New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	3941032 =	48 (0.850)	3 (0.060)	3/250	NT	5.9%	coding (168/531 nt)	PP_3475	type II secretion system pseudopilin PulG‑like signal peptide protein
	?	NC_002947	3941110 =	49 (0.900)					coding (90/531 nt)	PP_3475	type II secretion system pseudopilin PulG‑like signal peptide protein

GCCAGATCCTGGGGGTACTGGGCCAGC‑CCTGGCGAGGCGCGGTAGTAGCTGCGCAAGGCTTGGGCATACTGGCTGCCGACCCACAGCAACTGGCGTTCGCGGTCGCGCTGGGCG‑GCGCTCGCCCAGATCGTGCCGGTGGCCGCCAGGGCCACGCTGCTGA‑CCGCAATCAGCAGCAGCACCCCCAGGTATGTAAAGCCGCCGTTGGCCTTACCATTCAGCGAAGAGGCTGCCATCACGCGCCCTCCCTGTGGCACCGCTCTTGATGTCGGCCACGCCGCCCGCCACACCCTCGGGC  >  NC_002947/3940964‑3941258                                                                                                                                                     |                                                                                                                                                      gCCAGATCCTGGGGGTACTGGGCCAGCTCCTGGCGAGGCGCGGTAGTAGCTGCGCAAGGCTTGGGCATACTGGCTGCCGACCCACAGCAACTGGCGTTCGCGGTCGCGCTGGGCG‑GCGCTCGCCCAGATCGTGCCGGTGGCCGCCAggg                                                                                                                                                      >  1:193520/1‑149 (MQ=255) aatggtagggccaacggcggctttacatacctgggggtgctgctgctgattgcggtcagcagcgtggccCTGGCTGCCGACCCACAGCAACTGGCGTTCGCGGTCGCGCTGGGCG‑GCGCTCGCCCAGATCGTGCCGGTGGCCGCCAgg                                                                                                                                                       >  2:314723‑M1/70‑148 (MQ=255)         cTGGGGGTACTGGGCCAGC‑CCTGGCGAGGCGCGGTAGTAGCTGCGCAAGGCTTGGGCATACTGGCTGCCGACCCACAGCAACTGGCGTTCGCGGTCGCGCTGGGCG‑GCGCTCGCCCAGATCGTGCCGGTGGCCGCCAGGGCCACgctgc                                                                                                                                             <  6:165563/149‑1 (MQ=255)          tGGGGGTACTGGGCCAGC‑CCTGGCGAGGCGCGGTAGTAGCTGCGCAAGGCTTGGGCATACTGGCTGCCGACCCACAGCAACTGGCGTTCGCGGTCGCGCTGGGCG‑GCGCTCGCCCAGATCGTGCCGGTGGCCGCCAGGGCCACgctgct                                                                                                                                            >  2:188297/1‑149 (MQ=255)            ggggTACTGGGCCAGC‑CCTGGCGAGGCGCGGTAGTAGCTGCGCAAGGCTTGGGCATACTGGCTGCCGACCCACAGCAACTGGCGTTCGCGGTCGCGCTGGGCG‑GCGCTCGCCCAGATCGTGCCGGTGGCCGCCAGGGCCACGCTGCTGa                                                                                                                                          <  5:73646/149‑1 (MQ=255)            ggggTACTGGGCCAGC‑CCTGGCGAGGCGCGGTAGTAGCTGCGCAAGGCTTGGGCATACTGGCTGCCGACCCACAGCAACTGGCGTTCGCGGTCGCGCTGGGCG‑GCGCTCGCCCAGATCGTGCCGGTGGCCGCCAGGGCCACGCTGCTGa                                                                                                                                          <  7:233740/149‑1 (MQ=255)            ggggTACTGGGCCAGC‑CCTGGCGAGGCGCGATAGTAGCTGCGCAAGGCTTGGGCATACTGGCTGCCGACCCACAGCAACTGGCGTTCGCGGTCGCGCTGGGCG‑GCGCTCGCCCAGATCGTGCCGGTGGCCGCCAGGGCCACGCTGCTGa                                                                                                                                          <  3:214785/149‑1 (MQ=255)                   tGGGCCAGC‑CCTGGCGAGGCGCGGTAGTAGCTGCGCAAGGCTTGGGCATACTGGCTGCCGACCCACAGCAACTGGCGTTCGCGGTCGCGCTGGGCG‑GCGCTCGCCCAGATCGTGCCGGTGGCCGCCAGGGCCACGCTGCTGA‑CCGCAAt                                                                                                                                  >  1:100628/1‑149 (MQ=255)                      gCCAGC‑CCTGGCGAGGCGCGGTAGTAGCTGCGCAAGGCTTGGGCATACTGGCTGCCGACCCACAGCAACTGGCGTTCGCGGTCGCGCTGGGCG‑GCGCTCGCCCAGATCGTGCCGGTGGCCGCCAGGGCCACGCTGCTGA‑CCGCAATcag                                                                                                                               <  4:345618/149‑1 (MQ=255)                          gC‑CCTGGCGAGGCGCGGTAGTAGCTGCGCAAGGCTTGGGCATACTGGCTGCCGACCCACAGCAACTGGCGTTCGCGGTCGCGCTGGGCG‑GCGCTCGCCCAGATCGTGCCGGTGGCCGCCAGGGCCACGCTGCTGA‑CCGCAATcagcagc                                                                                                                           <  1:5270/149‑1 (MQ=255)                               tGGCGAGGCGCGGTAGTAGCTGCGCAAGGCTTGGGCATACTGGCTGCCGACCCACAGCAACTGGCGTTCGCGGTCGCGCTGGGCG‑GCGCTCGCCCAGATCGTGCCGGTGGCCGCCAGGGCCACGCTGCTGA‑CCGCAATCAgcagcagca                                                                                                                       >  8:81634/1‑149 (MQ=255)                                 gCGAGGCGCGGTAGTAGCTGCGCAAGGCTTGGGCATACTGGCTGCCGACCCACAGCAACTGGCGTTCGCGGTCGCGCTGGGCG‑GCGCTCGCCCAGATCGTGCCGGTGGCCGCCAGGGCCACGCTGCTGA‑CCGCAATCAgcagcagca                                                                                                                       <  1:345988/147‑1 (MQ=255)                                 gCGAGGCGCGGTAGTAGCTGCGCAAGGCTTGGGCATACTGGCTGCCGACCCACAGCAACTGGCGTTCGCGGTCGCGCTGGGCG‑GCGCTCGCCCAGATCGTGCCGGTGGCCGCCAGGGCCACGCTGCTGA‑CCGCAATCAgcagcagca                                                                                                                       >  2:345988/1‑147 (MQ=255)                                     ggCGCGGTAGTAGCTGCGCAAGGCTTGGGCATACTGGCTGCCGACCCACAGCAACTGGCGTTCGCGGTCGCGCTGGGCG‑GCGCTCGCCCAGATCGTGCCGGTGGCCGCCAGGGCCACGCTGCTGA‑CCGCAATCAGCAGCAGCAcccc                                                                                                                   >  2:362263/1‑147 (MQ=255)                                        gcgGTAGTAGCTGCGCAAGGCTTGGGCATACTGGCTGCCGACCCACAGCAACTGGCGTTCGCGGTCGCGCTGGGCG‑GCGCTCGCCCAGATCGTGCCGGTGGCCGCCAGGGCCACGCTGCTGA‑CCGCAATCAGCAGCAGCACCCCCAGGt                                                                                                              <  5:4413/149‑1 (MQ=255)                                        gcgGTAGTAGCTGCGCAAGGCTTGGGCATACTGGCTGCCGACCCACAGCAACTGGCGTTCCCGGTCGCGCTGGGCG‑GCGCTCGCCCAGTTCGTGCCGGTGGCCGCCATGGCCACGGTGCTGACCCGCAATCAGCAGCAGCACCCCCAgg                                                                                                               <  1:188297/149‑1 (MQ=255)                                                     cgcAAGGCTTGGGCATACTGGCTGCCGACCCACAGCAACTGGCGTTCGCGGTCGCGCTGGGCG‑GCGCTCGCCCAGATCGTGCCGGTGGCCGCCAGGGCCACGCTGCTGA‑CCGCAATCAGCAGCAGCACCCCCAGGTATGTAAAgccgcc                                                                                                 >  8:186305/1‑149 (MQ=255)                                                      gcAAGGCTTGGGCATACTGGCTGCCGACCCACAGCAACTGGCGTTCGCGGTCGCGCTGGGCG‑GCGCTCGCCCAGATCGTGCCGGTGGCCGCCAGGGCCACGCTGCTGA‑CCGCAATCAGCAGCAGCACCCCCAGGTATGTAAAGccgccg                                                                                                >  8:101993/1‑149 (MQ=255)                                                           gCTTGGGCATACTGGCTGCCGACCCACAGCAACTGGCGTTCGCGGTCGCGCTGGGCG‑GCGCTCGCCCAGATCGTGCCGGTGGCCGCCAGGGCCACGCTGCTGA‑CCGCAATCAGCAGCAGCACCCCCAGGTATGTAAAGCCGCCGTTGGc                                                                                           <  2:193520/149‑1 (MQ=255)                                                             ttGGGCATACTGGCTGCCGACCCACAGCAACTGGCGTTCGCGGTCGCGCTGGGCG‑GCGCTCGCCCAGATCGTGCCGGTGGCCGCCAGGGCCACGCTGCTGA‑CCGCAATCAGCAGCAGCACCCCCAGGTATGTAAAGCCGCCGTTGGCCt                                                                                         >  4:34780/1‑149 (MQ=255)                                                               gggCATACTGGCTGCCGACCCACAGCAACTGGCGTTCGTGGTCGCGCTGGGCG‑GCGCTCGCCCAGATCGTGCCGGTGGCCGCCAGGGCCACGCTGCTGA‑CCGCAATCAGCAGCAGCACCCCCAGGTATGTAAAGCCGCCGTTGGCCTTa                                                                                       >  6:57959/1‑149 (MQ=255)                                                                 gCATACTGGCTGCCGACCCACAGCAACTGGCGTTCGCGGTCGCGCTGGGCG‑GCGCTCGCCCAGATCGTGCCGGTGGCCGCCAGGGCCACGCTGCTGA‑TTGCGGTcagcagcgtgg                                                                                                                       >  3:46481/1‑111 (MQ=255)                                                                 gCATACTGGCTGCCGACCCACAGCAACTGGCGTTCGCGGTCGCGCTGGGCG‑GCGCTCGCCCAGATCGTGCCGGTGGCCGCCAGGGCCACGCTGCTGA‑TTGCGGTcagcagcgtgg                                                                                                                       <  4:46481/115‑5 (MQ=255)                                                                   aTACTGGCTGCCGACCCACAGCAACTGGCGTTCGCGGTCGCGCTGGGCG‑GCGCTCGCCCAGATCGTGCCGGTGGCCGCCAGGGCCACGCTGCTGA‑CCGCAATCAGCAGCAGCACCCCCAGGTATGTAAAGCCGCCGTTGGCCTTACCAt                                                                                   <  3:181032/149‑1 (MQ=255)                                                                      cctggcggccaccggcacgatctgggcgagcgccgcccagcgcgaccgcgaacgccagttgctgtgggtcggcagccagGGCCACGCTGCTGA‑CCGCAATCAGCAGCAGCACCCCCAGGTATGTAAAGCCGCCGTTGGCCCTACCAtt                                                                                  >  2:314723‑M2/80‑148 (MQ=255)                                                                      CTGGCTGCCGACCCACAGCAACTGGCGTTCGCGGTCGCGCTGGGCG‑GCGCTCGCCCAGATCGTGCCGGTGGCCGCCAGGGCCACGCTGCTGA‑CCGCAATCAGCAGCAGCACCCCCAGGTATGTAAAGCCGCCGTTGGCCTTACCATTCa                                                                                >  2:100628‑M1/1‑149 (MQ=255)                                                                      CTGGCTGCCGACCCACAGCAACTGGCGTTCGCGGTCGCGCTGGGCG‑GCGCTCGCCCAGATCGTGCCGGTGGCCGCCAGGGCCACGCTGCTGA‑CCGCAATCAGCAGCAGCACCCCCAGGTATGTAAAGCCGCCGTTGGCCTTACCATTCa                                                                                >  3:34780‑M1/1‑149 (MQ=255)                                                                       ctggcggccaccggcacgatctgggcgagcgccgcccagcgcgaccgcgaacgccagttgctgtgggtcggcagccagGGCCACGCTGCTGA‑CCGCAATCAGCAGCAGCACCCCCAGGTATGTAAAGCCGCCGTTGGCCTTa                                                                                       <  4:98288‑M2/64‑1 (MQ=255)                                                                       ctggcggccaccggcacgatctgggcgagcgccgcccagcgcgaccgcgaacgccagttgctgtgggtcggcagccagGGCCACGCTGCTGA‑CCGCAATCAGCAGCAGCACCCCCAGGTATGTAAAGCCGCCGTTGGCCTTa                                                                                       >  3:98288‑M2/79‑142 (MQ=255)                                                                        GGCTGCCGACCCACAGCAACTGGCGTTCGCGGTCGCGCTGGGCG‑GCGCTCGCCCAGATCGTGCCGGTGGCCGCCAGGGCCACGCTGCTGA‑CCGCAATCAGCAGCAGCACCCCCAGGTATGTAAAGCCGCCGTTGGCCTTACCATTCAGc                                                                              <  5:45556‑M1/149‑1 (MQ=255)                                                                              cGACCCACAGCAACTGGCGTTCGCGGTCGCGCTGGGCG‑GCGCTCGCCCAGATCGTGCCGGTGGCCGCCAGGGCCACGCTGCTGA‑CCGCAATCAGCAGCAGCACCCCCAGGTATGTAAAGCCGCCGTTGGCCTTACCATTCAGCGAagag                                                                        >  7:63275/1‑149 (MQ=255)                                                                              cGACCCACAGCAACTGGCGTTCGCGGTCGCGCTGGGCG‑GCGCTCGCCCAGATCGTGCCGGTGGCCGCCAGGGCCACGCTGCTGA‑CCGCAATCAGCAGCAGCACCCCCAGGTATGTAAAGCCGCCGTTGGCCTTACCATTCAGCGAagag                                                                        >  2:192264/1‑149 (MQ=255)                                                                               gACCCACAGCAACTGGCGTTCGCGGTCGCGCTGGGCG‑GCGCTCGCCCAGATCGTGCCGGTGGCCGCCAGGGCCACGCTGCTGA‑CCGCAATCAGCAGCAGCACCCCCAGGTATGTAAAGCCGCCGTTGGCCTTACCATTCAGCGAAGAgg                                                                       >  2:183130/1‑149 (MQ=255)                                                                                aCCCACAGCAACTGGCGTTCGCGGTCGCGCTGGGCG‑GCGCTCGCCCAGATCGTGCCGGTGGCCGCCAGGGCCACGCTGCTGA‑CCGCAATCAGCAGCAGCACCCCCAGGTATGTAAAGCCGCCGTTGGCCTTACCATTCAGCGAAGAGGc                                                                      >  4:257967/1‑149 (MQ=255)                                                                                  ccACAGCAACTGGCGTTCGCGGTCGCGCTGGGCG‑GCGCTCGCCCAGATCGTGCCGGTGGCCGCCAGGGCCACGCTGCTGA‑CCGCAATCAGCAGCAGCACCCCCAGGTATGTAAAGCCGCCGTTGGCCTTACCATTCAGCGAAGAGGCTg                                                                    <  1:183130/149‑1 (MQ=255)                                                                                     caGCAACTGGCGTTCGCGGTCGCGCTGGGCG‑GCGCTCGCCCAGATCGTGCCGGTGGCCGCCAGGGCCACGCTGCTGA‑CCGCAATCAGCAGCAGCACCCCCAGGTATGTAAAGCCGCCGTTGGCCTTACCATTCAGCGAAGAGGCTGCCa                                                                 >  8:82623/1‑149 (MQ=255)                                                                                           cTGGCGTTCGCGGTCGCGCTGGGCG‑GCGCTCGCCCAGATCGTGCCGGTGGCCGCCAGGGCCACGCTGCTGA‑CCGCAATCAGCAGCAGCACCCCCAGGTATGTAAAGCCGCCGTTGGCCTTACCATTCAGCGAAGAGGCTGCCATCAcgc                                                           <  7:82623/149‑1 (MQ=255)                                                                                           cTGGCGTTCGCGGTCGCGCTGGGCG‑GCGCTCGCCCAGATCGTGCCGGTGGCCGCCAGGGCCACGCTGCTGA‑CCGCAATCAGCAGCAGCACCCCCAGGTATGTAAAGCCGCCGTTGGCCTTACCATTCAGCGAAGAGGCTGCCATCAcgc                                                           >  5:216684/1‑149 (MQ=255)                                                                                                gTTCGCGGTCGCGCTGGGCG‑GCGCTCGCCCAGATCGTGCCGGTGGCCGCCAGGGCCACGCTGCTGA‑CCGCAATCAGCAGCAGCACCCCCAGGTATGTAAAGCCGCCGTTGGCCTTACCATTc                                                                                 <  1:16612/122‑1 (MQ=255)                                                                                                gTTCGCGGTCGCGCTGGGCG‑GCGCTCGCCCAGATCGTGCCGGTGGCCGCCAGGGCCACGCTGCTGA‑CCGCAATCAGCAGCAGCACCCCCAGGTATGTAAAGCCGCCGTTGGCCTTACCATTc                                                                                 >  2:16612/1‑122 (MQ=255)                                                                                                    gtggTCGCGCTGGGCG‑GCGCTCGCCCAGATCGTGCCGGTGGCCGCCAGGGCCACGCTGCTGA‑CCGCAATCAGCAGCAGCACCCCCAGGTATGTAAAGCCGCCGTTGGCCTTACCATTCAGCGAAGAGGCTGCCATCACGCGccctccct                                                  <  5:57959/147‑1 (MQ=255)                                                                                                      ggTCGCGCTGGGCG‑GCGCTCGCCCAGATCGTGCCGGTGGCCGCCAGGGCCACGCTGCTGA‑CCGCAATCAGCAGCAGCACCCCCAGGTATGTAAAGCCGCCGTTGGCCTTACCATTCAGCGAAGAGGCTGCCATCACGCGCCCTCCCtgt                                                <  7:81634/149‑1 (MQ=255)                                                                                                          gatcTGGGCGAGCGC‑CGCCCAGATCGTGCCGGTGGCCGCCAGGGCCACGCTGCTGA‑CCGCAATCAGCAGCAGCACCCCCAGGTATGTAAAGCCGCCGTTGGCCTTACCATTCAGCGAAGAGGCTGCCATCACGCGCCCTCCCTGTGGCa                                            >  4:73985/4‑149 (MQ=255)                                                                                                            tcTGGGCGAGCGC‑CGCCCAGATCGTGCCGGTGGCCGCCAGGGCCACGCTGCTGA‑CCGCAATCAGCAGCAGCACCCCCAGGTATGTAAAGCCGCCGTTGGCCTTACCATTCAGCGAAGAGGCTGCCATCACGCGCCCTCCCTGTGGCAcc                                          >  1:228363/2‑149 (MQ=255)                                                                                                            gcTGGGCG‑GCGCTCGCCCAGATCGTGCCGGTGGCCGCCAGGGCCACGCTGCTGA‑CCGCAATCAGCAGCAGCACCCCCAGGTATGTAAAGCCGCCGTTGGCCTTACCATTCAGCGAAGAGGCTGCCATCACGCGCCCTCCCtg                                                 <  4:330391/142‑1 (MQ=255)                                                                                                            gcTGGGCG‑GCGCTCGCCCAGATCGTGCCGGTGGCCGCCAGGGCCACGCTGCTGA‑CCGCAATCAGCAGCAGCACCCCCAGGTATGTAAAGCCGCCGTTGGCCTTACCATTCAGCGAAGAGGCTGCCATCACGCGCCCTCCCtg                                                 >  3:330391/1‑142 (MQ=255)                                                                                                            gcTGGGCG‑GCGCTCGCCCAGATCGTGCCGGTGGCCGCCAGGGCCACGCTGCTGA‑CCGCAATCAGCAGCAGCACCCCCAGGTATGTAAAGCCGCCGTTGGCCTTACCATTCAGCGAAGAGGCTGCCATCACGCGCCCTCCCTGTGGCAcc                                          >  3:156936/1‑149 (MQ=255)                                                                                                                 gcg‑gcgCTCGCCCAGATCGTGCCGGTGGCCGCCAGGGCCACGCTGCTGA‑CCGCAATCAGCAGCAGCACCCCCAGGTATGTAAAGCCGCCGTTGGCCTTACCATTCAGCGAAGAGGCTGCCATCACGCGCCCTCCCTGTGGCACCGctct                                     >  3:141359/1‑149 (MQ=255)                                                                                                                      cgcTCGCCCAGATCGTGCCGGTGGCCGCCAGGGCCACGCTGCTGA‑CCGCAATCAGCAGCAGCACCCCCAGGTATGTAAAGCCGCCGTTGGCCTTACCATTCAGCGAAGAGGCTGCCATCACGCGCCCTCCCTGTGGCACCGCTCTTGAt                                 <  1:362263/149‑1 (MQ=255)                                                                                                                               aGATCGTGCCGGTGGCCGCCAGGGCCACGCTGCTGA‑CCGCAATCAGCAGCAGCACCCCCAGGTATGTAAAGCCGCCGTTGGCCTTACCATTCAGCGAAGAGGCTGCCATCACGCGCCCTCCCTGTGGCACCGCTCTTGATGTCGGCCAc                        <  1:192264/149‑1 (MQ=255)                                                                                                                                        cGGTGGCCGCCAGGGCCACGCTGCTGA‑CCGCAATCAGCAGCAGCACCCCCAGGTATGTAAAGCCGCCGTTGGCCTTACCATTCAGCGAAGAGGCTGCCATCACGCGCCCTCCCTGTGGCAc                                           <  6:5885/121‑1 (MQ=255)                                                                                                                                        cGGTGGCCGCCAGGGCCACGCTGCTGA‑CCGCAATCAGCAGCAGCACCCCCAGGTATGTAAAGCCGCCGTTGGCCTTACCATTCAGCGAAGAGGCTGCCATCACGCGCCCTCCCTGTGGCAc                                           >  5:5885/1‑121 (MQ=255)                                                                                                                                        cGGTGGCCGCCAGGGCCACGCTGCTGA‑CCGCAATCAGCAGCAGCACCCCCAGGTATGTAAAGCCGCCGTTGGCCTTACCATTCAGCGAAGAGGCTGCCATCACGCGCCCTCCCTGTGGCACCGCTCTTGAt                                 <  6:329646/131‑1 (MQ=255)                                                                                                                                        cGGTGGCCGCCAGGGCCACGCTGCTGA‑CCGCAATCAGCAGCAGCACCCCCAGGTATGTAAAGCCGCCGTTGGCCTTACCATTCAGCGAAGAGGCTGCCATCACGCGCCCTCCCTGTGGCACCGCTCTTGAt                                 >  5:329646/1‑131 (MQ=255)                                                                                                                                        cGGTGGCCGCCAGGGCCACGCTGCTGA‑CCGCAATCAGCAGCAGCACCCCCAGGTATGTAAAGCCGCCGTTGGCCTTACCATTCAGCGAAGAGGCTGCCATCACGCGCCCTCCCTGTGGCACCGCTCTTGATGTCGGCCACGccgcccgc               >  3:330528/1‑149 (MQ=255)                                                                                                                                        cGGTGGCCGCCAGGGCCACGCTGCTGA‑CCGCAATCAGCAGCAGCACCCCCAGGTATGAAAAGCCGCCGTTGGCCTTACCATTCAGCGAAGAGGCTGCCATCACGCGCCCTCCCTGTGGCACCGCTCTTGAt                                 >  7:196377/1‑131 (MQ=255)                                                                                                                                        cGGTGGCCGCCAGGGCCACGCTGCTGA‑CCGCAATCAGCAGCAGCACCCCCAGGTATGAAAAGCCGCCGTTGGCCTTACCATTCAGCGAAGAGGCTGCCATCACGCGCCCTCCCTGTGGCACCGCTCTTGAt                                 <  8:196377/131‑1 (MQ=255)                                                                                                                                               cgccAGGGCCACGCTGCTGA‑CCGCAATCAGCAGCAGCACCCCCAGGTATGTAAAGCCGCCGTTGGCCTTACCATTCAGCGAAGAGGCTGCCATCACGCGCCCTCCCTGTGGCACCGCTCTTGATGTCGGCCACGCCGCCCGCCACAccc        >  3:184877/1‑149 (MQ=255)                                                                                                                                                gccagGGCCACGCTGCTGA‑CCGCAATCAGCAGCAGCACCCCCAGGTATGTAAAGCCGCCGTTGGCCTTACCATTCAGCGAAGAGGCTGCCATCACGCGCCCTCCCTGTGGCACCGCTCtt                                    <  6:52100‑M2/115‑1 (MQ=255)                                                                                                                                                gccagGGCCACGCTGCTGA‑CCGCAATCAGCAGCAGCACCCCCAGGTATGTAAAGCCGCCGTTGGCCTTACCATTCAGCGAAGAGGCTGCCATCACGCGCCCTCCCTGTGGCACCGCTCtt                                    >  5:52100‑M2/6‑120 (MQ=255)                                                                                                                                                     ggCCACGCTGCTGA‑CCGCAATCAGCAGCAGCACCCCCAGGTATGTAAAGCCGCCGTTGGCCTTACCATTCAGCGAAGAGGCTGCCATCACGCGCCCTCCCTGTGGCACCGCTCTTGATGTCGGCCACGCCGCCCGCCACACCCTCGggc  <  4:156936/149‑1 (MQ=255)                                                                                                                                                     |                                                                                                                                                      GCCAGATCCTGGGGGTACTGGGCCAGC‑CCTGGCGAGGCGCGGTAGTAGCTGCGCAAGGCTTGGGCATACTGGCTGCCGACCCACAGCAACTGGCGTTCGCGGTCGCGCTGGGCG‑GCGCTCGCCCAGATCGTGCCGGTGGCCGCCAGGGCCACGCTGCTGA‑CCGCAATCAGCAGCAGCACCCCCAGGTATGTAAAGCCGCCGTTGGCCTTACCATTCAGCGAAGAGGCTGCCATCACGCGCCCTCCCTGTGGCACCGCTCTTGATGTCGGCCACGCCGCCCGCCACACCCTCGGGC  >  NC_002947/3940964‑3941258

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.