New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	4146453 =	64 (1.130)	3 (0.060)	3/244	NT	5.3%	coding (536/2184 nt)	PP_3651	two‑component system sensor histidine kinase/response regulator
	?	NC_002947	4146516 =	47 (0.880)					coding (599/2184 nt)	PP_3651	two‑component system sensor histidine kinase/response regulator

CGATTCGCGGCCATGATGGCGAGATTCTGGGCATGCTCGACACGGTCACCGAAACCACCGCCAGCGTGGTCACCAACCAGCGCCTGAACTTTCTCGATACCCTCGGGCGAGCCG‑TGACCGAGGCGACCGACCCGGA‑CCAGATCATGGCCATCACCACCCGCATGCTGGTCGAGCACCTTGGCCTGTCCAGCTGCGCCTATGCGGTGATGGACCCCGACGAGGACGGTTTCACCATTTGCGGCGATGCAGTGACCCCCGGTTCACCACGCCTGGTGGGCCACTATCACCTGCAT  >  NC_002947/4146306‑4146598                                                                                                                                                      |                                                                                                                                                  cGATTCGCGGCCATGATGGCGAGATTCTGGGCATGCTCGACACGGTCACCGAAACCACCGCCAGCGTGGTCACCAACCAGCGCCTCAACTTTCTCGATACCCGCGGGCGAGCCG‑TGACCGAGGCGACCGACCCCGA‑CCAGCTCATGGcc                                                                                                                                                  >  5:309624/1‑149 (MQ=255)    ttCGCGGCCATGATGGCGAGATTCTGGGCATGCTCGACACGGTCACCGAAACCACCGCCAGCGTGGTCACCAACCAGCGCCTGAACTTTCTCGATACCCTCGGGCGAGCCG‑TGACCGAGGCGACCGACCCGGA‑CCAGATCATGGCCATc                                                                                                                                               <  6:196248/149‑1 (MQ=255)          attgatcaccagggccaggcggctgcgcaggcggctgagagccaggcggccgaagtcatgcaggtgatagtggccgaccaggcgtggtgaaccgggggtcactgcatcgccgcaaatggtgaaaccgtcctcgtcggggtCCATcacc                                                                                                                                            >  4:342056‑M1/141‑148 (MQ=255)             atgatgGCGAGATTCTGGGCATGCTCGACACGGTCACCGAAACCACCGCCAGCGTGGTCACCAACCAGAGCCAGAACTTTCTCGATACCCTCTCGCGAGCCG‑TGACCCAGCCGACCGCCCCGTA‑CCACATCATGGCCATCAAAACCCg                                                                                                                                       >  5:179601/1‑148 (MQ=255)              tgatgGCGAGATTCTGGGCATGCTCGACACGGTCACCGAAACCACCGCCAGCGTGGTCACCAACCAGCGCCTGAACTTTCTCGATACCCTCGGGCGAGCCG‑TGACCGAGGCGACCGACCCGGA‑CCAGATCATGGCCATCACCACCCGCa                                                                                                                                     >  6:28491/1‑149 (MQ=255)                  ggCGAGATTCTGGGCATGCTCGACACGGTCACCGAAACCACCGCCAGCGTGGTCACCAACCAGCGCCTGAACTTTCTCGATACCCTCGGGCGAGCCG‑TGACCGAGGCGACCGACCCGGA‑CCAGATCATGGCCATCACCACCCGCATGCt                                                                                                                                 >  8:59861/1‑149 (MQ=255)                  ggCGAGATTCTGGGCATGCTCGACACGGTCACCGAAACCACCGCCAGCGTGGTCACCAACCAGCGCCTGAACTTTCTCGATACCCTCGGGCGAGCCG‑TGACCGAGGCGACCGACCCGGA‑CCAGATCATGGCCATCACCACCCGCATGCt                                                                                                                                 >  3:319455/1‑149 (MQ=255)                    cGAGATTCTGGGCATGCTCGACACGGTCACCGAAACCACCGCCAGCGTGGTCACCAACCAGCGCCTGAACTTTCTCGATACCCTCGGGCGAGCCG‑TGACCGAGGCGACCGACCCGGA‑CCAGATCATGGCCATCACCACCCGCATGCTgg                                                                                                                               >  7:147978/1‑149 (MQ=255)                          tCTGGGCATGCTCGACACGGTCACCGAAACCACCGCCAGCGTGGTCACCAACCAGCGCCTGAACTTTCTCGATACCCTCGGGCGAGCCG‑TGACCGAGGCGACCGACCCGGA‑CCAGATCATGGCCATCACCACCCGCATGCTGGTCGAg                                                                                                                          <  4:161295/148‑1 (MQ=255)                          tCTGGGCATGCTCGACACGGTCACCGAAACCACCGCCAGCGTGGTCACCAACCAGCGCCTGAACTTTCTCGATACCCTCGGGCGAGCCG‑TGACCGAGGCGACCGACCCGGA‑CCAGATCATGGCCATCACCACCCGCATGCTGGTCGAg                                                                                                                          <  4:155809/148‑1 (MQ=255)                              ggCATGCTCGACACGGTCACCGAAACCACCGCCAGCGTGGTCACCAACCAGCGCCTGAACTTTCTCGATACCCTCGGGCGAGCCG‑TGACCGAGGCGACCGACCCGGA‑CCAGATCATGGCCATCACCACCCGCATGCTGGTCGAGCa                                                                                                                        <  6:367904/146‑1 (MQ=255)                              ggCATGCTCGACACGGTCACCGAAACCACCGCCAGCGTGGTCACCAACCAGCGCCTGAACTTTCTCGATACCCTCGGGCGAGCCG‑TGACCGAGGCGACCGACCCGGA‑CCAGATCATGGCCATCACCACCCGCATGCTGGTCGAGCACCt                                                                                                                     >  3:316270/1‑149 (MQ=255)                              ggCATGCTCGACACGGTCACCGAAACCACCGCCAGCGTGGTCACCAACCAGCACCTGAACTTTCTCGATACCCTCGGGCGAGCCG‑TGACCGAGGCGACCGACCCGGA‑CCAGATCATGGCCATCACCACCCGCATGCTGGTCGAGCAc                                                                                                                       <  3:107092/147‑1 (MQ=255)                                cATGCTCGACACGGTCACCGAAACCACCGCCAGCGTGGTCACCAACCAGCGCCTGAACTTTCTCGATACCCTCGGGCGAGCCG‑TGACCGAGGCGACCGACCCGGA‑CCAGATCATGGCCATCACCACCCGCATGCTGGTCGAGCACCTTg                                                                                                                   <  4:316270/149‑1 (MQ=255)                                 aTGCTCGACACGGTCACCGAAACCACCGCCAGCGTGGTCACCAACCAGCGCCTGAACTTTCTCGATACCCTCGGGCGAGCCGTTGACCGAGGCGACCGACCCGGA‑CCAGATCATGGCCATCACCACCCGCATGCTGGTCGAGCACCTTg                                                                                                                   <  1:107044/149‑1 (MQ=255)                                       gACACGGTCACCGAAACCACCGCCAGCGTGGTCACCAACCAGCGCCTGAACTTTCTCGATACCCTCGGGCGAGCCG‑TGACCGAGGCGACCGACCCGGACCCAGATCATGGCCATCACCACCCGCATGCTGGTCGAGCACCTTGGc                                                                                                                 <  1:74655/145‑1 (MQ=255)                                       gACACGGTCACCGAAACCACCGCCAGCGTGGTCACCAACCAGCGCCTGAACTTTCTCGATACCCTCGGGCGAGCCG‑TGACCGAGGCGACCGACCCGGA‑CCAGATCATGGCCATCACCACCCGCATGCTGGTCGAGCACCTTGGc                                                                                                                 >  2:74655/1‑144 (MQ=255)                                            ggTCACCGAAACCACCGCCAGCGTGGTCACCAACCAGCGCCTGAACTTTCTCGATACCCTCGGGCGAGCCG‑TGACCGAGGCGACCGACCCGGA‑CCAGATCATGGCCATCACCACCCGCATGCTGGTCGAGCACCTTGGCCTGTCCAGCt                                                                                                       >  6:191363/1‑149 (MQ=255)                                              tCACCGAAACCACCGCCAGCGTGGTCACCAACCAGCGCCTGAACTTTCTCGATACCCTCGGGCGAGCCG‑TGACCGAGGCGACCGACCCGGA‑CCAGATCATGGCCATCACCACCCGCATGCTGGTCGAGCACCTTGGCCTGTCCAGCTgc                                                                                                     <  1:61218/149‑1 (MQ=255)                                                aCCGAAACCACCGCCAGCGTGGTCACCAACCAGCGCCTGAACTTTCTCGATACCCTCGGGCGAGCCG‑TGACCGAGGCGACCGACCCGGA‑CCAGATCATGGCCATCACCACCCGCATGCTGGTCGAGCACCTTGGCCTGTCCAGCTgcgc                                                                                                   >  1:361278/1‑149 (MQ=255)                                                    aaaCCACCGCCAGCGTGGTCACCAACCAGCGCCTGAACTTTCTCGATACCCTCGGGCGAGCCG‑TGACCGAGGCGACCGACCCGGA‑CCAGATCATGGCCATCACCACCCGCATGCTGGTCGAGCACCTTGGCCTGTCCAGCTGCGCCTAt                                                                                               >  3:124528/1‑149 (MQ=255)                                                    aaaCCACCGCCAGCGTGGTCACCAACCAGCGCCTGAACTTTCTCGATACCCTCGGGCGAGCCG‑TGACCGAGGCGACCGACCCGGA‑CCAGATCATGGCCATCACCACCCGCATGCTGGTCGAGCACCTTGGCCTGTCCAGCTGCGCCTAt                                                                                               <  7:59861/149‑1 (MQ=255)                                                      accaccGCCAGCGTGGTCACCAACCAGCGCCTGAACTTTCTCGATACCCTCGGGCGAGCCG‑TGACCGAGGCGACCGACCCGGA‑CCAGATCATGGCCATCACCACCCGCATGCTGGTCGAGCACCTTGGCCTGTCCAGCTGCGCCTATGc                                                                                             <  5:191363/149‑1 (MQ=255)                                                      accaccGCCAGCGTGGTCACCAACCAGCGCCTGAACTTTCTCGATACCCTCGGGCGAGCCG‑TGACCGAGGCGACCGACCCGGA‑CCAGATCATGGCCATCACCACCCGCATGCTGGTCGAGCACCTTGGCCTGTCCAGCTGCGCCTATGc                                                                                             <  4:319455/149‑1 (MQ=255)                                                        caccGCCAGCGTGGTCACCAACCAGCGCCTGAACTTTCTCGATACCCTCGGGCGAGCCG‑TGACCGAGGCGACCGACCCGGA‑CCAGATCATGGCCATCACCACCCGCATGCTgg                                                                                                                               <  3:175915/113‑1 (MQ=255)                                                        caccGCCAGCGTGGTCACCAACCAGCGCCTGAACTTTCTCGATACCCTCGGGCGAGCCG‑TGACCGAGGCGACCGACCCGGA‑CCAGATCATGGCCATCACCACCCGCATGCTgg                                                                                                                               >  4:175915/1‑113 (MQ=255)                                                        caccGCCAGCGTGGTCACCAACCAGCGCCTGAACTTTCTCGATACCCTCGGGCGAGCCG‑TGACCGAGGCGACCGACCCGGA‑CCAGATCATGGCCATCACCACCCGCATGCTGGTCGAGCACCTTGGCCTGTCCAGCTGCGCCTATGCgg                                                                                           <  8:147978/149‑1 (MQ=255)                                                        caacGCCATCGTGGTCACCAACCAGCGCCTGAACTTTCTCGATACCCTCGGGCGAGCCG‑TGACCGAGGCGACCGACCCGGA‑CCAGATCATGGCCATCACCACCCGCATGCTGGTCGAGCACCTTGGCCTGTCCAGCTGCGCCTATGCgg                                                                                           <  6:179601/146‑1 (MQ=255)                                                         accGCCAGCGTGGTCACCAACCAGCGCCTGAACTTTCTCGATACCCTCGGGCGAGCCG‑TGACCGAGGCGACCGACCCGGA‑CCAGATCATGGCCATCACCACCCGCATGCTGGTCGAGCACCTTGGCCTGTCCAGCTGCGCCTATGCGGt                                                                                          >  4:122537/1‑149 (MQ=255)                                                            cgaagtcatgcaggtgatagtggcccaccaggcgtggtgaaccgggggtcactgcatcgccgcaaatggtgaaaccgtcctcgtcggggtCCATCACCACCCGCATGCTGGTCGAGCACCTTGGCCTGTCCAGCTGCGCCTATGCGGt                                                                                          <  2:11059‑M1/58‑1 (MQ=255)                                                             ccAGCGTGGTCACCAACCAGCTCCTGAACTTTCTCGATACCCTCGTGCGAGCCG‑TGACCGAGGCGACCGACCCGGA‑CCAGATCATGGCCATCACCACCCGCATGCTGGTCGAGCACCTTGGCCTGTCCAGCTGCGCCTATGCGGTGATg                                                                                      <  4:279413/149‑1 (MQ=255)                                                               agtcatgcaggtgatagtggcccaccaggcgtggtgaaccgggggtcactgcatcgccgcaaatggtgaaaccgtcctcgtcggggtCCATCACCACCCGCATGCTGGTCGAGCACCTTGGCCTGTCCAGCTGCGCCTATGCGGTGATg                                                                                      >  1:11059‑M1/88‑149 (MQ=255)                                                               aGCGTGGTCACCAACCAGCGCCTGAACTTTCTCGATACCCTCGGGCGAGCCG‑TGACCGAGGCGACCGACCCGGA‑CCAGATCATGGCCATCACCACCCGCATGCTGGTCGAGCACCTTGGCCTGTCCAGCTGCGCCTATGCGGTGATGGa                                                                                    >  7:335811/1‑149 (MQ=255)                                                                  gTGGTCACCAACCAGCGCCTGAACTTTCTCGATCCCCTCGGGCGAGCCG‑TGACCGAGGCGACCGACCCGGA‑CCAGATCATGGCCATCACCACCCGCATGCTGGTCGAGCACCTTGGCCTGTCCAGCTGCGCCTATGCGGTGATGGAccc                                                                                 <  6:303771/149‑1 (MQ=255)                                                                  catgcaggtgatagtggcccaccaggcgtggtgaaccgggggtcactgcatcgccgcaaatggtgaaaccgtcctcgtcggggtCCATCACCACCCGCATGCTGGTCGAGCACCTTGGCCTGTCCAGCTGCGCCTATGCGGTGATGGa                                                                                    >  8:223646‑M1/85‑148 (MQ=255)                                                                        accaaccaGCGCCTGAACTTTCTCGATACCCTCGGGCGAGCCG‑TGACCGAGGCGACCGACCCGGA‑CCAGATCATGGCCATCACCACCCGCATGCTGGTCGAGCACCTTGGCCTGTCCAGCTGCGCCTATGCGGTGATGGACCCcgacga                                                                           <  4:124528/149‑1 (MQ=255)                                                                          caaccaGCGCCTGAACTTTCTCGATACCCTCGGGCGAGCCG‑TGACCGAGGCGACCGACCCGGA‑CCAGATCATGGCCATCACCACCCGCATGCTGGTCGAGCACCTTGGCCTGTCCAGCTGCGCCTATGCg                                                                                            <  6:17864/130‑1 (MQ=255)                                                                          caaccaGCGCCTGAACTTTCTCGATACCCTCGGGCGAGCCG‑TGACCGAGGCGACCGACCCGGA‑CCAGATCATGGCCATCACCACCCGCATGCTGGTCGAGCACCTTGGCCTGTCCAGCTGCGCCTATGCg                                                                                            >  5:17864/1‑130 (MQ=255)                                                                          caaccaGCGCCTGAACTTTCTCGATACCCTCGGGCGAGCCG‑TGACCGAGGCGACCGACCCGGA‑CCAGATCATGGCCATCACCACCCGCATGCTGGTCGAGCACCTTGGCCTGTCCAGCTGCGCCTATGCGGTGATGGACCCCGACGAgg                                                                         <  2:361278/149‑1 (MQ=255)                                                                                    cTGAACTTTCTCGATACCCTCGGGCGAGCCG‑TGACCGAGGCGACCGACCCGGA‑CCAGATCATGGCCATCACCACCCGCATGCTGGTCGAGCACCTTGGCCTGTCCAGCTGCGCCTATGCGGTGATGGACCCCGACGAGGACGGTTTCAc                                                               >  7:292208/1‑149 (MQ=255)                                                                                     tGAACTTTCTCGATACCCTCGGGCGAGCCG‑TGACCGAGGCGACCGACCCGGA‑CCAGATCATGGCCATCACCACCCGCATGCTGGTCGAGCACCTTGGCCTGTCCAGCTGCGCCTATGCGGTGATGGACCCCGACGAGGACGGTTTCAc                                                               >  1:238056/1‑148 (MQ=255)                                                                                      gAACTTTCTCGATACCCTCGGGCGAGCCG‑TGACCGAGGCGACCGACCCGGA‑CCAGATCATGGCCATCACCACCCGCATGCTGGTCGAGCACCTTGGCCt                                                                                                               >  3:171143/1‑99 (MQ=255)                                                                                      gAACTTTCTCGATACCCTCGGGCGAGCCG‑TGACCGAGGCGACCGACCCGGA‑CCAGATCATGGCCATCACCACCCGCATGCTGGTCGAGCACCTTGGCCt                                                                                                               <  4:171143/99‑1 (MQ=255)                                                                                        aCTTTCTCGATACCCTCGGGCGAGCCG‑TGACCGAGGCGACCGACCCGGA‑CCAGATCATGGCCATCACCACCCGCATGCTGGTCGAGCACCTTGGCCTGTCCAGCTGCGCCTATGCGGTGATGGACCCCGACGAGGACGGTTTCACCAtt                                                           <  5:360222/149‑1 (MQ=255)                                                                                          tttCTCGATACCCTCGGGCGAGCCG‑TGACCGAGGCGACCGACCCGGA‑CCAGATCATGGCCATCACCACCCGCATGCTGGTCGAGCACCTTGGCCTCTCCAGCTCCGCCTATGCGGTTATGGACCCCGACGAGCACGGTTTAACCATTTg                                                         >  8:275845/1‑149 (MQ=255)                                                                                            tctcGATACCCTCGGGCGAGCCG‑TGACCGAGGCGACCGACCCGGA‑CCAGATCATGGCCATCACCACCCGCATGCTGGTCGAGCACCTTGGCCTGTCCAGCTGCGCCTATGCGGTGATGGACCCCGACGAGGACGGTTTCACCATTTg                                                         <  7:275845/147‑1 (MQ=255)                                                                                            tctcGATACCCTCGGGCGAGCCG‑TGACCGAGGCGACCGACCCGGA‑CCAGATCATGGCCATCACCACCCGCATGCTGGTCGAGCACCTTGGCCTGTCCAGCTGCGCCTAAGCGGTGATGGACCCCGACGAGGACGGTTTCACCATTTgcg                                                       >  5:294094/1‑149 (MQ=255)                                                                                                gATACCCTCGGGCGAGCCG‑TGACCGAGGCGACCGACCCGGA‑CCAGATCATGGCCATCACCACCCGCATGCTGGTCGAGCACCTTGGCCTGTCCAGCTGCGCCTATGCGGTGATGGACCCCGACGAGGACGGTTTCACCATTTgcggc                                                     <  2:40334/147‑1 (MQ=255)                                                                                                gATACCCTCGGGCGAGCCG‑TGACCGAGGCGACCGACCCGGA‑CCAGATCATGGCCATCACCACCCGCATGCTGGTCGAGCACCTTGGCCTGTCCAGCTGCGCCTATGCGGTGATGGACCCCGACGAGGACGGTTTCACCATTTGCGGCGa                                                   <  5:181113/149‑1 (MQ=255)                                                                                                 aTACCCTCGGGCGAGCCG‑TGACCGAGGCGACCGACCCGGA‑CCAGATCATGGCCATCACCACCCGCATGCTGGTCGAGCACCTTGGCCTGTCCAGCTGCGCCTATGCGGTGATGGACCCCGACGAGGACGGTTTCACCATTTGCGGCGAt                                                  >  5:87469/1‑149 (MQ=255)                                                                                                  tACCCTCGGGCGAGCCG‑TGACCGAGGCGACCGACCCGGA‑CCAGATCATGGCCATCACCACCCGCATGCTGGTCGAGCACCTTGGCCTGTCCAGCTGCGCCTATGCGGTGATGGACCCCGACGAGGACGGTTTCACCATTTGCGGCGATg                                                 <  4:55145/149‑1 (MQ=255)                                                                                                    cccTCGGGCGAGCCG‑TGACCGAGGCGACCGACCCGGA‑CCAGATCATGGCCATCACCACCCGCATGCTGGTCGAGCACCTTGGCCTGTCCAGCTGCGCCTATGCGGTGATGGACCCCGACGAGGACGGTTTCACCATTTGCGGCGATGCa                                               <  8:292208/149‑1 (MQ=255)                                                                                                     ccTCGGGCGAGCCG‑TGACCGAGGCGACCGACCCGGA‑CCAGATCATGGCCATCACCACCCGCATGCTGGTCGAGCACCTTGGCCTGTCCAGCTGCGCCTATGAGGTGATGGACCCCGACGAGGACGGTTTCACCATTTGCGGCGATGCAg                                              >  3:67482/1‑149 (MQ=255)                                                                                                         gggCGAGCCG‑TGACCGAGGCGACCGACCCGGA‑CCAGATCATGGCCATCACCACCCGCATGCTGGTCGAGCACCTTGGCCTGTCCAGCTGCGCCTATGCGGTGATGGACCCCGACGAGGACGGTTTCACCATTTGCGGCGATGCAGTGAc                                          <  4:67482/149‑1 (MQ=255)                                                                                                             gAGCCG‑TGACCGAGGCGACCGACCCGGA‑CCAGATCATGGCCATCACCACCCGCATGCTGGTCGAGCACCTTGGCCTGTCCAGCTGCGCCTATGCGGTGATGGACCCCGACGAGGACGGTTTCACCATTTGCGGCGATGCAGTGAccccc                                      >  8:172623/1‑149 (MQ=255)                                                                                                               gCCG‑TGACCGAGGCGACCGACCCGGA‑CCAGATCATGGCCATCACCACCCGCATGCTGGTCGAGCACCTTGGCCTGTCCAGCTGCGCCTATGCGGTGATGGACCCCGACGAGGACGGTTTCACCATTTGCGGCGATGCAGTGACCCCCgg                                    >  8:79665/1‑149 (MQ=255)                                                                                                                       ccGAGGCGACCGACCCGGA‑CCAGATCATGGCCATCACCACCCGCATGCTGGTCGAGCACCTTGGCCTGTCCAGCTGCGCCTATGCGGTGATGGACCCCGACGAGGACGGTTTCACCATTTGCGGCGATGCAGTGACCCCCGGTTcacca                             >  6:158055/1‑149 (MQ=255)                                                                                                                       ccGAGGCGACCGACCCGGA‑CCAGATCATGGCCATCACCACCCGCATGCTGGTCGAGCACCTTGGCCTGTCCAGCTGCGCCTATGCGGTGATGGACCCCGACGAGGACGGTTTCACCATTTGCGGCGATGCAGTGACCCCCGGTTcacca                             >  4:20481/1‑149 (MQ=255)                                                                                                                        cGAGGCGACCGACCCGGA‑CCAGATCATGGCCATCACCACCCGCATGCTGGTCGAGCACCTTGGCCTGTCCAGCTGCGCCTATGCGGTGATGGACCCCGACGAGGACGGTTTCACCATTTGCGGCGATGCAGTGACCCCCGGTTca                                <  4:33842/145‑1 (MQ=255)                                                                                                                        cGAGGCGACCGACCCGGA‑CCAGATCATGGCCATCACCACCCGCATGCTGGTCGAGCACCTTGGCCTGTCCAGCTGCGCCTATGCGGTGATGGACCCCGACGAGGACGGTTTCACCATTTGCGGCGATGCAGTGACCCCCGGTTca                                >  3:33842/1‑145 (MQ=255)                                                                                                                               accgtccCGGA‑CCAGATACTTTCCATCACCACCCGCAAGCTGGTCGTGCACATTGGCCTGTCCTGCTGCGCCTATGCGGTGCTGGACGCCGACGAGGAGGGTTTCACCATTTGCGGCGATGCAGTGACCCCCGGTTCACCACGCCtggt                     <  6:309624/149‑1 (MQ=255)                                                                                                                                 cgaccCGGA‑CCAGATCATGGCCATCACCACCCGCATGCTGGTCGAGCACCTTGGCCTGTCCAGCTGCGCCTATGCGGTGATGGACCCCGACGAGGACGGTTTCACCATTTGCGGCGATGCAGTGACCCCCGGTTCACCACGCCtggtgg                   <  2:238056/149‑1 (MQ=255)                                                                                                                                     ccGGA‑CCAGATCATGGCCATCACCACCCGCATGCTGGTCGAGCACCTTGGCCTGTCCAGCTGCGCCTATGCGGTGATGGACCCCGACGAGGACGGTTTCACCATTTGCGGCGATGCAGTGACCCCCGGtt                                  >  4:129928/1‑130 (MQ=255)                                                                                                                                     ccGGA‑CCAGATCATGGCCATCACCACCCGCATGCTGGTCGAGCACCTTGGCCTGTCCAGCTGCGCCTATGCGGTGATGGACCCCGACGAGGACGGTTTCACCATTTGCGGCGATGCAGTGACCCCCGGtt                                  <  3:129928/130‑1 (MQ=255)                                                                                                                                       ggA‑CCAGATCATGGCCATCACCACCCGCATGCTGGTCGAGCACCTTGGCCTGTCCAGCTGCGCCTATGCGGTGATGGACCCCGACGAGGACGGTTTCACCATTTGCGGCGATGCAGTGACCCCCGGTTCACCACGCCTGGTGGGCCAc              >  3:179177/1‑148 (MQ=255)                                                                                                                                        gA‑CCAGATCATGGCCATCACCACCCGCATGCTGGTCGAGCACCTTGGCCTGTCCAGCTGCGCCTATGCGGTGATGGACCCCGACGAGGACGGTTTCACCATTTGCGGCGATGCAGTGACCCCCGGTTCACCACGCCTGGTGGGCCACTa            >  5:277726/1‑149 (MQ=255)                                                                                                                                        gA‑CCAGATCATGGCCATCACCACCCGCATGCTGGTCGAGCACCTTGGCCTGTCCAGCTGCGCCTATGCGGTGATGGACCCCGACGAGGACGGTTTCACCATTTGCGGCGATCCAGTGACCCCCGGTTCACCACGCCTGGTGGGCCACTa            <  5:151947/149‑1 (MQ=255)                                                                                                                                              gATCATGGCCATCACCACCCGCATGCTGGTCGAGCACCTTGGCCTGTCCAGCTGCGCCTATGCGGTGATGGACCCCGACGAGGACGGTTTCACCATTTGCGGCGATGCAGTGACCCCCGGTTCACCACGCCTGGTGGGCCACTATCAcc       <  3:20481/149‑1 (MQ=255)                                                                                                                                                tCATGGCCATCACCACCCGCATGCTGGTCGAGCACCTTGGCCTGTCCAGCTGCGCCTATGCGGTGATGGACCCCGACGAGGACGGTTTCACCATTTGCGGCGATGCAGt                                             >  7:16908/1‑109 (MQ=255)                                                                                                                                                tCATGGCCATCACCACCCGCATGCTGGTCGAGCACCTTGGCCTGTCCAGCTGCGCCTATGCGGTGATGGACCCCGACGAGGACGGTTTCACCATTTGCGGCGATGCAGt                                             <  8:16908/109‑1 (MQ=255)                                                                                                                                                  aTGGCCATCACCACCCGCATGCTGGTCGAGCACCTTGGCCTGTCCAGCTGCGCCTATGCGGTGATGGACCCCGACGAGGACGGTTTCACCATTTGCGGCGATGCAGTGACCCCCGGTTCACCACGCCTGGTGGGCCACTATCACCTGc    <  6:277726/148‑1 (MQ=255)                                                                                                                                                   tGGCCATCACCACCCGCATGCTGGTCGAGCACCTTGGCCTGTCCAGCTGCGCCTATGCGGTGATGGACCCCGACGAGGACGGTTTCACCATTTGCGGCGATGCAGTGACCCCCGGTTCACCACGCCTGGTGGGCCa               <  7:340970/136‑1 (MQ=255)                                                                                                                                                   tGGCCATCACCACCCGCATGCTGGTCGAGCACCTTGGCCTGTCCAGCTGCGCCTATGCGGTGATGGACCCCGACGAGGACGGTTTCACCATTTGCGGCGATGCAGTGACCCCCGGTTCACCACGCCTGGTGGGCCa               >  8:340970/1‑136 (MQ=255)                                                                                                                                                   tGGCCATCACCACCCGCATGCTGGTCGAGCACCTTGGCCTGTCCAGCTGCGCCTATGCGGTGATGGACCCCGACGAGGACGGTTTCACCATTTGCGGCGATGCAGTGACCCCCGGTTCACCACGCCTGGTGGGCCACTATCACCTGCAt  <  3:122537/149‑1 (MQ=255)                                                                                                                                                      |                                                                                                                                                  CGATTCGCGGCCATGATGGCGAGATTCTGGGCATGCTCGACACGGTCACCGAAACCACCGCCAGCGTGGTCACCAACCAGCGCCTGAACTTTCTCGATACCCTCGGGCGAGCCG‑TGACCGAGGCGACCGACCCGGA‑CCAGATCATGGCCATCACCACCCGCATGCTGGTCGAGCACCTTGGCCTGTCCAGCTGCGCCTATGCGGTGATGGACCCCGACGAGGACGGTTTCACCATTTGCGGCGATGCAGTGACCCCCGGTTCACCACGCCTGGTGGGCCACTATCACCTGCAT  >  NC_002947/4146306‑4146598

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.