 nt)	PP_3469	hypothetical protein

CCATAACCCGCAGTACGGAAAACACCTCCTTACCGCAGGCTTACACCTCATACGGCTACGAGCAACCGCCAGAGCCCACGCTCAAATTAACGGGTTTTACCGGCCAACCCCGATCAGTATCTGCACATTTATACCTGATGGGCAGTGGGCGCCGTGCCTATAATACTGCCCTCATGCGCTTCTGTTCTCCTGACTATCTAAGTCCATTTTCGAAAGGTGGGATCAACGCTTACGTTTACTGCAACA‑ATGACCCCACAAATTACTCAGATCAATCGGGTCGCGTCAGGACA  >  NC_002947/3936390‑3936679                                                                                                                                                  |                                                                                                                                                  ccATAACCCGCAGTACGGAAAACACCTCCTTACCGCAGGCTTACACCTCATACGGCTACGAGCAACCGCCAGAGCCCACGCTCAAATTAACGGGTTTTACCGGCCAACCCCGATCAGTATCTGCACATTTATACCTGATGGGCAGTggg                                                                                                                                                >  1:170680/1‑149 (MQ=255)  cATAACCCGCAGTACGGAAAACACCTCCTTACCGCAGGCTTACACCTCATACGGCTACGAGCAACCGCCAGAGCCCACGCTCAAATTAACGGGTTTTACCGGCCAACCCCGATCAGTATCTGCACATTTATACCTGATGGGCAGTGGgc                                                                                                                                               >  3:160314/1‑149 (MQ=255)       cccGCAGTACGGAAAACACCTCCTTACCGCAGGCTTACACCTCATACGGCTACGAGCAACCGCCAGAGCCCACGCTCAAATTAACGGGTTTTACCGGCCAACCCCGATCAGTATCTGCACATTTATACCTGATGGGCAGTGGGCGCCGt                                                                                                                                          >  7:70641/1‑149 (MQ=255)         cGCAGTACGGAAAACACCTCCTTACCGCAGGCTTACACCTCATACGGCTACGAGCAACCGCCAGAGCCCACGCTCAAATTAACGGGTTTTACCGGCCAACCCCGATCAGTATCTGCACATTTATACCTGATGGGCAGTGGccgccgatc                                                                                                                                        >  6:254784/1‑146 (MQ=255)            aGTACGGAAAACACCTCCTTACCGCAGGCTTACACCTCATACGGCTACGAGCAACCGCCAGAGCCCACGCTCAAATTAACGGGTTTTACCGGCCAACCCCGATCAGTATCTGCACATTTATACCTGATGGGCAGTGGGCGCCGTGCCta                                                                                                                                     <  2:170680/149‑1 (MQ=255)                cGGAAAACACCTCCTTACCGCAGGCTTACACCTCATACGGCTACGAGCAACCGCCAGAGCCCACGCTCAAATTAAGGGGTTTTACCGGCCAACCCCGATCAGTATCTGCACATTTATACCTGATGGGCAGTGGGCGCCGTGCCTataa                                                                                                                                  <  4:160314/148‑1 (MQ=255)                    aaaCACCTCCTTACCGCAGGCTTACACCTCATACGGCTACGAGCAACCGCCAGAGCCCACGCTCAAATTAACGGGTTTTACCGGCCAACCCCGATCAGTATCTGCACATTTATACCTGATGGGCAGTGGGCGCCGTGCCTATAATa                                                                                                                                >  4:314288‑M2/1‑145 (MQ=255)                    aaaCACCTCCTTACCGCAGGCTTACACCTCATACGGCTACGAGCAACCGCCAGAGCCCACGCTCAAATTAACGGGTTTTACCGGCCAACCCCGATCAGTATCTGCACATTTATACCTGATGGGCAGTGGGCGCCGTGCCTATAATa                                                                                                                                <  3:314288‑M2/146‑2 (MQ=255)                    aaaCACCTCCTTACCGCAGGCTTACACCTCATACGGCTACGAGCAACCGCAAGAGCCCACCCTGAAATTAACGGGTTTAACCGGCCAACCCCGATCAGTATCTGCACATTTATACCTGATCGCCAGAGGGAGCCGTGCCTATAATacag                                                                                                                             <  7:82553‑M2/149‑5 (MQ=255)                         cctcctTACCGCAGGCTTACACCTCATACGGATACGAGCAACCGCCAGAGCCCACGCTCAAATTAACGGGTTTTACCGGCCCACCCCGATCAGTATCTGCACATTTATACCTGATGGGCAGTGGGCGCCGTGCCTATAATACTTCCCt                                                                                                                         >  2:206472/1‑148 (MQ=255)                            cctTACCGCAGGCTTACACCTCATACGGCTACGAGCAACCGCCAGAGCCCACGCTCAAATTAACGGGTTTTACCGGCCAACCCCGATCAGTATCTGCACATTTATACCTGATGGGCAGTGGGCGCCGTGCCTATAATACTGCCCTCATg                                                                                                                     >  7:103383/1‑149 (MQ=255)                             ctTACCGCAGGCTTACACCTCATACGGCTACGAGCAACCGCCAGAGCCCACGCTCAAATTAACGGGTTTTACCGGCCAACCCCGATCAGTATCTGCACATTTATACCTGATGGGCAGTattataggcacggcgcccactgcccatcagg                                                                                                                    >  5:137894‑M1/1‑118 (MQ=255)                             ctTACCGCAGGCTTACACCTCATACGGCTACGAGCAACCGCCAGAGCCCACGCTCAAATTAACGGGTTTTACCGGCCAACCCCGATCAGTATCTGCACATTTATACCTGATGGGCAGTGGGCGCCGTGCCTATAATACTGCCCTc                                                                                                                        <  5:138152/145‑1 (MQ=255)                             ctTACCGCAGGCTTACACCTCATACGGCTACGAGCAACCGCCAGAGCCCACGCTCAAATTAACGGGTTTTACCGGCCAACCCCGATCAGTATCTGCACATTTATACCTGATGGGCAGTGGGCGCCGTGCCTATAATACTGCCCTc                                                                                                                        >  6:138152/1‑145 (MQ=255)                                 ccGCAGGCTTACACCTCATACGGCTACGAGCAACCGCCAGAGCCCACGCTCAAATTAACGGGTTTTACCGGCCAACCCCGATCAGTATCTGCACATTTATACCTGATGGGCAGTattataggcacggcgcccactgcccatcaggtat                                                                                                                 <  2:184867‑M1/148‑35 (MQ=255)                                  cGCAGGCTTACACCTCATACGGCTACGAGCAACCGCCAGAGCCCACGCTCAAATTAACGGGTTTTACCGGCCAACCCCGATCAGTATCTGCACATTTATACCTGATGGGCAGTGGGCGCCGTGCCTATAATACTGCCCTc                                                                                                                        >  3:148159/1‑140 (MQ=255)                                  cGCAGGCTTACACCTCATACGGCTACGAGCAACCGCCAGAGCCCACGCTCAAATTAACGGGTTTTACCGGCCAACCCCGATCAGTATCTGCACATTTATACCTGATGGGCAGTGGGCGCCGTGCCTATAATACTGCCCTc                                                                                                                        <  4:148159/140‑1 (MQ=255)                                   gCAGGCTTACACCTCATACGGCTACGAGCAACCGCCAGAGCCCACGCTCAAATTAACGGGTTTTACCGGCCAACCCCGATCAGTATCTGCACATTTATACCTGATGGGCAGTGGGCGCCGTGCCTATAATACTGCCCTCATGCGCTTCt                                                                                                              <  5:157150/149‑1 (MQ=255)                                    cAGGCTTACACCTCATACGGCTACGAGCAACCGCCAGAGCCCACGCTCAAATTAACGGGTTTTACCGGCCAACCCCGATCAGTATCTGCACATTTATACCTGATGGGCAGTGGGCGcc                                                                                                                                            >  8:180925/1‑118 (MQ=255)                                    cAGGCTTACACCTCATACGGCTACGAGCAACCGCCAGAGCCCACGCTCAAATTAACGGGTTTTACCGGCCAACCCCGATCAGTATCTGCACATTTATACCTGATGGGCAGTGGGCGcc                                                                                                                                            <  7:180925/118‑1 (MQ=255)                                    cAGGCTTACACCTCATACGGCTACGAGCAACCGCCAGAGCCCACGCTCAAATTAACGGGTTTTACCGGCCAACCCCGATCAGTATCTGCACATTTATACCTGATGGGCAGTGGGCGCCGTGCCTATAATACTGCCCTCATGCGCTTCTg                                                                                                             >  6:148015/1‑149 (MQ=255)                                         ttACACCTCATACGGCTACGAGCAACCGCCAGAGCCCACGCTCAAATTAACGGGTTTTACCGGCCAACCCCGATCAGTATCTGCACATTTATACCTGATGGGCAGTGGGCGCCGTGCCTATAATACTGCCCTCATGCGCTTCTGTtctc                                                                                                        >  5:18510/1‑149 (MQ=255)                                         ttACACCTCATACGGCTACGAGCAACCGCCAGAGCCCACGCTCAAATTAACGGGTTTTACCGGCCAACCCCGATCAGTATCTGCACATTTATACCTGATGGGCAGTGGGCGCCGTGCCTATAATACTGCCCTCATGCGCTTCTGTtctc                                                                                                        >  4:255947/1‑149 (MQ=255)                                            cacCTCATACGGCTACGAGCAACCGCCAGAGCCCACGCTCAAATTAACGGGTTTTACCGGCCAACCCCGATCAGTATCTGCACATTTATACCTGATGGGCAGTGGGCGCCGTGCCTATAATACTGCCCTCATGCGCTTCTGTTCTCCt                                                                                                      <  6:18510/148‑1 (MQ=255)                                              ccTCATACGGCTACGAGCAACCGCCAGAGCCCACGCTCAAATTAACGGGTTTTACCGGCCAACCCCGATCAGTATCTGCACATTTATACCTGATGGGCAGTattataggcacggcgcccactgcccatcaggtataaatgtgcagatac                                                                                                   <  6:137894‑M1/149‑49 (MQ=255)                                                   tACGGCTACGAGCAACCGCCAGAGCCCACGCTCAAATTAACGGGTTTTACCGGCCAACCCCGATCAGTATCTGCACATTTATACCTGATGGGCAGTGGGCGCCGTGCCTATAATACTGCCCTCATGCGCTTCTGTTCTCCTGACTATCt                                                                                              <  8:55870/149‑1 (MQ=255)                                                     cGGCTACGAGCAACCGCCAGAGCCCACGCTCAAATTAACGGGTTTTACCGGCCAACCCCGATCAGTATCTGCACATTTATACCTGATGGGCAGTGGGCGCCGTGCCTATAATACTGCCCTCATGCGCTTCTGTTCTCCTGACTATCt                                                                                              >  2:209234/1‑147 (MQ=255)                                                      gtcTACGAGCAACCGCCAGAGCCCACGCTCAAATTAACGGGTTTTACCGGCCAACCCCGATCAGTATCTGCACATTTATACCTGATGGGCAGTGGGCGCCGTGCCTATAATACTGCCCTCATGCGCTTCTGTTCTCCTGACTATCTAAg                                                                                           <  4:207686/147‑1 (MQ=255)                                                      ggCTACGAGCAACCGCCAGAGCCCACGCTCAAATTAACGGGTTTTACCGGCCAACCCCGATCAGTATCTGCACATTTATACCTGATGGGCAGTGGGCGCCGTGCCTATAATACTGCCCTCATGCGCTTCTGTTCTCCTGACTATCTAAg                                                                                           <  5:272168/149‑1 (MQ=255)                                                       gCTACGAGCAACCGCCAGAGTCCACGCTCAAATTAACGGGTTTTACCGGCCAACCCCGATCAGTATCTTCACATTTATACCTGATGGGCAGTGGGCGCCGTGCCTATAATACTGCCCTCATGCGCTTCTGTTCTCCTGACTATCTAAGt                                                                                          <  5:254784/149‑1 (MQ=255)                                                            gAGCAACCGCCAGAGCCCACGCTCAAATTAACGGGTTTTACCGGCCAACCCCGATCAGTATCTGCACATTTATACCTGATGGGCAGTGGGCGCCGTGCCTATAATACTGCCCTCATGCGCTTCTGTTCTCCTGACTATCTaa                                                                                            <  6:328197/142‑1 (MQ=255)                                                            gAGCAACCGCCAGAGCCCACGCTCAAATTAACGGGTTTTACCGGCCAACCCCGATCAGTATCTGCACATTTATACCTGATGGGCAGTGGGCGCCGTGCCTATAATACTGCCCTCATGCGCTTCTGTTCTCCTGACTATCTaa                                                                                            >  5:328197/1‑142 (MQ=255)                                                            gAGCAACCGCCAGAGCCCACGCTCAAATTAACGGGTTTTACCGGCCAACCCCGATCAGTATCTGCACATTTATACCTGATGGGCAGTGGGCGCCGTGCCTATAATACTGCCCTCATGCGCTTCTGTTCTCCTGACTATCTAAGTCCAtt                                                                                     <  3:255947/149‑1 (MQ=255)                                                            gAGCAACCGCCAGAGCCCACGCTCAAATTAACGGGTTTTACCGGCCAACCCCGATCAGTATCTGCACATTTATACCTGATGGGCAGTGGGCGCCGTGCCTATAATACTGCCCTCATGCGCTTCTGTTCTCCTGACTATCTAAGTCCAtt                                                                                     >  3:11113/1‑149 (MQ=255)                                                             aGCAACCGCCAGAGCCCACGCTGAAATTAACGGGTTTTACCGTCCAACGCCGATCAGTATCTGCACATTTATACCTGATGGGCAGTGGGCGCCGTGCCTATAATACTGCCCTCATGCGCTTCTGTTCTCCTGACTATCTTAGTCCAttt                                                                                    <  8:82553/149‑1 (MQ=255)                                                                  ccGCCAGAGCCCACGCTCAAATTAACGGGTTTTACCGGCCAACCCCGATCAGTATCTGCACATTTATACCTGATGGGCAGTGGGCGCCGTGCCTATAATACTGCCCTCATGCGCTTCTGTTCTCCTGACTATCTAAGTCCATTTTCGaa                                                                               <  8:103383/149‑1 (MQ=255)                                                                     ccAGAGCCCACGCTCAAATTAACGGGTTTTACCGGCCAACCCCGATCAGTATCTGCACATTTATACCTGATGGGCAGTGGGCGCCGTGCCTATAATACTGCCCTCATGCGCTTCt                                                                                                              <  6:45581/115‑1 (MQ=255)                                                                     ccAGAGCCCACGCTCAAATTAACGGGTTTTACCGGCCAACCCCGATCAGTATCTGCACATTTATACCTGATGGGCAGTGGGCGCCGTGCCTATAATACTGCCCTCATGCGCTTCt                                                                                                              >  5:45581/1‑115 (MQ=255)                                                                      cAGAGCCCACGCTCAAATTAACGGGTTTTACCGGCCAACCCCGATCAGTATCTGCACATTTATACCTGATGGGCAGTGGGCGCCGTGCCTATAATACTGCCCTCATGCGCTTCTGTTCTCCTGACTATCTAAGTCCATTTTCGAAAGGt                                                                           <  1:234280/149‑1 (MQ=255)                                                                       agagCCCACGCTCAAATTAACGGGTTTTACCGGCCAACCCCGATCAGTATCTGCACATTTATACCTGATGGGCAGTGGGCGCCGTGCCTATAATACTGCCCTCATGCGCTTCTGTTCTCCTGACTATCTAAGTCCATTTTCGAAAGGTg                                                                          <  5:148015/149‑1 (MQ=255)                                                                          gCCCACGCTCAAATTAACGGGTTTTACCGGCCAACCCCGATCAGTATCTGCACATTTATACCTGATGGGCAGTGGGCGCCGTGCCTATAATACTGCCCTCATGCGCTTCTGTTCTCCTGACTATCTAAGTCCATTTTCGAAAGGTggg                                                                        <  8:70641/148‑1 (MQ=255)                                                                            ccACGCTCAAATTAACGGGTTTTACCGGCCAACCCCGATCAGTATCTGCACATTTATACCTGATGGGCAGTGGGCGCCGTGCCTATAATACTGCCCTCATGCGCTTCTGTtctc                                                                                                        >  5:237795/1‑114 (MQ=255)                                                                            ccACGCTCAAATTAACGGGTTTTACCGGCCAACCCCGATCAGTATCTGCACATTTATACCTGATGGGCAGTGGGCGCCGTGCCTATAATACTGCCCTCATGCGCTTCTGTtctc                                                                                                        <  6:237795/114‑1 (MQ=255)                                                                            ccACGCTCAAATTAACGGGTTTTACCGGCCAACCCCGATCAGTATCTGCACATTTATACCTGATGGGCAGTGGGCGCCGTGCCTATAATACTGCCCTCATGCGCTTCTGTtctc                                                                                                        <  6:232383/114‑1 (MQ=255)                                                                            ccACGCTCAAATTAACGGGTTTTACCGGCCAACCCCGATCAGTATCTGCACATTTATACCTGATGGGCAGTGGGCGCCGTGCCTATAATACTGCCCTCATGCGCTTCTGTtctc                                                                                                        >  5:232383/1‑114 (MQ=255)                                                                                         aaCGGGTTTTACCGGCCAACCCCGATCAGTATCTGCACATTTATACCTGATGGGCAGTGGGCGCCGTGCCTATAATACTGCCCTCATGCGCTTCTGTTCTCCTGACTATCTAAGTCCATTTTCGAAAGGTGGGATCAACGCTTACGtt                                                         >  6:326350/1‑148 (MQ=255)                                                                                                      ggCCAACCCCGATCAGTATCTGCACATTTATACCTGATGGGCAGTGGGCGCCGTGCCTATAATACTGCCCTCATGCGCTTCTGTTCTCCTGACTATCTAAGTCCATTTTCGAAAGGTGGGATCAACGCTTACGTTTACTGCAACA‑ATGa                                          <  1:209234/149‑1 (MQ=255)                                                                                                       gCCAACCCCGATCAGTATCTGCACATTTATACCTGATGGGCAGTGGGCGCCGTGCCTATAATACTGCCCTCATGCGCTTCTGTTCTCCTGACTATCTAAGTCCATTTTCGAAAGGTGGGATCAACGCTTACGTTTACTGCAACA‑ATGAc                                         >  4:186737/1‑149 (MQ=255)                                                                                                                gATCAGTATCTGCACATTTATACCTGATGGGCAGTGGGCGCCGTGCCTATAATACTGCCCTCATGCGCTTCTGTTCTCCTGACTATCTAAGTCCATTTTCGAAAGGTGGGATCAACGCTTACGTTTACTGCAACA‑ATGACCCCACAAAt                                <  5:326350/149‑1 (MQ=255)                                                                                                                     gTATCTGCACATTTATACCTGATGGGCAGTGGGCGCCGTGCCTATAATactgcccatcaggtataaatgtgcagatactgatcggggttggccggtaaaacccgttaatttgagcgtgggctctggcggttgctcgtagccgtatgagg                            <  6:137894‑M2/149‑102 (MQ=255)                                                                                                                     gTATCTGCACATTTATACCTGATGGGCAGTGGGCGCCGTGCCTATAATACTGCCCTCATGCGCTTCTGTTCTCCTGACTATCTAAGTCCATTTTCGAAAGGTGGGATCAACGCTTACGTTTACTGCAACA‑ATGACCCCACAAATTACt                            >  5:333074/1‑148 (MQ=255)                                                                                                                     gTATCTGCACATTTATACCTGATGGGCAGTGGGCGCCGTGCCTATAATACTGCCCTCATGCGCTTCTGTTCTCCTGACTATCTAAGTCCATTTTCGAAAGGTGGGATCAACGCTTACGTTTACTGCAACA‑ATGACCCCACAAATTACTc                           <  3:186737/149‑1 (MQ=255)                                                                                                                           gCACATTTATACCTGATGGGCAGTGGGCGCCGTGCCTATAATACTGCCCTCATGCGCTTCTGTTCTCCTGACTATCTAAGTCCATTTTCGAAAGGTGGGATCAACGCTTACGTTTACTGCAACA‑ATGACCCCACAAATTACTCAGATc                      >  8:257762/1‑148 (MQ=255)                                                                                                                            cacaTTTATACCTGATGGGCAGTGGGCGCCGTGCCTATAATACTGCCCTCATGCGCTTCTGTTCTCCTGACTATCTAAGTCCATTTTCGAAAGGTGGGATCAACGCTTACGTTTACTGCAACA‑ATGACCCCACAAATTACTCAGAt                       <  4:11113/146‑1 (MQ=255)                                                                                                                               aTTTATACCTGATGGGCAGTGGGCGCCGTGCCTATAATACTGCCCTCATGCGCTTCTGTTCTCCTGACTATCTAAGTCCATTTTCGAAAGGTGGGATCAACGCTTACGTTTACTGCAACA‑ATGACCCCACAAATTACTCa                          >  8:224070/1‑140 (MQ=255)                                                                                                                               aTTTATACCTGATGGGCAGTGGGCGCCGTGCCTATAATACTGCCCTCATGCGCTTCTGTTCTCCTGACTATCTAAGTCCATTTTCGAAAGGTGGGATCAACGCTTACGTTTACTGAAACA‑ATGACCCCACAAATTACTCa                          <  7:224070/140‑1 (MQ=255)                                                                                                                                   ataCCTGATGGGCAGTGGGCGCCGTGCCTATAATactgcccatcaggtataaatgtgcagatactgatcggggttggccggtaaaacccgttaatttgagcgtgggctctggcggttgctcgtagccgtatgaggtgtaagcctgcgg               <  2:184867‑M2/148‑115 (MQ=255)                                                                                                                                    taCCTGATGGGCAGTGGGCGCCGTGCCTATAATACTGCCCTCATGCGCTTCTGTTCTCCTGACTATCTAAGTCCATTTTCGAAAGGTGGGATCAACGCTTACGTTTACTGCAACA‑ATGACCCCACAAATTACTCAGATCAATCGGGTc             <  7:257762/148‑1 (MQ=255)                                                                                                                                      ccTTATGGGCATTTGGCGCCGTGCCTATAATACTTCCCTCATGCGGTTCTGTTCTCCTGACTATCTAAGTCCATTTTCGAAAGGTGGGATCAACGCTTACGTTTACTGCAACATATGACCCCACAAATTACTCAGATCAATCGGGTcgc           <  1:236520/149‑1 (MQ=255)                                                                                                                                      ccTGATGGGCAGTGGGCGCCGTGCCTATAATactgcccatcaggtataaatgtgcagatactgatcggggttggccggtaaaacccgttaatttgagcgtgggctctggcggttgctcgtagccgtatgaggtgtaagcctgcggtaag           >  5:137894‑M2/1‑31 (MQ=255)                                                                                                                                      ccTGATGGGCAGTGGGATCCTTGCCTATAATACTGCCCTCATGCGCTTCTGTTCTCCTGACTATCTAAGTCCATTTTCGAAATGTGGGATCAACGCTTACGTTTACTGCAACA‑ATGACCCCACAAATTACTCAGATCAATCGGGTcgc           <  1:206472/148‑1 (MQ=255)                                                                                                                                       cTGATGGGCAGTGGGCGCCGTGCCTATAATACTGCCCTCATGCGCTTCTGTTCTCCTGACTATCTAAGTCCATTTTCGAAAGGTGGGATCAACGCTTACGTTTACTGCAACA‑ATGACCCCACAAATTACTCAGATCAATCGGGTCGCGt         >  2:148132/1‑149 (MQ=255)                                                                                                                                         gATGGGCAGTGGGCGCCGTGCCTATAATACTGCCCTCATGCGCTTCTGTTCTCCTGACTATCTAAGTCCATTTTCGAAAGGTGGGATCAACGCTTACGTTTACTGCAACA‑ATGACCCCACAAATTACTCAGATCAATCGGGTCGCGt         >  8:211725/1‑147 (MQ=255)                                                                                                                                             ggCAGTGGGCGCCGTGCCTATAATACTGCCCTCATGCGCTTCTGTTCTCCTGACTATCTAAGTCCATTTTCGAAAGGTGGGATCAACGCTTACGTTTACTGCAACA‑ATGACCCCACAAATTACTCAGATCAATCGGGTCGCGTCAGGac   >  8:235382/1‑149 (MQ=255)                                                                                                                                               ctgtattataggcacggctccctctggcgatcaggtataaatgtgcagatactgatcggggttggccggttaaacccgttaatttcagggtgggctcttgcggttgctcgtagccgtatgaggtgtaagcctgcggtaaggaggtgttt  <  7:82553‑M1/147‑146 (MQ=255)                                                                                                                                                  tattataggcacggcgcccactgcccatcaggtataaatgtgcagatactgatcggggttggccggtaaaacccgttaatttgagcgtgggctctggcggttgctcgtagccgtatgaggtgtaagcctgcggtaaggaggtgttt  <  3:314288‑M1/146‑146 (MQ=255)                                                                                                                                                  tattataggcacggcgcccactgcccatcaggtataaatgtgcagatactgatcggggttggccggtaaaacccgttaatttgagcgtgggctctggcggttgctcgtagccgtatgaggtgtaagcctgcggtaaggaggtgttt  >  4:314288‑M1/1‑1 (MQ=255)                                                                                                                                                  |                                                                                                                                                  CCATAACCCGCAGTACGGAAAACACCTCCTTACCGCAGGCTTACACCTCATACGGCTACGAGCAACCGCCAGAGCCCACGCTCAAATTAACGGGTTTTACCGGCCAACCCCGATCAGTATCTGCACATTTATACCTGATGGGCAGTGGGCGCCGTGCCTATAATACTGCCCTCATGCGCTTCTGTTCTCCTGACTATCTAAGTCCATTTTCGAAAGGTGGGATCAACGCTTACGTTTACTGCAACA‑ATGACCCCACAAATTACTCAGATCAATCGGGTCGCGTCAGGACA  >  NC_002947/3936390‑3936679

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.