New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	3941032 =	48 (0.850)	3 (0.060)	3/250	NT	5.9%	coding (168/531 nt)	PP_3475	type II secretion system pseudopilin PulG‑like signal peptide protein
	?	NC_002947	3941110 =	49 (0.900)					coding (90/531 nt)	PP_3475	type II secretion system pseudopilin PulG‑like signal peptide protein

CTGTTGCTGATCGGGTCAGGGTAAAGCCTGCGAATGTGCCGTTTGGCCTGCGGGTAGCGGTTGTCCTGTAGCAGGTCGGCCAGATCCTGGGGGTACTGGGCCAGC‑CCTGGCGAGGCGCGGTAGTAGCTGCGCAAGGCTTGGGCATACTGGCTGCCGACCCACAGCAACTGGCGTTCGCGGTCGCGCTGGGCG‑GCGCTCGCCCAGATCGTGCCGGTGGCCGCCAGGGCCACGCTGCTGA‑CCGCAATCAGCAGCAGCACCCCCAGGTATGTAAAGCCGCCGTTGGCCTTACCATTCA  >  NC_002947/3940886‑3941180                                                                                                                                                    |                                                                                                                                                       cTGTTGCTGATCGGGTCAGGGTAAAGCCTGCGAATGTGCCGTTTGGCCTGCGGGTAGCGGTTGTCCTGTAGCAGGTCGGCCAGATCCTGGGGGTACTGGGCCAGC‑CCTGGCGAGGCGCGGTAGTAGCTGCGCAAGGCTTGGGCATACTg                                                                                                                                                      >  7:40209/1‑149 (MQ=255)    ttGCTGATCGGGTCAGGGTAAAGCCTGCGAATGTGCCGTTTGGCCTGCGGGTAGCGGTTGTCCTGTAGCAGGTCGGCCAGATCCTGGGGGTACTGGGCCAGC‑CCTGGCGAGGCGCGGTAGTAGCTGCGCAAGGCTTGGGCATACTgg                                                                                                                                                     <  1:12064/147‑1 (MQ=255)    ttGCTGATCGGGTCAGGGTAAAGCCTGCGAATGTGCCGTTTGGCCTGCGGGTAGCGGTTGTCCTGTAGCAGGTCGGCCAGATCCTGGGGGTACTGGGCCAGC‑CCTGGCGAGGCGCGGTAGTAGCTGCGCAAGGCTTGGGCATACTGGc                                                                                                                                                    <  6:103052/148‑1 (MQ=255)         gATCGGGTCAGGGTAAAGCCTGCGAATGTGCCGTTTGGCCTGCGGGTAGCGGTTGTCCTGTAGCAGGTCGGCCAGATCCTGGGGGTACTGGGCCAGC‑CCTGGCGAGGCGCGGTAGTAGCTGCGCAAGGCTTGGGCATACTGGCTGCCGa                                                                                                                                              >  6:73646/1‑149 (MQ=255)             gggTCAGGGTAAAGCCTGCGAATGTGCCGTTTGGCCTGCGGGTAGCGGTTGTCCTGTAGCAGGTCGGCCAGATCCTGGGGGTACTGGGCCAGC‑CCTGGCGAGGCGCGGTAGTAGCTGCGCAAGGCTTGGGCATACTGGCTGCCGACCca                                                                                                                                          <  8:40209/149‑1 (MQ=255)                      tAAAGCCTGCGAATGTGCCGTTTGGCCTGCGGGTAGCGGTTGTCCTGTAGCAGGTCGGCCAGATCCTGGGGGTACTGGGCCAGC‑CCTGGCGAGGCGCGGTAGTAGCTGCGCAAGGCTTGGGCATACTGGCTGCCGACCCACAGCAACTg                                                                                                                                 >  2:211764/1‑149 (MQ=255)                        aaGCCTGCGAATGTGCCGTTTGGCCTGCGGGTAGCGGTTGTCCTGTAGCAGGTCGGCCAGATCCTGGGGGTACTGGGCCAGC‑CCTGGCGAGGCGCGGTAGTAGCTGCGCAAGGCTTGGGCATACTGGCTGCCGACCCACAGCAACTGGc                                                                                                                               <  8:251083/149‑1 (MQ=255)                          gCCTGCGAATGTGCCGTTTGGCCTGAGGGTAGCGGTTGTCCTGTAGCAGGTCGGCCAGATCCTGGGGGTACTGGGCCAGC‑CCTGGCGAGGCGCGATAGTAGCTGCGCAAGGCTTGGGCATAATGGCTGCCGACCCACAGCAACTGGCGt                                                                                                                             >  4:214785/1‑149 (MQ=255)                            cTGCGAATGTGCCGTTTGGCCTGCGGGTAGCGGTTGTCCTGTAGCAGGTCGGCCAGATCCTGGGGGTACTGGGCCAGC‑CCTGGCGAGGCGCGGTAGTAGCTGCGCAAGGCTTGGGCATACTGGCTGCCGACCCACAGCAACTGGCGTTc                                                                                                                           <  1:211764/149‑1 (MQ=255)                             tGCGAATGTGCCGTTTGGCCTGCGGGTAGCGGTTGTCCTGTAGCAGGTCGGCCAGATCCTGGGGGTACTGGGCCCGC‑CCTGGCGAGGCGCGGTAGTAGCTGCGCAAGGCTTGGGCAGACTGGCTGCCGACCCCCAGCAACTGGCGTTcg                                                                                                                          >  6:4413/1‑149 (MQ=255)                               cGAATGTGCCGTTTGGCCTGCGGGTAGCGGTTGTCCTGTAGCAGGTCGGCCAGATCCTGGGGGTACTGGGCCAGC‑CCTGGCGAGGCGCGGTAGTAGCTGCGCAAGGCTTGGGCATACTGGCTGCCGACCCACAGCAACTGGCGTTcg                                                                                                                          <  1:207155/147‑1 (MQ=255)                                 aagagcggtgccacagggagggcgcgtgatggcagcctcttcgctgaatggtaaggccaacggcggctttacatacctgggggtgctgctgctgattgcggtcagcagcgtggccCTGGc                                                                                                                                                    >  5:52100‑M1/116‑120 (MQ=255)                                 aagagcggtgccacagggagggcgcgtgatggcagcctcttcgctgaatggtaaggccaacggcggctttacatacctgggggtgctgctgctgattgcggtcagcagcgtggccCTGGc                                                                                                                                                    <  6:52100‑M1/5‑1 (MQ=255)                                      gCCGTTTGGCCTGCGGGTAGCGGTTGTCCTGTAGCAGGTCGGCCAGATCCTGGGGGTACTGGGCCAGC‑CCTGGCGAGGCGCGGTAGTAGCTGCGCAAGGCTTGGGCATACTGGCTGCCGACCCACAGCAACTGGCGTTCGCGGTCgcgc                                                                                                                 >  3:345618/1‑149 (MQ=255)                                              gCCTGCGGGTAGCGGTTGTCCTGTAGCAGGTCGGCCAGATCCTGGGGGTACTGGGCCAGC‑CCTGGCGAGGCGCGGTAGTAGCTGCGCAAGGCTTGGGCATACTGGCTGCCGACCCACAGCAACTGGCGTTCGCGGTCGCGCTGggcgag                                                                                                         >  3:112808/1‑147 (MQ=255)                                                     ggTAGCGGTTGTCCTGTAGCAGGTCGGCCAGATCCTGGGGGTACTGGGCCAGC‑CCTGGCGAGGCGCGGTAGTAGCTGCGCAAGGCTTGGGCATACTGGCTGc                                                                                                                                                 >  7:262598/1‑102 (MQ=255)                                                     ggTAGCGGTTGTCCTGTAGCAGGTCGGCCAGATCCTGGGGGTACTGGGCCAGC‑CCTGGCGAGGCGCGGTAGTAGCTGCGCAAGGCTTGGGCATACTGGCTGc                                                                                                                                                 <  8:262598/102‑1 (MQ=255)                                                         gCGGTTGTCCTGTAGCAGGTCGGCCAGATCCTGGGGGTACTGGGCCAGC‑CCTGGCGAGGCGCGGTAGTAGCTGCGCAAGGCTTGGGCATACTGGCTGCCGACCCACAGCAACTGGCGTTCGCGGTCGCGCTGGGCGAGCGC‑CGCCCAg                                                                                              <  4:112808/148‑1 (MQ=255)                                                         gCGGTTGTCCTGTAGCAGGTCGGCCAGATCCTGGGGGTACTGGGCCAGC‑CCTGGCGAGGCGCGGTAGTAGCTGCGCAAGGCTTGGGCATACTGGCTGCCGACCCACAGCAACTGGCGTTCGCGGTCGCGCTGGGCG‑GCGCTCGCCCAg                                                                                              <  5:168748/148‑1 (MQ=255)                                                          cGGTTGTCCTGTAGCAGGTCGGCCAGATCGTGGGGGTACTGGGCCAGC‑CCTGGGGAGGCGCGGTAGTAGCTGCGCAAGGCTTGGGCATACTGGCTGCCGACCCACAGCAACTGGCGTTCGCGGTCGCGCTGGGCG‑GCGCTCGCCCAGAt                                                                                            <  4:281496/149‑1 (MQ=255)                                                             ttGTCCTGTAGCAGGTCGGCCAGATCCTGGGGGTACTGGGCCAGC‑CCTGGCGAGGCGCGGTAGTAGCTGCGCAAGGCTTGGGCATACTGGCTGCCGACCCACAGCAACTGGCGTTCGCGGTCGCGCTGGGCG‑GCGCTCGCCCAGATCGt                                                                                         >  5:165563/1‑149 (MQ=255)                                                                  cTGTAGCAGGTCGGCCAGATCCTGGGGGTACTGGGCCAGC‑CCTGGCGAGGCGCGGTAGTAGCTGCGCAAGGCTTGGGCATACTGGCTGCCGACCCACAGCAACTGGCGTTCGCGGTCGCGCTGGGCG‑GCGCTCGCCCAGATCGTGCCgg                                                                                    >  8:233740/1‑149 (MQ=255)                                                                     tAGCAGGTCGGCCAGATCCTGGGGGTACTGGGCCAGC‑CCTGGCGAGGCGCGGTAGTAGCTGCGCAAGGCTTGGGCATACTGGCTGCCGACCCACAGCAACTGGCGTTCGCGGTCGCGCTGGGCG‑GCGCTCGCCCAGATCGTGCCGGt                                                                                   <  6:192098/147‑1 (MQ=255)                                                                         aGGTCGGCCAGATCCTGGGGGTACTGGGCCAGC‑CCTGGCGAGGCGCGGTAGTAGCTGCGCAAGGCTTGGGCATACTGGCTGCCGACCCACAGCAACTGGCGTTCGCGGTCGCGCTGGGCG‑GCGCTCGCCCAGATCGTGCCGGTGgccgc                                                                             <  4:51445/149‑1 (MQ=255)                                                                          ggTCGGCCAGATCCTGGGGGTACTGGGCCAGC‑CCTGGCGAGGCGCGGTAGTAGCTGCGCAAGGCTTGGGCATACTGGCTGCCGACCCACAGCAACTGGCGTTCGCGGTCGCGCTGGGCG‑GCGCTCGCCCAGATCGTGCCGGTGgccgc                                                                             >  4:181032/1‑148 (MQ=255)                                                                            tCGGCCAGATCCTGGGGGTACTGGGCCAGC‑CCTGGCGAGGCGCGGTAGTAGCTGCGCAAGGCTTGGGCATACTGGCTGCCGACCCACAGCAACTGGCGTTCGCGGTCGCGCTggg                                                                                                             >  3:143242/1‑115 (MQ=255)                                                                            tCGGCCAGATCCTGGGGGTACTGGGCCAGC‑CCTGGCGAGGCGCGGTAGTAGCTGCGCAAGGCTTGGGCATACTGGCTGCCGACCCACAGCAACTGGCGTTCGCGGTCGCGCTggg                                                                                                             <  4:143242/115‑1 (MQ=255)                                                                               gCCAGATCCTGGGGGTACTGGGCCAGCTCCTGGCGAGGCGCGGTAGTAGCTGCGCAAGGCTTGGGCATACTGGCTGCCGACCCACAGCAACTGGCGTTCGCGGTCGCGCTGGGCG‑GCGCTCGCCCAGATCGTGCCGGTGGCCGCCAggg                                                                        >  1:193520/1‑149 (MQ=255)                                                                               aatggtagggccaacggcggctttacatacctgggggtgctgctgctgattgcggtcagcagcgtggccCTGGCTGCCGACCCACAGCAACTGGCGTTCGCGGTCGCGCTGGGCG‑GCGCTCGCCCAGATCGTGCCGGTGGCCGCCAgg                                                                         >  2:314723‑M1/70‑148 (MQ=255)                                                                                 cAGATCCTGGGGGTACTGGGCCAGC‑CCTGGCGAGGCGCGGTAGTAGCTGCGCAAGGCTTGGGCATACTGGCTGCCGACCCACAGCAACTGGCGTTCGCGGTCGCGCTGGGCG‑GCGCTCGCCCAGATCGt                                                                                         >  6:84447/1‑129 (MQ=255)                                                                                 cAGATCCTGGGGGTACTGGGCCAGC‑CCTGGCGAGGCGCGGTAGTAGCTGCGCAAGGCTTGGGCATACTGGCTGCCGACCCACAGCAACTGGCGTTCGCGGTCGCGCTGGGCG‑GCGCTCGCCCAGATCGt                                                                                         <  5:84447/129‑1 (MQ=255)                                                                                    taaggccaacggcggctttacatacctgggggtgctgctgctgattgcggtcagcagcgtggccCTGGCTGCCGACCCACAGCAACTGGCGTTCGCGGTCGCGCTGGGCG‑GCGCTCGCCCAGATCGTGCCGGTGGCCGCCAg                                                                          >  3:98288‑M1/65‑142 (MQ=255)                                                                                    taaggccaacggcggctttacatacctgggggtgctgctgctgattgcggtcagcagcgtggccCTGGCTGCCGACCCACAGCAACTGGCGTTCGCGGTCGCGCTGGGCG‑GCGCTCGCCCAGATCGTGCCGGTGGCCGCCAg                                                                          <  4:98288‑M1/78‑1 (MQ=255)                                                                                      ccTGGGGGTACTGGGCCAGC‑CCTGGCGAGGCGCGGTAGTAGCTGCGCAAGGCTTGGGCATACTGGCTGCCGACCCACAGCAACTGGCGTTCGCGGTCGCGCTGGGCG‑GCGCTCGc                                                                                                  >  2:294689/1‑115 (MQ=255)                                                                                      ccTGGGGGTACTGGGCCAGC‑CCTGGCGAGGCGCGGTAGTAGCTGCGCAAGGCTTGGGCATACTGGCTGCCGACCCACAGCAACTGGCGTTCGCGGTCGCGCTGGGCG‑GCGCTCGc                                                                                                  <  1:294689/115‑1 (MQ=255)                                                                                       cTGGGGGTACTGGGCCAGC‑CCTGGCGAGGCGCGGTAGTAGCTGCGCAAGGCTTGGGCATACTGGCTGCCGACCCACAGCAACTGGCGTTCGCGGTCGCGCTGGGCG‑GCGCTCGCCCAGATCGTGCCGGTGGCCGCCAGGGCCACgctgc                                                               <  6:165563/149‑1 (MQ=255)                                                                                        tGGGGGTACTGGGCCAGC‑CCTGGCGAGGCGCGGTAGTAGCTGCGCAAGGCTTGGGCATACTGGCTGCCGACCCACAGCAACTGGCGTTCGCGGTCGCGCTGGGCG‑GCGCTCGCCCAGATCGTGCCGGTGGCCGCCAGGGCCACgctgct                                                              >  2:188297/1‑149 (MQ=255)                                                                                          ggggTACTGGGCCAGC‑CCTGGCGAGGCGCGGTAGTAGCTGCGCAAGGCTTGGGCATACTGGCTGCCGACCCACAGCAACTGGCGTTCGCGGTCGCGCTGGGCG‑GCGCTCGCCCAGATCGTGCCGGTGGCCGCCAGGGCCACGCTGCTGa                                                            <  7:233740/149‑1 (MQ=255)                                                                                          ggggTACTGGGCCAGC‑CCTGGCGAGGCGCGGTAGTAGCTGCGCAAGGCTTGGGCATACTGGCTGCCGACCCACAGCAACTGGCGTTCGCGGTCGCGCTGGGCG‑GCGCTCGCCCAGATCGTGCCGGTGGCCGCCAGGGCCACGCTGCTGa                                                            <  5:73646/149‑1 (MQ=255)                                                                                          ggggTACTGGGCCAGC‑CCTGGCGAGGCGCGATAGTAGCTGCGCAAGGCTTGGGCATACTGGCTGCCGACCCACAGCAACTGGCGTTCGCGGTCGCGCTGGGCG‑GCGCTCGCCCAGATCGTGCCGGTGGCCGCCAGGGCCACGCTGCTGa                                                            <  3:214785/149‑1 (MQ=255)                                                                                            ggTACTGGGCCAGC‑CCTGGCGAGGCGCGGTAGTAGCTGCGCAAGGCTTGGGCATACTGGCTGCCGACCCACAGCAACTGGCGTTCGCGGTCGCGCTGGGCG‑GCGCTCGCCCAGATCGTGCCGGt                                                                                   <  4:118744/124‑1 (MQ=255)                                                                                            ggTACTGGGCCAGC‑CCTGGCGAGGCGCGGTAGTAGCTGCGCAAGGCTTGGGCATACTGGCTGCCGACCCACAGCAACTGGCGTTCGCGGTCGCGCTGGGCG‑GCGCTCGCCCAGATCGTGCCGGt                                                                                   >  3:118744/1‑124 (MQ=255)                                                                                                 tGGGCCAGC‑CCTGGCGAGGCGCGGTAGTAGCTGCGCAAGGCTTGGGCATACTGGCTGCCGACCCACAGCAACTGGCGTTCGCGGTCGCGCTGGGCG‑GCGCTCGCCCAGATCGTGCCGGTGGCCGCCAGGGCCACGCTGCTGA‑CCGCAAt                                                    >  1:100628/1‑149 (MQ=255)                                                                                                    gCCAGC‑CCTGGCGAGGCGCGGTAGTAGCTGCGCAAGGCTTGGGCATACTGGCTGCCGACCCACAGCAACTGGCGTTCGCGGTCGCGCTGGGCG‑GCGCTCGCCCAGATCGTGCCGGTGGCCGCCAGGGCCACGCTGCTGA‑CCGCAATcag                                                 <  4:345618/149‑1 (MQ=255)                                                                                                        gC‑CCTGGCGAGGCGCGGTAGTAGCTGCGCAAGGCTTGGGCATACTGGCTGCCGACCCACAGCAACTGGCGTTCGCGGTCGCGCTGGGCG‑GCGCTCGCCCAGATCGTGCCGGTGGCCGCCAGGGCCACGCTGCTGA‑CCGCAATcagcagc                                             <  1:5270/149‑1 (MQ=255)                                                                                                             tGGCGAGGCGCGGTAGTAGCTGCGCAAGGCTTGGGCATACTGGCTGCCGACCCACAGCAACTGGCGTTCGCGGTCGCGCTGGGCG‑GCGCTCGCCCAGATCGTGCCGGTGGCCGCCAGGGCCACGCTGCTGA‑CCGCAATCAgcagcagca                                         >  8:81634/1‑149 (MQ=255)                                                                                                               gCGAGGCGCGGTAGTAGCTGCGCAAGGCTTGGGCATACTGGCTGCCGACCCACAGCAACTGGCGTTCGCGGTCGCGCTGGGCG‑GCGCTCGCCCAGATCGTGCCGGTGGCCGCCAGGGCCACGCTGCTGA‑CCGCAATCAgcagcagca                                         >  2:345988/1‑147 (MQ=255)                                                                                                               gCGAGGCGCGGTAGTAGCTGCGCAAGGCTTGGGCATACTGGCTGCCGACCCACAGCAACTGGCGTTCGCGGTCGCGCTGGGCG‑GCGCTCGCCCAGATCGTGCCGGTGGCCGCCAGGGCCACGCTGCTGA‑CCGCAATCAgcagcagca                                         <  1:345988/147‑1 (MQ=255)                                                                                                                   ggCGCGGTAGTAGCTGCGCAAGGCTTGGGCATACTGGCTGCCGACCCACAGCAACTGGCGTTCGCGGTCGCGCTGGGCG‑GCGCTCGCCCAGATCGTGCCGGTGGCCGCCAGGGCCACGCTGCTGA‑CCGCAATCAGCAGCAGCAcccc                                     >  2:362263/1‑147 (MQ=255)                                                                                                                      gcgGTAGTAGCTGCGCAAGGCTTGGGCATACTGGCTGCCGACCCACAGCAACTGGCGTTCGCGGTCGCGCTGGGCG‑GCGCTCGCCCAGATCGTGCCGGTGGCCGCCAGGGCCACGCTGCTGA‑CCGCAATCAGCAGCAGCACCCCCAGGt                                <  5:4413/149‑1 (MQ=255)                                                                                                                      gcgGTAGTAGCTGCGCAAGGCTTGGGCATACTGGCTGCCGACCCACAGCAACTGGCGTTCCCGGTCGCGCTGGGCG‑GCGCTCGCCCAGTTCGTGCCGGTGGCCGCCATGGCCACGGTGCTGACCCGCAATCAGCAGCAGCACCCCCAgg                                 <  1:188297/149‑1 (MQ=255)                                                                                                                                   cgcAAGGCTTGGGCATACTGGCTGCCGACCCACAGCAACTGGCGTTCGCGGTCGCGCTGGGCG‑GCGCTCGCCCAGATCGTGCCGGTGGCCGCCAGGGCCACGCTGCTGA‑CCGCAATCAGCAGCAGCACCCCCAGGTATGTAAAgccgcc                   >  8:186305/1‑149 (MQ=255)                                                                                                                                    gcAAGGCTTGGGCATACTGGCTGCCGACCCACAGCAACTGGCGTTCGCGGTCGCGCTGGGCG‑GCGCTCGCCCAGATCGTGCCGGTGGCCGCCAGGGCCACGCTGCTGA‑CCGCAATCAGCAGCAGCACCCCCAGGTATGTAAAGccgccg                  >  8:101993/1‑149 (MQ=255)                                                                                                                                         gCTTGGGCATACTGGCTGCCGACCCACAGCAACTGGCGTTCGCGGTCGCGCTGGGCG‑GCGCTCGCCCAGATCGTGCCGGTGGCCGCCAGGGCCACGCTGCTGA‑CCGCAATCAGCAGCAGCACCCCCAGGTATGTAAAGCCGCCGTTGGc             <  2:193520/149‑1 (MQ=255)                                                                                                                                           ttGGGCATACTGGCTGCCGACCCACAGCAACTGGCGTTCGCGGTCGCGCTGGGCG‑GCGCTCGCCCAGATCGTGCCGGTGGCCGCCAGGGCCACGCTGCTGA‑CCGCAATCAGCAGCAGCACCCCCAGGTATGTAAAGCCGCCGTTGGCCt           >  4:34780/1‑149 (MQ=255)                                                                                                                                             gggCATACTGGCTGCCGACCCACAGCAACTGGCGTTCGTGGTCGCGCTGGGCG‑GCGCTCGCCCAGATCGTGCCGGTGGCCGCCAGGGCCACGCTGCTGA‑CCGCAATCAGCAGCAGCACCCCCAGGTATGTAAAGCCGCCGTTGGCCTTa         >  6:57959/1‑149 (MQ=255)                                                                                                                                               gCATACTGGCTGCCGACCCACAGCAACTGGCGTTCGCGGTCGCGCTGGGCG‑GCGCTCGCCCAGATCGTGCCGGTGGCCGCCAGGGCCACGCTGCTGA‑TTGCGGTcagcagcgtgg                                         <  4:46481/115‑5 (MQ=255)                                                                                                                                               gCATACTGGCTGCCGACCCACAGCAACTGGCGTTCGCGGTCGCGCTGGGCG‑GCGCTCGCCCAGATCGTGCCGGTGGCCGCCAGGGCCACGCTGCTGA‑TTGCGGTcagcagcgtgg                                         >  3:46481/1‑111 (MQ=255)                                                                                                                                                 aTACTGGCTGCCGACCCACAGCAACTGGCGTTCGCGGTCGCGCTGGGCG‑GCGCTCGCCCAGATCGTGCCGGTGGCCGCCAGGGCCACGCTGCTGA‑CCGCAATCAGCAGCAGCACCCCCAGGTATGTAAAGCCGCCGTTGGCCTTACCAt     <  3:181032/149‑1 (MQ=255)                                                                                                                                                    CTGGCTGCCGACCCACAGCAACTGGCGTTCGCGGTCGCGCTGGGCG‑GCGCTCGCCCAGATCGTGCCGGTGGCCGCCAGGGCCACGCTGCTGA‑CCGCAATCAGCAGCAGCACCCCCAGGTATGTAAAGCCGCCGTTGGCCTTACCATTCa  >  3:34780‑M1/1‑149 (MQ=255)                                                                                                                                                    CTGGCTGCCGACCCACAGCAACTGGCGTTCGCGGTCGCGCTGGGCG‑GCGCTCGCCCAGATCGTGCCGGTGGCCGCCAGGGCCACGCTGCTGA‑CCGCAATCAGCAGCAGCACCCCCAGGTATGTAAAGCCGCCGTTGGCCTTACCATTCa  >  2:100628‑M1/1‑149 (MQ=255)                                                                                                                                                    |                                                                                                                                                       CTGTTGCTGATCGGGTCAGGGTAAAGCCTGCGAATGTGCCGTTTGGCCTGCGGGTAGCGGTTGTCCTGTAGCAGGTCGGCCAGATCCTGGGGGTACTGGGCCAGC‑CCTGGCGAGGCGCGGTAGTAGCTGCGCAAGGCTTGGGCATACTGGCTGCCGACCCACAGCAACTGGCGTTCGCGGTCGCGCTGGGCG‑GCGCTCGCCCAGATCGTGCCGGTGGCCGCCAGGGCCACGCTGCTGA‑CCGCAATCAGCAGCAGCACCCCCAGGTATGTAAAGCCGCCGTTGGCCTTACCATTCA  >  NC_002947/3940886‑3941180

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.