New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	4020885 =	49 (0.860)	3 (0.060)	3/250	NT	6.4%	coding (1596/2067 nt)	PP_3546	two‑component system sensor histidine kinase/response regulator
	?	NC_002947	4020924 =	40 (0.730)					coding (1635/2067 nt)	PP_3546	two‑component system sensor histidine kinase/response regulator

GTAGCGGCATGTCGGCTGAAGTTGTCGAGCGCGCAGTCGAGCCGTTCTTCACCACCAAGCCGATGGGCCAGGGTACCGGCCTGGGTCTGTCCATGACCTATGGCTTCGTGCGGCAGTCGGGTGGGCAATTACGGGTGCTGTCGGTGCCTGGCGAGGGTACCCGCATCGAGCTGCTGTTACCCCGCCACCACGAGCAAGCCCAGGCGCCAATCAGCAAACCTCCGCGCACGCTCTTGCAAAGAAGCAGCGAGGCTGCAAAACGCATTCTGTTGGTTGAAGACCAGACGGCCTTGCGCC  >  NC_002947/4020737‑4021033                                                                                                                                                     |                                                                                                                                                     ccgatagcccagctcttccaacacttcgccaatcaccaggcgcaaggccgtctggtcttcaaccaacagaatgcgttttgcagcctcgctgcttctttgcaagagcgtgcgcggaggtttgctgattggcgcctgggcttgctcgtggt                                                                                                                                                      <  5:188422‑M1/1‑1 (MQ=255)  cgatagcccagctcttccaacacttcgccaatcaccaggcgcaaggccgtctggtcttcaaccaacagaatgcgttttgcagcctcgctgcttctttgcaagagcgtgcgcggaggtttgctgattggcgcctgggcttgctcgtggtg                                                                                                                                                     >  7:138934‑M1/148‑149 (MQ=255)   gatagcccagctcttccaacacttcgccaatcaccaggcgcaaggccgtctggtcttcaaccaacagaatgcgttttgcagcctcgctgcttctttgcaagagcgtgcgcggaggtttgctgattggcgcctgggcttgctcgtggtgg                                                                                                                                                    <  4:162702‑M1/3‑1 (MQ=255)   gatagcccagctcttccaacacttcgccaatcaccaggcgcaaggccgtctggtcttcaaccaacagaatgcgttttgcagcctcgctgcttctttgcaagagcgtgcgcggaggtttgctgattggcgcctgggcttgctcgtggtgg                                                                                                                                                    <  1:97298‑M1/3‑1 (MQ=255)    gCGGCATGTCGGCTGAAGTTGTCGAGCGCGCAGTCGAGCCGTTCTTCACCACCAAGCCGATGGGCCAGGGTACCGGCCTGGGTCTGTCCATGACCTATGGCTTCGTGCGGCAGTCGGGTGGGCAATTACGGGTGCTGTCGGTGCCTGGc                                                                                                                                                   <  4:9659/149‑1 (MQ=255)      ggCATGTCGGCTGAAGTTGTCGAGCGCGCAGTCGAGCCGTTCTTCACCACCAAGCCGATGGGCCAGGGTACCGGCCTGGGTCTGTCCATGACCTATGGCTTCGTGCGGCAGTCGGGTGGGCAATTACGGGTGCTGTCGGTGCCTGGCGa                                                                                                                                                 <  3:340391/149‑1 (MQ=255)        cccagctcttcgaacacttcgccaatcaccaggcgcaaggccgtctggtcttcaaccaacagaatgcgttttgcagcctcgctgcttctttgcaagagcgtgcgcggaggtttgctgattggcgcctgggcttgctcgtggt                                                                                                                                                      >  1:123287‑M1/142‑142 (MQ=255)        cccagctcttccaacacttcgccaatcaccaggcgcaaggccgtctggtcttcaaccaacagaatgcgttttgcagcctcgctgcttctttgcaagagcgtgcgcggaggtttgctgattggcgcctgggcttgctcgtggt                                                                                                                                                      <  2:123287‑M1/1‑1 (MQ=255)        cATGTCGGCTGAAGTTGTCGAGCGCGCAGTCGAGCCGTTCTTCACCACCAAGCCGATGGGCCAGGGTACCGGCCTGGGTCTGTCCATGACCTATGGCTTCGTGCGGCAGTCGGGTGGGCAATTACGGGTGCTGTCGGTGCCTGGCGAgg                                                                                                                                               <  8:112768/149‑1 (MQ=255)        cATGTCGGCTGAAGTTGTCGAGCGCGCAGTCGAGCCGTTCTTCACCACCAAGCCGATGGGCCAGGGTACCGGCCTGGGTCTGTCCATGACCTATGGCTTCGTGCGGCAGTCGGGTGGGCAATTACGGGTGCTGTCGGTGCCTGGCGAgg                                                                                                                                               <  7:64386/149‑1 (MQ=255)              ggCTGAAGTTGTCGAGCGCGCAGTCGAGCCGTTCTTCACCACCAAGCCGATGGGCCAGGGTACCGGCCTGGGTCTGTCCATGACCTATGGCTTCGTGCGGCAGTCGGGTGGGCAATTACGGGTGCTGTCGGTGCCTGGCGAGGGTAccc                                                                                                                                         >  7:120788/1‑149 (MQ=255)                         tCGAGCGCGCAGTCGAGCCGTTCTTCACCACCAAGCCGATGGGCCAGGGTACCGGCCTGGGTCTGTCCATGACCTATGGCTTCGTGCGGCAGTCGGGTGGGCAATTACGGGTGCTGTCGGTGCCTGGCGAGGGTACCCGCATCGAgct                                                                                                                               <  2:102637/148‑1 (MQ=255)                           gAGCGCGCAGTCGAGCCGTTCTTCACCACCAAGCCGATGGGCCAGGGTACCGGCCTGGGTCTGTCCATGACCTATGGCTTCGTGCGGCAGTCGGGTGGGCAATTACGGGTGCTGTCGGTGCCTGGCGAGGGTACCCGCATCGAgctgct                                                                                                                            <  1:315249/149‑1 (MQ=255)                                   accaggcgcaaggccgtctggtcttcaaccaacagaatgcgttttgcagcctcgctgcttctttgcaagagcgtgcgcggaggtttgctgattggcgcctgggcttgctcgtggTGGCGAGGGTACCCGCATCGAGCTGCTGTTAcccc                                                                                                                    >  1:135114‑M1/115‑149 (MQ=255)                                          ccGTTCTTCACCACCAAGCCGATGGGCCAGGGTACCGGCCTGGGTCTGTCCATGACCTATGGCTTCGTGCGGCAGTCGGGTGGGCAATTACGGGTGCTGTCGGTGCCTGGCGAGGGTACCCGCATCGAGCTGCTGTTACCCCGccacca                                                                                                             >  7:294792/1‑149 (MQ=255)                                             ttgttcACGACCAAGCCGTTGGGCGAGGGTACCGGCGTGGGTCTGTCCATGACCTATGGCTTCGTGCGGCAGTCGGGTGGGCAATTACGGGTGCTGTCGGTGCCTGGCGAGGGTACCCGCATCGAGCTGCTGTTACCCCGcc                                                                                                                 <  4:319427/139‑1 (MQ=255)                                             ttcttcACCACCAAGCCGATGGGCCAGGGTACCGGCCTGGGTCTGTCCATGACCTATGGCTTCGTGCGGCAGTCGGGTGGGCAATTACGGGTGCTGTCGGTGCCTGGCGAGGGTACCCGCATCGAGCTGCTGTTACCCCGcc                                                                                                                 >  3:319427/1‑142 (MQ=255)                                                ttcACCACCAAGCCGATGGGCCAGGGTACCGGCCTGGGTCTGTCAATGACCTATGGCTTCGTGTGGCAGTCGGGTGGGCAATTACGGGTGCTGTCGGTGCCTGGCGAGGGTACCCGCATCGAGCTGCTGTTACCCCGCCACCACGAGc                                                                                                        >  5:219155/1‑148 (MQ=255)                                                 tcACCACCAAGCCGATGGGCCAGGGTACCGGCCTGGGTCTGTCCATGACCTATGGCTTCGTGCGGCAGTCGGGTGGGCAATTACGGGTGCTGTCGGTGCCTGGCGAGGGTACCCGCATCGAGCTGCTGTTAccc                                                                                                                     >  3:56610/1‑134 (MQ=255)                                                 tcACCACCAAGCCGATGGGCCAGGGTACCGGCCTGGGTCTGTCCATGACCTATGGCTTCGTGCGGCAGTCGGGTGGGCAATTACGGGTGCTGTCGGTGCCTGGCGAGGGTACCCGCATCGAGCTGCTGTTAccc                                                                                                                     <  4:56610/134‑1 (MQ=255)                                                  caccacCAAGCCGATGGGCCAGGGTACCGGCCTGGGTCTGTCCATGACCTATGGCTTCGTGCGGCAGTCGGGTGGGCAATTACGGGTGCTGTCGGTGCCTGGCGAGGGTACCCGCATCGAGCTGCTGTTACCCCGCCACCACGAGCAAg                                                                                                     >  3:313244/1‑149 (MQ=255)                                                    ccaccaAGCCGATGGGCCAGGGTACCGGCCTGGGTCTGTCCATGACCTATGGCTTCGTGCGGCAGTCGGGTGGGCAATTACGGGTGCTGTCGGTGCCTGGCGAGGGTACGCGCATCGAGCTGCTGTTACCCCGCCACCACGAGCaa                                                                                                      <  6:11076/146‑1 (MQ=255)                                                    ccaccaAGCCGATGGGCCAGGGTACCGGCCTGGGTCTGTCCATGACCTATGGCTTCGTGCGGCAGTCGGGTGGGCAATTACGGGTGCTGTCGGTGCCTGGCGAGGGTACCCGCATCGAGCTGCTGTTACCCCGCCACCACGAGCaa                                                                                                      >  5:11076/1‑146 (MQ=255)                                                     caccaAGCCGATGGGCCAGGGTACCGGCCTGGGTCTGTCCATGACCTATGGCTTCGTGCGGCAGTCGGGTGGGCAATTACGGGTGCTGTCGGTGCCTGGCGAGGGTACCCGCATCGAGCTGCTGTTACCCCGCCACCCCGAGCAAGccc                                                                                                  >  4:190499/1‑149 (MQ=255)                                                      accaAGCCGATGGGCCAGGGTACCGGCCTGGGTCTGTCCATGACCTATGGCTTCGTGCGGCAGTCGGGTGGGCAATTACGGGTGCTGTCGGTGCCTGGCGAGGGTACCCGCATCGAGCTGCTGTTACCCCGCCACCACGAGCAAGcc                                                                                                   >  4:171141/1‑147 (MQ=255)                                                              gATGGGCCAGGGTACCGGCCTGGGTCTGTCCATGACCTATGGCTTCGTGCGGCAGTCGGGTGGGCAATTACGGGTGCTGTCGGTGCCTGGCGAGGGTACCCGCATCGAGCTGCTGTTACCCCGCCACCACGAGCAAGCCCAGGCGCCaa                                                                                         <  3:171141/149‑1 (MQ=255)                                                                tGGGCCAGGGTACCGGCCTGGGTCTGTCCATGACCTATGGCTTCGTGCGGCAGTCGGGTGGGCAATTACGGGTGCTGTCGGTGCCTGGCGAGGGTACCCGCATCGAGCTGCTGTTACCCCGCCACCACGAGCAAGCCCAGGCGCCaa                                                                                         >  1:173506/1‑147 (MQ=255)                                                                tGGGCCAGGGTACCGGCCTGGGTCTGTCCATGACCTATGGCTTCGTGCGGCAGTCGGGTGGGCAATTACGGGTGCTGTCGGTGCCTGGCGAGGGTACCCGCATCGAGCTGCTGTTACCCCGCCACCACGAGCAAGCCCAGGCGCCaa                                                                                         <  2:173506/147‑1 (MQ=255)                                                                   gCCAGGGTACCGGCCTGGGTCTGTCCATGACCTATGGCTTCGTGTGGCAGTCGGGTGGGCAATTACGGGTGCTGTCGGTGCCTGGCGAGGGTACCCGCATCGAGCTGCTGTTACCCCGCCACCACGAGCAAGCCCAGGCGCCAATCAGc                                                                                    <  6:219155/149‑1 (MQ=255)                                                                          tACCGGCCTGGGGCTGTCCATGACCTATGGCTTCGTGCGGCAGTCGGGTGGGCAATTACGGGTGCTGTCGGTGCCTGGCGAGGGTACCCGCATCGAGCTGCTGTTACCCCGCCACCACGAGCAAGCCCAGGCGCCAATCAGCAAACCTc                                                                             <  4:75307/149‑1 (MQ=255)                                                                           gttttgcagcctcgctgcttctttgcaagagcgtgcgcggaggtttgctgattggcgcctgggcttgctcgtggTGGCGAGGGTACCCGCATCGAGCTGCTGTTACCCCGccacc                                                                                                              <  8:213480‑M1/41‑1 (MQ=255)                                                                           gttttgcagcctcgctgcttctttgcaagagcgtgcgcggaggtttgctgattggcgcctgggcttgctcgtggTGGCGAGGGTACCCGCATCGAGCTGCTGTTACCCCGccacc                                                                                                              >  7:213480‑M1/75‑115 (MQ=255)                                                                             cGGCCTGGGTCTGTCCATGACCTATGGCTTCGTGCGGCAGTCGGGTGGGCAATTACGGGTGCTGTCGGTGCCTGGCGAGGGTACCCGCATCGAGCTGCTGtt                                                                                                                         >  8:297371/1‑102 (MQ=255)                                                                             cGGCCTGGGTCTGTCCATGACCTATGGCTTCGTGCGGCAGTCGGGTGGGCAATTACGGGTGCTGTCGGTGCCTGGCGAGGGTACCCGCATCGAGCTGCTGtt                                                                                                                         <  7:297371/102‑1 (MQ=255)                                                                             cGGCCTGGGTCTGTCCATGACCTATGGCTTCGTGCGGCAGTCGGGTGGGCAATTACGGGTGCTGTCGGTGCCTGGCGAGGGTACCCGCATCGAGCTGCTGTTACCCCGCCACCACGAGCAAGCCCAGGCGCCAATCAGCAAACCTCcgc                                                                          <  4:313244/149‑1 (MQ=255)                                                                                  tGGGTCTGTGCATGACCTATGGCTTCGTTCGGCAGTCGGGTGGGCAATTACGGGTGCTGTCGGTGCCTGGCGAGGTGACCCGCATCGAGCGGCTGGTACCCCGCCACCACGAGCAAGCCCAGGCGCCAATCAGCAAACCTCCGCGCAc                                                                      <  7:226953/148‑1 (MQ=255)                                                                                     gTCTGTCCATGACCTATGGCTTCGTGCGGCAGTCGGGTGGGCAATTACGGGTGCTGTCGGTGCCTGGCGAGGGTACCCGCATCGAGCTGCTGTTACCCCGCCACCACGAGCAAGCCCAGGCGCCAATCAGCAAACCTCCGCGCACGctc                                                                  >  6:18805/1‑149 (MQ=255)                                                                                      tCTGTCCATGACCTATGGCTTCGTGCGGCAGTCGGGTGGGCAATTACGGGTGCTGTCGGTGCCTGGCGa                                                                                                                                                 <  2:77976/69‑1 (MQ=255)                                                                                      tCTGTCCATGACCTATGGCTTCGTGCGGCAGTCGGGTGGGCAATTACGGGTGCTGTCGGTGCCTGGCGa                                                                                                                                                 >  1:77976/1‑69 (MQ=255)                                                                                      tCTGTCCATGACCTATGGCTTCGTGCGGCAGTCGGGTGGGCAATTACGGGTGCTGTCGGTGCCTGGCGAGGGTACCCGCATCGAGCTGCTGTTACCCCGCCACCACGAGCAAGCCCAGGCGCCAATCAGCAAACCTCCGCGCACGctct                                                                 >  4:31750/1‑149 (MQ=255)                                                                                          tCCATGACCTATGGCTTCGTGCGGCAGTCGGGTGGGCAATTACGGGTGCTGTCGGTGCCTGGCGAGGGTACCCGCATCGAGCTGCTGTTACCCCGCCACCACGAGCAAGCCCAGGCGCCAATCAGCAAACCTCCGCGCACGCTCtt                                                                <  8:120788/146‑1 (MQ=255)                                                                                          tCCATGACCTATGGCTTCGTGCGGCAGTCGGGTGGGCAATTACGGGTGCTGTCGGTGCCTGGCGAGGGTACCCGCATCGAGCTGCTGTTACCCCGCCACCACGAGCAAGCCCAGGCGCCAATCAGCAAACCTCCGCGCACGCTCtt                                                                <  7:192502/146‑1 (MQ=255)                                                                                                  cTATGGCTTCGTGCGGCAGTCGGGTGGGCAATTACGGGTGCTGTCGGTGCCTGGCGAGGGTACCCGCATCGAGCTGCTGTTACCCCGCCACCACGAGCAAGCCCAGGCGCCAATCAGCAAACCTCCGCGCACGCTCTTGCAaagaag                                                       >  1:249276/1‑147 (MQ=255)                                                                                                    aTGGCTTCGTGCGGCAGTCGGGTGGGCAATTACGGGTGCTGTCGGTGCCTGGCGAGGGTACCCGCATCGAGCTGCTGTTACCCCGCCACCACGAGCAAGCCCAGGCGCCAATCAGCAAACCTCCGCGCACGCTCTTGCAAAGAagcagc                                                   >  3:197214/1‑149 (MQ=255)                                                                                                    aTGGCTTCGTGCGGCAGTCGGGTGGGCAATTACGGGTGCTGTCGGTGCCTGGCGAGGGTACCCGCATCGAGCTGCTGTTACCCCGCCACCACGAGCAAGCCCAGGCGCCAATCAGCAAACCTCCGCGCACGCTCTTGCAAAGAagcagc                                                   >  3:162702/1‑149 (MQ=255)                                                                                                            gTGCGGCAGTCGGGTTGGCAATTACGGGTGCTGTCGGTGCCTGGCGAGGGTACCCGCATCGAGCTGCTGTTACCCCGCCACCACGAGCAAGCCCAGGCGCCAATCAGCAAACCTCCGCGCACGCTCTTGCAAAGAAGCAGCGAGGCTg                                            <  8:242333/148‑1 (MQ=255)                                                                                                                ggCAGTCGGGTGGGCAATTACGGGTGCTGTCGGTGCCTGGCGAGGGTACCCGCATCGAGCTGCTGTTACCCCGCCACCACGAGCAAGCCCAGGCGCCAATCAGCAAACCTCCGCGCACGCTCTTGCAAAGAAGCAGCGAGGCTGCaaaa                                       >  2:217269/1‑149 (MQ=255)                                                                                                                 gCAGTCGGGTGGGCAATTACGGGTGCTGTCGGTGCCTGGCGAGGGTACCCGCATCGAGCTGCTGTTACCCCGCCACCACGAGCAAGCCCAGGCGCCAATCAGCAAACCTCCGCGCACGCTCTTGCAAAGAAGCAGCGAGGCTGCAAAAc                                      <  4:86882/149‑1 (MQ=255)                                                                                                                   aGTCGGGTGGGCAATTACGGGTGCTGTCGGTGCCTGGCGAGGGTACCCGCATCGAGCTGCTGTTACCCCGCCACCACGAGCAAGCCCAGGCGCCAATCAGCAAACCTCCGCGCACGCTCTTGCAAAGAAGCAGCGAGGCTGCAAAACg                                     >  8:245609/1‑148 (MQ=255)                                                                                                                       gggTGGGCAATTACGGGTGCTGTCGGTGCCTGGCGAGGGTACCCGCATCGAGCTGCTGTTACCCCGCCACCACGAGCAAGCCCAGGCGCCAATCAGCAAACCTCCGCGCACGCTCTTGCAAAGAAGCAGCGAGGCTGCAAAACGCATTc                                >  5:175644/1‑149 (MQ=255)                                                                                                                         gTGGGCAATTACGGGTGCTGTCGGTGCCTGGCGAGGGTACCCGCATCGAGCTGCTGTTACCCCGCCACCACGAGCAAGCCCAGGCGCCAATCAGCAAACCTCCGCGCACGCTCTTGCAAAGAAGCAGCGAGGCTGCAAAACGCATTCTg                              >  1:260466/1‑149 (MQ=255)                                                                                                                         gTGGGCAATTACGGGTGCTGTCGGTGCCTGGCGAGGGTACCCGCATCGAGCTGCTGTTACCCCGCCACCACGAGCAAGCCCAGGCGCCAATCAGCAAACCTCCGCGCACGCTCTTGCAAAGAAGCAGCGAGGCTGCAAAACGCATTCTg                              <  5:18805/149‑1 (MQ=255)                                                                                                                           gggCAATTACGGGTGCTGTCGGTGCCTGGCGAGGGTACCCGCATCGAGCTGCTGTTACCCCGCCACCACGAGCAAGCCCAGGCGCCAATCAGCAAACCTCCGCGCACGCTCTTGCAAAGAAGCAGCGAGGCTGCCAAACGCATTCTgtt                            >  8:127656/1‑149 (MQ=255)                                                                                                                           gggCAATTACGGGTGCTGTCGGTGCCTGGCGAGGGTACCCGCATCGAGCTGCTGTTACCCCGCCACCACGAGCAAGCCCAGGCGCCAATCAGCAAACCTCCGCGCACGCTCTTGCAAAGAAGCAGCGAGGCTGCAAAACGCATTCTgtt                            <  3:31750/149‑1 (MQ=255)                                                                                                                              cAATTACGGGTGCTGTCGGTGCCTGGCGAGGGTACCCGCATCGAGCTGCTGTTACCCCGCCACCACGAGCAAGCCCAGGCGCCAATCAGCAAACCTCCGCGCACGCTCTTGCAAAGAAGCAGCGAGGCTGCAAAACGCATTCTgttggt                         >  2:97298/1‑149 (MQ=255)                                                                                                                               aaTTACGGGTGCTGTCGGTGCCTGGCGAGGGTACCCGCATCGAGCTGCTGTTACCCCGCCACCACGAGCAAGCCCAGGCGCCAATCAGCAAACCTCCGCGCACGCTCTTGCAAAGAAGCAGCGAGGCTGCAAAACGCATTCTgttggtt                        <  6:175644/149‑1 (MQ=255)                                                                                                                                aTTACGGGTGCTGTCGGTGCCTGGCGAGGGTACCCGCATCGAGCTGCTGTTACCCCGCCACCACGAGCAAGCCCAGGCGCCAATCAGCAAACCTCCGCGCACGCTCTTGCAAAGAAGCAGCGAGGCTGCAAAACGCATTCTgttggttg                       <  8:294792/149‑1 (MQ=255)                                                                                                                                   aCGGGTGCTGTCGGTGCCTGGCGAGGGTACCCGCATCGAGCTGCTGTTACCCCGCCACCACGAGCAAGCCCAGGCGCCAATCAGCAAACCTCCGCGCACGCTCTTGCAAAGAAGCAGCGAGGCTGCAAAACGCATTCTGTTGGTTGaa                     <  2:249276/148‑1 (MQ=255)                                                                                                                                      ggTGCTGTCGGTGCCTGGCGAGGGTACCCGCATCGAGCTGCTGTTACCCCGCCACCACGAGCAAGCCCAGGCGCCAATCAGCAAACCTCCGCGCACGCTCTTGCAAAGAAGCAGCGAGGCTGCAAAACGCATTCTGTTGGTTGAAGAcc                 <  7:245609/149‑1 (MQ=255)                                                                                                                                                    cTGGCGAGGGTACCCGCATCGAGCTGCTGTTACCCCGCCACCACGAGCAAGCCCAGGCGCCAATCAGCAAACCTCCGCGCACGCTCTTGCAAAGAAGCAGCGAGGCTGCAAAACGCATTCTGTTGGTTGAAGACCAGACGGCCTTgcgc   >  4:58461/1‑149 (MQ=255)                                                                                                                                                     TGGCGAGTGTTACCGCATCGAGCTGCTGTTACCCCGCCACCACGAGCAAGCCCAGGCGCCAATCAGCAAACCTCCGCGCACGCTCTTGCAAAGAAGCAGCGAGGCTGCAAAACGCATTCTGTTGGTTGAAGACCAGACGGCCTTGCGcc  >  4:197214‑M1/1‑149 (MQ=255)                                                                                                                                                     TGGCGAGGGTACCCGCATCGAGCTGCTGTTACCCCGCCACCACGAGCAAGCCCAGGCGCCAATCAGCAAACCTCCGCGCACGCTCTTGCAAAGAAGCAGCGAGGCTGCAAAACGCATTCTGTTGGTTGAAGACCAGACGGCCTTGCGcc  <  3:112581‑M1/149‑1 (MQ=255)                                                                                                                                                     |                                                                                                                                                     GTAGCGGCATGTCGGCTGAAGTTGTCGAGCGCGCAGTCGAGCCGTTCTTCACCACCAAGCCGATGGGCCAGGGTACCGGCCTGGGTCTGTCCATGACCTATGGCTTCGTGCGGCAGTCGGGTGGGCAATTACGGGTGCTGTCGGTGCCTGGCGAGGGTACCCGCATCGAGCTGCTGTTACCCCGCCACCACGAGCAAGCCCAGGCGCCAATCAGCAAACCTCCGCGCACGCTCTTGCAAAGAAGCAGCGAGGCTGCAAAACGCATTCTGTTGGTTGAAGACCAGACGGCCTTGCGCC  >  NC_002947/4020737‑4021033

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.