New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	4020885 =	49 (0.860)	3 (0.060)	3/250	NT	6.4%	coding (1596/2067 nt)	PP_3546	two‑component system sensor histidine kinase/response regulator
	?	NC_002947	4020924 =	40 (0.730)					coding (1635/2067 nt)	PP_3546	two‑component system sensor histidine kinase/response regulator

CCGTTCTTCACCACCAAGCCGATGGGCCAGGGTACCGGCCTGGGTCTGTCCATGACCTATGGCTTCGTGCGGCAGTCGGGTGGGCAATTACGGGTGCTGTCGGTGCCTGGCGAGGGTACCCGCATCGAGCTGCTGTTACCCCGCCACCACGAGCAAGCCCAGGCGCCAATCAGCAAACCTCCGCGCACGCTCTTGCAAAGAAGCAGCGAGGCTGCAAAACGCATTCTGTTGGTTGAAGACCAGACGGCCTTGCGCCTGGTGATTGGCGAAGTGTTGGAAGAGCTGGGCTATCGGG  >  NC_002947/4020778‑4021072                                                                                                                                                   |                                                                                                                                                     ccGTTCTTCACCACCAAGCCGATGGGCCAGGGTACCGGCCTGGGTCTGTCCATGACCTATGGCTTCGTGCGGCAGTCGGGTGGGCAATTACGGGTGCTGTCGGTGCCTGGCGAGGGTACCCGCATCGAGCTGCTGTTACCCCGccacca                                                                                                                                                    >  7:294792/1‑149 (MQ=255)       ttcACCACCAAGCCGATGGGCCAGGGTACCGGCCTGGGTCTGTCAATGACCTATGGCTTCGTGTGGCAGTCGGGTGGGCAATTACGGGTGCTGTCGGTGCCTGGCGAGGGTACCCGCATCGAGCTGCTGTTACCCCGCCACCACGAGc                                                                                                                                               >  5:219155/1‑148 (MQ=255)         caccacCAAGCCGATGGGCCAGGGTACCGGCCTGGGTCTGTCCATGACCTATGGCTTCGTGCGGCAGTCGGGTGGGCAATTACGGGTGCTGTCGGTGCCTGGCGAGGGTACCCGCATCGAGCTGCTGTTACCCCGCCACCACGAGCAAg                                                                                                                                            >  3:313244/1‑149 (MQ=255)           ccaccaAGCCGATGGGCCAGGGTACCGGCCTGGGTCTGTCCATGACCTATGGCTTCGTGCGGCAGTCGGGTGGGCAATTACGGGTGCTGTCGGTGCCTGGCGAGGGTACGCGCATCGAGCTGCTGTTACCCCGCCACCACGAGCaa                                                                                                                                             <  6:11076/146‑1 (MQ=255)           ccaccaAGCCGATGGGCCAGGGTACCGGCCTGGGTCTGTCCATGACCTATGGCTTCGTGCGGCAGTCGGGTGGGCAATTACGGGTGCTGTCGGTGCCTGGCGAGGGTACCCGCATCGAGCTGCTGTTACCCCGCCACCACGAGCaa                                                                                                                                             >  5:11076/1‑146 (MQ=255)            caccaAGCCGATGGGCCAGGGTACCGGCCTGGGTCTGTCCATGACCTATGGCTTCGTGCGGCAGTCGGGTGGGCAATTACGGGTGCTGTCGGTGCCTGGCGAGGGTACCCGCATCGAGCTGCTGTTACCCCGCCACCCCGAGCAAGccc                                                                                                                                         >  4:190499/1‑149 (MQ=255)             accaAGCCGATGGGCCAGGGTACCGGCCTGGGTCTGTCCATGACCTATGGCTTCGTGCGGCAGTCGGGTGGGCAATTACGGGTGCTGTCGGTGCCTGGCGAGGGTACCCGCATCGAGCTGCTGTTACCCCGCCACCACGAGCAAGcc                                                                                                                                          >  4:171141/1‑147 (MQ=255)                     gATGGGCCAGGGTACCGGCCTGGGTCTGTCCATGACCTATGGCTTCGTGCGGCAGTCGGGTGGGCAATTACGGGTGCTGTCGGTGCCTGGCGAGGGTACCCGCATCGAGCTGCTGTTACCCCGCCACCACGAGCAAGCCCAGGCGCCaa                                                                                                                                <  3:171141/149‑1 (MQ=255)                       tGGGCCAGGGTACCGGCCTGGGTCTGTCCATGACCTATGGCTTCGTGCGGCAGTCGGGTGGGCAATTACGGGTGCTGTCGGTGCCTGGCGAGGGTACCCGCATCGAGCTGCTGTTACCCCGCCACCACGAGCAAGCCCAGGCGCCaa                                                                                                                                >  1:173506/1‑147 (MQ=255)                       tGGGCCAGGGTACCGGCCTGGGTCTGTCCATGACCTATGGCTTCGTGCGGCAGTCGGGTGGGCAATTACGGGTGCTGTCGGTGCCTGGCGAGGGTACCCGCATCGAGCTGCTGTTACCCCGCCACCACGAGCAAGCCCAGGCGCCaa                                                                                                                                <  2:173506/147‑1 (MQ=255)                          gCCAGGGTACCGGCCTGGGTCTGTCCATGACCTATGGCTTCGTGTGGCAGTCGGGTGGGCAATTACGGGTGCTGTCGGTGCCTGGCGAGGGTACCCGCATCGAGCTGCTGTTACCCCGCCACCACGAGCAAGCCCAGGCGCCAATCAGc                                                                                                                           <  6:219155/149‑1 (MQ=255)                                 tACCGGCCTGGGGCTGTCCATGACCTATGGCTTCGTGCGGCAGTCGGGTGGGCAATTACGGGTGCTGTCGGTGCCTGGCGAGGGTACCCGCATCGAGCTGCTGTTACCCCGCCACCACGAGCAAGCCCAGGCGCCAATCAGCAAACCTc                                                                                                                    <  4:75307/149‑1 (MQ=255)                                  gttttgcagcctcgctgcttctttgcaagagcgtgcgcggaggtttgctgattggcgcctgggcttgctcgtggTGGCGAGGGTACCCGCATCGAGCTGCTGTTACCCCGccacc                                                                                                                                                     >  7:213480‑M1/75‑115 (MQ=255)                                  gttttgcagcctcgctgcttctttgcaagagcgtgcgcggaggtttgctgattggcgcctgggcttgctcgtggTGGCGAGGGTACCCGCATCGAGCTGCTGTTACCCCGccacc                                                                                                                                                     <  8:213480‑M1/41‑1 (MQ=255)                                    cGGCCTGGGTCTGTCCATGACCTATGGCTTCGTGCGGCAGTCGGGTGGGCAATTACGGGTGCTGTCGGTGCCTGGCGAGGGTACCCGCATCGAGCTGCTGTTACCCCGCCACCACGAGCAAGCCCAGGCGCCAATCAGCAAACCTCcgc                                                                                                                 <  4:313244/149‑1 (MQ=255)                                         tGGGTCTGTGCATGACCTATGGCTTCGTTCGGCAGTCGGGTGGGCAATTACGGGTGCTGTCGGTGCCTGGCGAGGTGACCCGCATCGAGCGGCTGGTACCCCGCCACCACGAGCAAGCCCAGGCGCCAATCAGCAAACCTCCGCGCAc                                                                                                             <  7:226953/148‑1 (MQ=255)                                            gTCTGTCCATGACCTATGGCTTCGTGCGGCAGTCGGGTGGGCAATTACGGGTGCTGTCGGTGCCTGGCGAGGGTACCCGCATCGAGCTGCTGTTACCCCGCCACCACGAGCAAGCCCAGGCGCCAATCAGCAAACCTCCGCGCACGctc                                                                                                         >  6:18805/1‑149 (MQ=255)                                             tCTGTCCATGACCTATGGCTTCGTGCGGCAGTCGGGTGGGCAATTACGGGTGCTGTCGGTGCCTGGCGAGGGTACCCGCATCGAGCTGCTGTTACCCCGCCACCACGAGCAAGCCCAGGCGCCAATCAGCAAACCTCCGCGCACGctct                                                                                                        >  4:31750/1‑149 (MQ=255)                                                 tCCATGACCTATGGCTTCGTGCGGCAGTCGGGTGGGCAATTACGGGTGCTGTCGGTGCCTGGCGAGGGTACCCGCATCGAGCTGCTGTTACCCCGCCACCACGAGCAAGCCCAGGCGCCAATCAGCAAACCTCCGCGCACGCTCtt                                                                                                       <  7:192502/146‑1 (MQ=255)                                                 tCCATGACCTATGGCTTCGTGCGGCAGTCGGGTGGGCAATTACGGGTGCTGTCGGTGCCTGGCGAGGGTACCCGCATCGAGCTGCTGTTACCCCGCCACCACGAGCAAGCCCAGGCGCCAATCAGCAAACCTCCGCGCACGCTCtt                                                                                                       <  8:120788/146‑1 (MQ=255)                                                         cTATGGCTTCGTGCGGCAGTCGGGTGGGCAATTACGGGTGCTGTCGGTGCCTGGCGAGGGTACCCGCATCGAGCTGCTGTTACCCCGCCACCACGAGCAAGCCCAGGCGCCAATCAGCAAACCTCCGCGCACGCTCTTGCAaagaag                                                                                              >  1:249276/1‑147 (MQ=255)                                                           aTGGCTTCGTGCGGCAGTCGGGTGGGCAATTACGGGTGCTGTCGGTGCCTGGCGAGGGTACCCGCATCGAGCTGCTGTTACCCCGCCACCACGAGCAAGCCCAGGCGCCAATCAGCAAACCTCCGCGCACGCTCTTGCAAAGAagcagc                                                                                          >  3:162702/1‑149 (MQ=255)                                                           aTGGCTTCGTGCGGCAGTCGGGTGGGCAATTACGGGTGCTGTCGGTGCCTGGCGAGGGTACCCGCATCGAGCTGCTGTTACCCCGCCACCACGAGCAAGCCCAGGCGCCAATCAGCAAACCTCCGCGCACGCTCTTGCAAAGAagcagc                                                                                          >  3:197214/1‑149 (MQ=255)                                                                   gTGCGGCAGTCGGGTTGGCAATTACGGGTGCTGTCGGTGCCTGGCGAGGGTACCCGCATCGAGCTGCTGTTACCCCGCCACCACGAGCAAGCCCAGGCGCCAATCAGCAAACCTCCGCGCACGCTCTTGCAAAGAAGCAGCGAGGCTg                                                                                   <  8:242333/148‑1 (MQ=255)                                                                       ggCAGTCGGGTGGGCAATTACGGGTGCTGTCGGTGCCTGGCGAGGGTACCCGCATCGAGCTGCTGTTACCCCGCCACCACGAGCAAGCCCAGGCGCCAATCAGCAAACCTCCGCGCACGCTCTTGCAAAGAAGCAGCGAGGCTGCaaaa                                                                              >  2:217269/1‑149 (MQ=255)                                                                        gCAGTCGGGTGGGCAATTACGGGTGCTGTCGGTGCCTGGCGAGGGTACCCGCATCGAGCTGCTGTTACCCCGCCACCACGAGCAAGCCCAGGCGCCAATCAGCAAACCTCCGCGCACGCTCTTGCAAAGAAGCAGCGAGGCTGCAAAAc                                                                             <  4:86882/149‑1 (MQ=255)                                                                          aGTCGGGTGGGCAATTACGGGTGCTGTCGGTGCCTGGCGAGGGTACCCGCATCGAGCTGCTGTTACCCCGCCACCACGAGCAAGCCCAGGCGCCAATCAGCAAACCTCCGCGCACGCTCTTGCAAAGAAGCAGCGAGGCTGCAAAACg                                                                            >  8:245609/1‑148 (MQ=255)                                                                              gggTGGGCAATTACGGGTGCTGTCGGTGCCTGGCGAGGGTACCCGCATCGAGCTGCTGTTACCCCGCCACCACGAGCAAGCCCAGGCGCCAATCAGCAAACCTCCGCGCACGCTCTTGCAAAGAAGCAGCGAGGCTGCAAAACGCATTc                                                                       >  5:175644/1‑149 (MQ=255)                                                                                gTGGGCAATTACGGGTGCTGTCGGTGCCTGGCGAGGGTACCCGCATCGAGCTGCTGTTACCCCGCCACCACGAGCAAGCCCAGGCGCCAATCAGCAAACCTCCGCGCACGCTCTTGCAAAGAAGCAGCGAGGCTGCAAAACGCATTCTg                                                                     <  5:18805/149‑1 (MQ=255)                                                                                gTGGGCAATTACGGGTGCTGTCGGTGCCTGGCGAGGGTACCCGCATCGAGCTGCTGTTACCCCGCCACCACGAGCAAGCCCAGGCGCCAATCAGCAAACCTCCGCGCACGCTCTTGCAAAGAAGCAGCGAGGCTGCAAAACGCATTCTg                                                                     >  1:260466/1‑149 (MQ=255)                                                                                  gggCAATTACGGGTGCTGTCGGTGCCTGGCGAGGGTACCCGCATCGAGCTGCTGTTACCCCGCCACCACGAGCAAGCCCAGGCGCCAATCAGCAAACCTCCGCGCACGCTCTTGCAAAGAAGCAGCGAGGCTGCCAAACGCATTCTgtt                                                                   >  8:127656/1‑149 (MQ=255)                                                                                  gggCAATTACGGGTGCTGTCGGTGCCTGGCGAGGGTACCCGCATCGAGCTGCTGTTACCCCGCCACCACGAGCAAGCCCAGGCGCCAATCAGCAAACCTCCGCGCACGCTCTTGCAAAGAAGCAGCGAGGCTGCAAAACGCATTCTgtt                                                                   <  3:31750/149‑1 (MQ=255)                                                                                     cAATTACGGGTGCTGTCGGTGCCTGGCGAGGGTACCCGCATCGAGCTGCTGTTACCCCGCCACCACGAGCAAGCCCAGGCGCCAATCAGCAAACCTCCGCGCACGCTCTTGCAAAGAAGCAGCGAGGCTGCAAAACGCATTCTgttggt                                                                >  2:97298/1‑149 (MQ=255)                                                                                      aaTTACGGGTGCTGTCGGTGCCTGGCGAGGGTACCCGCATCGAGCTGCTGTTACCCCGCCACCACGAGCAAGCCCAGGCGCCAATCAGCAAACCTCCGCGCACGCTCTTGCAAAGAAGCAGCGAGGCTGCAAAACGCATTCTgttggtt                                                               <  6:175644/149‑1 (MQ=255)                                                                                       aTTACGGGTGCTGTCGGTGCCTGGCGAGGGTACCCGCATCGAGCTGCTGTTACCCCGCCACCACGAGCAAGCCCAGGCGCCAATCAGCAAACCTCCGCGCACGCTCTTGCAAAGAAGCAGCGAGGCTGCAAAACGCATTCTgttggttg                                                              <  8:294792/149‑1 (MQ=255)                                                                                          aCGGGTGCTGTCGGTGCCTGGCGAGGGTACCCGCATCGAGCTGCTGTTACCCCGCCACCACGAGCAAGCCCAGGCGCCAATCAGCAAACCTCCGCGCACGCTCTTGCAAAGAAGCAGCGAGGCTGCAAAACGCATTCTGTTGGTTGaa                                                            <  2:249276/148‑1 (MQ=255)                                                                                             ggTGCTGTCGGTGCCTGGCGAGGGTACCCGCATCGAGCTGCTGTTACCCCGCCACCACGAGCAAGCCCAGGCGCCAATCAGCAAACCTCCGCGCACGCTCTTGCAAAGAAGCAGCGAGGCTGCAAAACGCATTCTGTTGGTTGAAGAcc                                                        <  7:245609/149‑1 (MQ=255)                                                                                                          ggtggcggggtaacagcagctcgatgcgggtaccctcgccaCCACGAGCAAGCCCAGGCGCCAATCAGCAAACCTCCGCGCACGCTCTTGCAAAGAAGCAGCGAGGCTGCAAAAc                                                                             <  8:213480‑M2/74‑1 (MQ=255)                                                                                                          ggtggcggggtaacagcagctcgatgcgggtaccctcgccaCCACGAGCAAGCCCAGGCGCCAATCAGCAAACCTCCGCGCACGCTCTTGCAAAGAAGCAGCGAGGCTGCAAAAc                                                                             >  7:213480‑M2/42‑115 (MQ=255)                                                                                                           cTGGCGAGGGTACCCGCATCGAGCTGCTGTTACCCCGCCACCACGAGCAAGCCCAGGCGCCAATCAGCAAACCTCCGCGCACGCTCTTGCAAAGAAGCAGCGAGGCTGCAAAACGCATTCTGTTGGTTGAAGACCAGACGGCCTTgcgc                                          >  4:58461/1‑149 (MQ=255)                                                                                                            TGGCGAGTGTTACCGCATCGAGCTGCTGTTACCCCGCCACCACGAGCAAGCCCAGGCGCCAATCAGCAAACCTCCGCGCACGCTCTTGCAAAGAAGCAGCGAGGCTGCAAAACGCATTCTGTTGGTTGAAGACCAGACGGCCTTGCGcc                                         >  4:197214‑M1/1‑149 (MQ=255)                                                                                                            TGGCGAGGGTACCCGCATCGAGCTGCTGTTACCCCGCCACCACGAGCAAGCCCAGGCGCCAATCAGCAAACCTCCGCGCACGCTCTTGCAAAGAAGCAGCGAGGCTGCAAAACGCATTCTGTTGGTTGAAGACCAGACGGCCTTGCGcc                                         <  3:112581‑M1/149‑1 (MQ=255)                                                                                                                ggggtaacagcagctcgatgcgggtaccctcgccaCCACGAGCAAGCCCAGGCGCCAATCAGCAAACCTCCGCGCACGCTCTTGCAAAGAAGCAGCGAGGCTGCAAAACGCATTCTGTTGGTTGAAGACCAGACGGCCTTGCGCCTGGt                                     >  1:135114‑M2/36‑149 (MQ=255)                                                                                                                     tACCCGCATCGAGCTGCTGTTACCCCGCCACCACGAGCAAGCCCAGGCGCCAATCAGCAAACCTCCGCGCACGCTCTTGCAAAGAAGCAGCGAGGCTGCAAAACGCATTCTGTTGGTTGAAGACCAGACGGCCTTGCGCCTGGTGATTg                                >  7:167091/1‑149 (MQ=255)                                                                                                                        ccGCATCGAGCTGCTGTTACCCCGCCACCACGAGCAAGCCCAGGCGCCAATCAGCAAACCTCCGCGCACGCTCTTGCAAAGAAGCAGCGAGGCTGCa                                                                                 <  6:268562/97‑1 (MQ=255)                                                                                                                        ccGCATCGAGCTGCTGTTACCCCGCCACCACGAGCAAGCCCAGGCGCCAATCAGCAAACCTCCGCGCACGCTCTTGCAAAGAAGCAGCGAGGCTGCa                                                                                 >  5:268562/1‑97 (MQ=255)                                                                                                                          gCATCGAGCTGCTGTTACCCCGCCACCACGAGCAAGCCCAGGCGCCAATCAGCAAACCTCCGCGCACGCTCTTGCAAAGAAGCAGCGAGGCTGAAAAACGCATTCTGTTGGTTTAAGACCAGACGGCCTTGCGCCTGGTGATTGGCGaa                           <  2:260466/149‑1 (MQ=255)                                                                                                                                       gTTACCCCGCCACCACGAGCAAGCCCAGGCGCCAATCAGCAAACCTCCGCGCACGCTCTTGCAAAGAAGCAGCGAGGCTGCAAAACGCATTCTGTTGGTTGAAGACCAGACGGCCTTGCGCCTGGTGATTGGCGAAGTGTTGGAAGAGc              >  6:188422/1‑149 (MQ=255)                                                                                                                                          aCCCCGCCACCACGAGCAAGCCCAGGCGCCAATCAGCAAACCTCCGCGCACGCTCTTGCAAAGAAGCAGCGAGGCTGCAAAACGCATTCTGTTGGTTGAAGACCAGACGGCCTTGCGCCTGGTGATTGGCGAAGTGTTGGAAGAGCTgg           >  3:187380/1‑149 (MQ=255)                                                                                                                                          aCCCCGCCACCACGAGCAAGCCCAGGCGCCAATCAGCAAACCTCCGCGCACGCTCTTGCAAAGAAGCAGCGAGGCTGCAAAACGCATTCTGTTGGTTGAAGACCAGACGGCCTTGCGCCTGGTGATTGGCGAAGTGTTGGAAGAGCTg            <  3:190499/148‑1 (MQ=255)                                                                                                                                          aCCCCGCCACCACGAGCAAGCCCAGGCGCCAATCAGCAAACCTCCGCGCACGCTCTTGCAAAGAAGCAGCGAGGCTGCAAAACGCATTCTGTTGGTTGAAGACCAGACGGCCTTGCGCCTGGTGATTGGCGAAGTGTTGGAAGAGCTg            <  1:217269/148‑1 (MQ=255)                                                                                                                                           ccccGCCACCACGAGCAAGCCCAGGCGCCAATCAGCAAACCTCCGCGCACGCTCTTGCAAAGAAGCAGCGAGGCTGCAAAACGCATTCTGTTGGTTGAAGACCAGACGGCCTTGCGCCTGGTGATTGGCGAAGTGTTGGAAGAGCTggg          >  1:161961/1‑149 (MQ=255)                                                                                                                                            cccGCCACCACGAGCAAGCCCAGGCGCCAATCAGCAAACCTCCGCGCACGCTCTTGCAAAGAAGCAGCGAGGCTGCAAAACGCATTCTGTTGGTTGAAGACCAGACGGCCTTGCGCCTGGTGAtt                                 <  2:123536/125‑1 (MQ=255)                                                                                                                                            cccGCCACCACGAGCAAGCCCAGGCGCCAATCAGCAAACCTCCGCGCACGCTCTTGCAAAGAAGCAGCGAGGCTGCAAAACGCATTCTGTTGGTTGAAGACCAGACGGCCTTGCGCCTGGTGATTGGCGAAGTGTTGGAAGAGCTGGGc         >  6:279224/1‑149 (MQ=255)                                                                                                                                            cccGCCACCACGAGCAAGCCCAGGCGCCAATCAGCAAACCTCCGCGCACGCTCTTGCAAAGAAGCAGCGAGGCTGCAAAACGCATTCTGTTGGTTGAAGACCAGACGGCCTTGCGCCTGGTGATTGGCGAAGTGTTGGAAGAGCTGGGc         >  5:147431/1‑149 (MQ=255)                                                                                                                                                ccaCCACGAGCAAGCCCAGGCGCCAATCAGCAAACCTCCGCGCACGCTCTTGCAAAGAAGCAGCGAGGCTGCAAAACGCATTCTGTTGGTTGAAGACCAGACGGCCTTGCGCCTGGTGATTGGCGAAGTGTTGGAAGAGCTGGGCTATc     <  4:162702‑M2/146‑1 (MQ=255)                                                                                                                                                ccaCCACGAGCAAGCCCAGGCGCCAATCAGCAAACCTCCGCGCACGCTCTTGCAAAGAAGCAGCGAGGCTGCAAAACGCATTCTGTTGGTTGAAGACCAGACGGCCTTGCGCCTGGTGATTGGCGAAGTGTTGGAAGAGCTGGGCTATc     <  1:97298‑M2/146‑1 (MQ=255)                                                                                                                                                 caCCACGAGCAAGCCCAGGCGCCAATCAGCAAACCTCCGCGCACGCTCTTGCAAAGAAGCAGCGAGGCTGCAAAACGCATTCTGTTGGTTGAAGACCAGACGGCCTTGCGCCTGGTGATTGGCGAAGTGTTGGAAGAGCTGGGCTATCg    >  7:138934‑M2/3‑149 (MQ=255)                                                                                                                                                  aCCACGAGCAAGCCCAGGCGCCAATCAGCAAACCTCCGCGCACGCTCTTGCAAAGAAGCAGCGAGGCTGCAAAACGCATTCTGTTGGTTGAAGACCAGACGGCCTTGCGCCTGGTGATTGGCGAAGTGTTGGAAGAGCTggg          <  2:123287‑M2/141‑1 (MQ=255)                                                                                                                                                  aCCACGAGCAAGCCCAGGCGCCAATCAGCAAACCTCCGCGCACGCTCTTGCAAAGAAGCAGCGAGGCTGCAAAACGCATTCTGTTGGTTGAAGACCAGACGGCCTTGCGCCTGGTGATTGGCGAAGTGTTGGAAGAGCTGGGCTATCgg   <  5:188422‑M2/148‑1 (MQ=255)                                                                                                                                                  aCCACGAGCAAGCCCAGGCGCCAATCAGCAAACCTCCGCGCACGCTCTTGCAAAGAAGCAGCGAGGCTGCAAAACGCATTCTGTTGGTTGAAGACCAGACGGCCTTGCGCCTGGTGATTGGCGAAGTGTTCGAAGAGCTggg          >  1:123287‑M2/2‑142 (MQ=255)                                                                                                                                                   ccacGAGCAAGCCCAGGCGCCAATCAGCAAACCTCCGCGCACGCTCTTGCAAAGAAGCAGCGAGGCTGCAAAACGCATTCTGTTGGTTGAAGACCAGACGGCCTTGCGCCTGGTGATTGGCGAAGTGTTGGAAGAGCTGGGCTATCggg  >  1:284282/1‑149 (MQ=255)                                                                                                                                                   |                                                                                                                                                     CCGTTCTTCACCACCAAGCCGATGGGCCAGGGTACCGGCCTGGGTCTGTCCATGACCTATGGCTTCGTGCGGCAGTCGGGTGGGCAATTACGGGTGCTGTCGGTGCCTGGCGAGGGTACCCGCATCGAGCTGCTGTTACCCCGCCACCACGAGCAAGCCCAGGCGCCAATCAGCAAACCTCCGCGCACGCTCTTGCAAAGAAGCAGCGAGGCTGCAAAACGCATTCTGTTGGTTGAAGACCAGACGGCCTTGCGCCTGGTGATTGGCGAAGTGTTGGAAGAGCTGGGCTATCGGG  >  NC_002947/4020778‑4021072

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.