New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 5594092 =41 (0.720)7 (0.160) 5/204 NT 22.2% intergenic (‑39/+106) PP_4921/thiC NCS1 family transporter/phosphomethylpyrimidine synthase
?NC_002947 5594185 = 17 (0.380)intergenic (‑132/+13) PP_4921/thiC NCS1 family transporter/phosphomethylpyrimidine synthase

TCAGGCCGATGCCGAGGGAAAACCACAGTGAAAACAGGTCGCGAGCACCGAAAATGCGCTGCTGGATGGGGATTGGATGGTCGGGAGAGAACTGGCTGGGTGATGTCATGGTCATGTCCGCAGGAGTGATGTTAAGTGGCATACACCACCCTGTGGGAGCGGGCTTGCCCGCGAACACCGGCAAAGCCGGTGCCATGCACCGCAGTGCTTGCTTCGCGGGCAAGCCCGCTCCCACAGGGTAAGGTGCTGCGGTTTAGACTTTGTGGTACAGCTGGCTGCCTTCCTGGCGGAACC  >  NC_002947/5593945‑5594238
                                                                                                                                                   |                                                                                                                                                   
cgatgaagatcacccaggaagtgcgtgagtacgctgccaagatcgaggccgtggatgtgacggtcgagcaaggcatgcgtgagcaggccgagcggttccgccaggaaggcagccagctgtaccacaaagtctaaaccgcagcaccttAc                                                                                                                                                    <  4:52042‑M1/2‑1 (MQ=255)
   tgaagatcacccaggaagtgcgtgagtacgctgccaagatcgaggccgtggatgtgacggtcgagcaaggcatgcgtgagcaggccgagcggttccgccaggaaggcagccagctgtaccacaaagtctaaaccgcagcaccttACCCt                                                                                                                                                 <  7:248883‑M1/5‑1 (MQ=255)
      cGATGCCGAGGGAAAACCACAGTGAAAACAGGTCGCGAGCACCGAAAATGCGCTGCTGGATGGGGATTGGATGGTCGGGAGAGAACTGGCTGGGTGATGTCATGGTCATGTCCGCAGGAGTGATGTTAAGTGGCATACACCACCCtgtg                                                                                                                                              <  3:63673/149‑1 (MQ=255)
      cGATGCCGAGGGAAAACCACAGTGAAAACAGGTCGCGAGCACCGAAAATGCGCTGCTGGATGGGGATTGGATGGTCGGGAGAGAACTGGCTGGGTGATGTCATGGTCATGTCCGCAGGAGTGATGTTAAGTGGCATACACCACCCtgtg                                                                                                                                              <  7:275352/149‑1 (MQ=255)
       gatcacccaggaagtgcgtgagtacgctgccaagatcgaggccgtggatgtgacggtcgagcaaggcatgcgtgagcaggccgagcggtaccgccaggaaggcagccagctgtaccacaaagtctaaaccgcagcaccttACCCTGTgg                                                                                                                                             <  2:45784‑M1/9‑1 (MQ=255)
          gCCGAGGGAAAACCACAGTGAAAACAGGTCGCGAGCAACGAAATTGCGCTGCTGGATGGGGATTGGATGGTCGGGAGAGAACTGGCTGGGTGATGTCATTGTCATGTCCGCAGGAGTGATGTTAAGTGGCATACACCACCCTGTGGGAg                                                                                                                                          >  7:123085/1‑149 (MQ=255)
           acccaggaagtgcgtgagtacgctgccaagatcgaggccgtggatgtgacggtcgagcaaggcatgcgtgagcaggccgagcggttccgccaggaaggcagccagctgtaccacaaagtctaaaccgcatcaccttACCCTGTGGGAg                                                                                                                                          >  6:193744‑M1/137‑148 (MQ=255)
           acccaggaagtgcgtgagtacgctgccaagatcgaggccgtggatgtgacggtcgagcaaggcatgcgtgagcaggccgagcggttccgccaggaaggcagccagctgtaccacaaagtctaaaccgcagcaccttACCCTGTGGGAGc                                                                                                                                         <  2:183941‑M1/13‑1 (MQ=255)
             ccaggaagtgcgtgagtacgctgccaagatcgaggccgtggatgtgacggtcgagcaaggcatgcgtgagcaggccgagcggttccgccaggaaggcagccagctgtaccacaaagtctaaaccgcagcaccttACCCTGTGGGAGCgg                                                                                                                                       <  4:127899‑M1/15‑1 (MQ=255)
             ccaggaagtgcgtgagtacgctgccaagatcgaggccgtggatgtgacggtcgagcaaggcatgcgtgagcaggccgagcggttccgccaggaaggcagccagctgtaccacaaagtctaaaccgcagcaccttACCCTGTGGGAGCgg                                                                                                                                       <  3:304820‑M1/15‑1 (MQ=255)
              aGGGAAAACCACAGTGAAAACAGGTCGCGAGCACCGAAAATGCGCTGCTGGATGGGGATTGGATGGTCGGGAGAGAACTGGCTGGGTGATGTCATGGTCATGTCCGCAGGAGTGATGTTAAGTGGCATACACCACCCTGTGGGAGCggg                                                                                                                                      <  8:70189/149‑1 (MQ=255)
               aggaagtgcgtgagtacgctgccaagatcgaggccgtggatgtgacggtcgagcaaggcatgcgtgagcaggccgagcggttccgccaggaaggcagccagctgtaccacaaagtctaaaccgcagcaccttACCCTGTGGGAGCGGGc                                                                                                                                     <  6:60412‑M1/17‑1 (MQ=255)
                   agtgcgtgagtacgctgccaagatcgaggccgtggatgtgacggtcgagcaaggcatgcgtgagcaggccgagcggttccgccaggaaggcagccagctgtaccacaaagtctaaaccgcagcaccttACCCTGTGGGAGCGGGc                                                                                                                                     <  5:11785‑M1/17‑1 (MQ=255)
                   agtgcgtgagtacgctgccaagatcgaggccgtggatgtgacggtcgagcaaggcatgcgtgagcaggccgagcggttccgccaggaaggcagccagctgtaccacaaagtctaaaccgcagcaccttACCCTGTGGGAGCGGGc                                                                                                                                     >  6:11785‑M1/129‑145 (MQ=255)
                    aaCCACAGTGAAAACAGGTCGCGAGCACCGAAAATGCGCTGCTGGATGGGGATTGGATGGTCGGGAGAGAACTGGCTGGGTGATGTCATGGTCATGTCCGCAGGAGTGATGTTAAGTGGCATACACCACCCTGTGGGAGCGGGCTTGcc                                                                                                                                >  5:370024/1‑149 (MQ=255)
                       cgtgagtacgctgccaagatcgaggccgtggatgtgacggtcgagcaaggcatgcgtgagcaggccgagcggttccgccaggaaggcagccagctgtaccacaaagtctaaaccgcagcaccttACCCTGTGGGAGCGGGCTTGCCcgc                                                                                                                             >  3:52042‑M1/125‑149 (MQ=255)
                         tgagtacgctgccaagatcgaggccgtggatgtgacggtcgagcaaggcatgcgtgagcaggccgagcggttccgccaggaaggcagccagctgtaccacaaagtctaaaccgcagcaccttACCCTGTGGGAGCGGGCTTGCCcgcg                                                                                                                            <  2:65710‑M1/26‑1 (MQ=255)
                           agtacgctgccaagatcgaggccgtggatgtgacggtcgagcaaggcatgcgtgagcaggccgagcggttccgccaggaaggcagccagctgtaccacaaagtctaaaccgcagcaccttACCCTGTGGGAGCGGGCTTGCCCGCGaa                                                                                                                          >  1:99955‑M1/121‑148 (MQ=255)
                            tGAAAACAGGTCGCGAGCACCGAAAATGCGCTGCTGGATGGGGATTGGATGGTCGGGAGAGAACTGGCTGGGTGATGTCATGGTCATGTCCGCAGGAGTGATGTTAAGTGGCATACACCACCCTGTGGGAGCGGGCTTGCCCGCGAaca                                                                                                                        >  8:172466/1‑149 (MQ=255)
                            tGAAAACAGGTCGCGAGCACCGAAAATGCGCTGCTGGATGGGGATTGGATGGTCGGGAGAGAACTGGCTGGGTGATGTCATGGTCATGTCCGCAGGAGTGATGTTAAGTGGCATACACCACCCTGTGGGAGCGGGCATGCCCGCGAaca                                                                                                                        >  3:300408/1‑149 (MQ=255)
                              aaaaCAGGTCGCGAGCACCGAAAATGCGCTGCTGGATGGGGATTGGATGGTCGGGAGAGAACTGGCTGGGTGATGTCATGGTCATGTCCGCAGGAGTGATGTTAAGTGGCATACACCACCCTGTGGGAGCGGGCTTGCCCGCGAACAcc                                                                                                                      <  6:237845/149‑1 (MQ=255)
                                aaCAGGTCGCGAGCACCGAAAATGCGCTGCTGGATGGGGATTGGATGGTCGGGAGAGAACTGGCTGGGTGATGTCATGGTCATGTCCGCAGGAGTGATGTTAAGTGGCATACACCACCCTGTGGGAGCGGCCTTGCCCGCGAACACCgg                                                                                                                    <  7:172466/149‑1 (MQ=255)
                                    ccaagatcgaggccgtggatgtgacggtcgagcaaggcatgcgtgagcaggccgagcggttccgccaggaaggcagccagctgtaccacaaagtctaaaccgcagcaccttACCCTGTGGGAGCGGGCTTGCCCGCGa                                                                                                                           >  4:220355‑M1/112‑138 (MQ=255)
                                    ccaagatcgaggccgtggatgtgacggtcgagcaaggcatgcgtgagcaggccgagcggttccgccaggaaggcagccagctgtaccacaaagtctaaaccgcagcaccttACCCTGTGGGAGCGGGCTTGCCCGCGa                                                                                                                           <  3:220355‑M1/27‑1 (MQ=255)
                                     caagatcgaggccgtggatgtgacggtcgagcaaggcatgcgtgagcaggccgagcggttccgccaggaaggcagccagctgtaccacaaagtctaaaccgcagcacctcACCCTGTGGGAGCGGGCTTGCCCGCGAACACCGGCAAAg                                                                                                               <  7:46785‑M1/39‑1 (MQ=255)
                                          gAGCACCGAAAATGCGCTGCTGGATGGGGATTGGATGGTCGGGAGAGAACTGGCTGGGTGATGTCATGGTCATGTCCGCAGGAGTGATGTTAAGTGGCATACACCACCCTGTGGGAGCGGGCTTGCCCGCGAACACCGGCAAAGCCGGt                                                                                                         <  6:83526/149‑1 (MQ=255)
                                             aggccgtggatgtgacggtcgagcaaggcatgcgtgagcaggccgagcggttccgccaggaaggcagccagctgtaccacaaagtctaaaccgcagcaccttACCCTGTGGGAGCGGGCTTGCCCGCGAACACCGGCAAAGCCGGTGcc                                                                                                      >  8:143988‑M1/103‑149 (MQ=255)
                                                cGAAAATGCGCTGCTGGATGGGGATTGGATGGTCGGGAGAGAACTGGCTGGGTGATGTCATGGTCATGTCCGCAGGAGTGATGTTAAGTGGCATACACCACCCTGTGGGAGCGGGCTTGCCCGCGAACACCGGCAAAGCCGGTGCCATg                                                                                                   >  8:92992/1‑149 (MQ=255)
                                                  aaaaTGCGCTGCTGGATGGGGATTGGATGGTCGGGAGAGAACTGGCTGGGTGATGTCATGGTCATGTCCGCAGGAGTGATGTTAAGTGGCATACACCACCCTGTGGGAGCGGGCTTGCCCGCGAACACCGGCAAAGCCGGTGCCATGCa                                                                                                 >  5:2276/1‑149 (MQ=255)
                                                   aaaTGCGCTGCTGGATGGGGATTGGATGGTCGGGAGAGAACTGGCTGGGTGATGTCATGGTCATGTCCGCAGGAGTGATGTTAAGTGGCATACACCACCCTGTGGGAGCGGGCTTGCCCGCGAACACCGGCAAAGCCGGTGCCATGCAc                                                                                                >  1:216782/1‑149 (MQ=255)
                                                           tgctgGATGGGGATTGGATGGTCGGGAGAGAACTGGCTGGGTGATGTCATGGTCATGTCCGCAGGAGTGATGTTAAGTGGCATACACCACCCTGTGGGAGCGGGCTTGCCCGCGAACACCGGCAAAGCCGGTGCCATGCACCGCa                                                                                            <  8:64345/145‑1 (MQ=255)
                                                           tgctgGATGGGGATTGGATGGTCGGGAGAGAACTGGCTGGGTGATGTCATGGTCATGTCCGCAGGAGTGATGTTAAGTGGCATACACCACCCTGTGGGAGCGGGCTTGCCCGCGAACACCGGCAAAGCCGGTGCCATGCACCGCa                                                                                            >  7:64345/1‑145 (MQ=255)
                                                              tgGATGGGGATTGGATGGTCGGGAGAGAACTGGCTGGGTGATGTCATGGTCATGTCCGCAGGAGTGATGTTAAGTCGCATACACCACCCTGTGGGAGCGGGCTTGCCCGCGAACACCCGCAAAGCCGGTGCCATGCACCGCAGtgcttg                                                                                     >  7:250142/1‑149 (MQ=255)
                                                                   gcaaggcatgcgtgagcaggccgagcggttccgccaggaaggcagccagctgtaccacaaagtctaaaccgcagcaccttACCCTGTGGGAGCGGGCTTGCCCGCGAACACCGGCAAAGCCGGTGCCATGCACCGCAGTGCTTGCTTcg                                                                                <  7:77342‑M1/69‑1 (MQ=255)
                                                                    gggATTGGATGGTCGGGAGAGAACTGGCTGGGTGATGTCATGGTCATGTCCGCAGGAGTGATGTTAAGTGGCATACACCACCCTGTGGGAGCGGGCTTGCCCGCGAACACCGGCAAAGCCGGTGCCATGCACCGCAGTGCTTGCTTcgc                                                                               <  7:219755/149‑1 (MQ=255)
                                                                     aaggcatgcgtgagcaggccgagcggttccgccaggaaggcagccagctgtaccacaaagtctaaaccgcagcaccttACCCTGTGGGAGCGGGCTTGCCCGCGAACACCGGCAAAGCCGGTGCAATGCACCGCAGTGCTTGCTTcgcg                                                                              >  4:258468‑M1/79‑149 (MQ=255)
                                                                     aaggcatgcgtgagcaggccgagcggtaccgccaggaaggcagccagctgtaccacaaagtctaaaccgcagcaccttACCCTGTGGGAGCGGGCTTGCCCGCGAACACCGGCAAAGCCGGTGCCATGCACCGCAGTGCTTGCTTcgcg                                                                              >  1:45784‑M1/79‑149 (MQ=255)
                                                                      aggcatgcgtgagcaggccgagcggttccgccaggaaggcagccagctgtaccacaaagtctaaaccgcagcaccttACCCTGTGGGAGCGGGCTTGCCCGCGAACACCGGCAAAGCCGGTGCCATGCACCGCAGTGCTTGCTTCGCgg                                                                             >  8:77342‑M1/78‑149 (MQ=255)
                                                                      aggcatgcgtgagcaggccgagcggttccgccaggaaggcagccagctgtaccacaaagtctaaaccgcagcacctcACCCTGTGGGAGCGGGCTTGCCCGCGAACACCGGCAAAGCCGGTGCCATGCACCGCAGTGCTTGCTTCGCgg                                                                             >  8:46785‑M1/78‑149 (MQ=255)
                                                                           gATGGTCGGGAGAGAACTGGCTGGGTGATGTCATGGTCATGTCCGCAGGAGTGATGTTAAGTGGCATACACCACCCTGTGGGAGCGGGCTTGCCCGCGAACACCGGCAAAGCCGGTGCCATGCACCGCAGTGCTTGCTTCGCGGGCAAg                                                                        >  2:237265/1‑149 (MQ=255)
                                                                                    gagagaACTGGCTGGGTGATGTCATGGTCATGTCCGCAGGAGTGATGTTAAGTGGCATACACCACCCTGTGGGAGCGGGCTTTCCCGCGAACACCGGCAAAGCCGGTTCCATGCACCGCAGTGCTTTCTTAGCGGGCAAGCCCGCTcc                                                                >  3:234444/1‑148 (MQ=255)
                                                                                    gagagaACTGGCTGGGTGATGTCATGGTCATGTCCGCAGGAGTGATGTTAAGTGGCATACACCACCCTGTGGGAGCGGGCTTGCCCGCGAACACCGGCAAAGCCGGTGCCATGCACCGCAGTGCTTGCTTcgc                                                                               >  5:271150/1‑133 (MQ=255)
                                                                                    gagagaACTGGCTGGGTGATGTCATGGTCATGTCCGCAGGAGTGATGTTAAGTGGCATACACCACCCTGTGGGAGCGGGCTTGCCCGCGAACACCGGCAAAGCCGGTGCCATGCACCGCAGTGCTTGCTTcgc                                                                               <  6:271150/133‑1 (MQ=255)
                                                                                         aaCTGGCTGGGTGATGTCATGGTCATGTCCGCAGGAGTGATGTTAAGTGGCATACACCACCCTGTGGGAGCGGGCTTGCCCGCGCAAACCCGCAAAGCCGGTGCCATGCACCGCAGTGCTTGCTTCGCCGGCAAGCCCGCTACCCCAgg                                                          >  1:183941/1‑149 (MQ=37)
                                                                                         aaCTGGCTGGGTGATGTCATGGTCATGTCCGCAGGAGTGATGTTAAGTGGCATACACCACCCTGTGGGAGCGGGCTTGCCCGCGAACACCGGCAAAGCCGGTGCCa                                                                                                     <  6:280996/106‑1 (MQ=255)
                                                                                         aaCTGGCTGGGTGATGTCATGGTCATGTCCGCAGGAGTGATGTTAAGTGGCATACACCACCCTGTGGGAGCGGGCTTGCCCGCGAACACCGGCAAAGCCGGTGCCa                                                                                                     >  5:280996/1‑106 (MQ=255)
                                                                                         aaCTGGCTGGGTGATGTCATGGTCATGTCCGCAGGAGTGATGTTAAGTGGCATACACCACCCTGTGGGAGCGGGCTTGCCCGCGAACACCGGCAAAGCCGGTGCCATGCACCGCAGTGCTTGCTTCGCGGGc                                                                           >  3:330224/1‑132 (MQ=255)
                                                                                         aaCTGGCTGGGTGATGTCATGGTCATGTCCGCAGGAGTGATGTTAAGTGGCATACACCACCCTGTGGGAGCGGGCTTGCCCGCGAACACCGGCAAAGCCGGTGCCATGCACCGCAGTGCTTGCTTCGCGGGc                                                                           <  4:330224/132‑1 (MQ=255)
                                                                                              gctggGTGATGTCATGGTCATGTCCGCAGGAGTGATGTTAAGTGGCATACACCACCCTGTGGGAGCGGGCGTGCACCCCAACAACAGCAACGCCCGGGGCCAGAACACGACTGCTTGCGTAGCGGGCCACCCCGCGACCACACGGttat                                                     >  6:199412/1‑146 (MQ=255)
                                                                                                     gATGTCATGGTCATGTCCGCAGGAGTGATGTTAAGTGGCATACACCACCCTGTGGGAGCGGGCTTGCCCGCGAACACCGGCAAAGCCGGTg                                                                                                        <  8:42570/91‑1 (MQ=255)
                                                                                                     gATGTCATGGTCATGTCCGCAGGAGTGATGTTAAGTGGCATACACCACCCTGTGGGAGCGGGCTTGCCCGCGAACACCGGCAAAGCCGGTg                                                                                                        >  7:42570/1‑91 (MQ=255)
                                                                                                      aTGTCATGGTCATGTCCGCAGGAGTGATGTTAAGTGGCATACACCACCCTGTGGGAGCGGGCTTGCCCGCTAACACCGGCAAAGCCGGTGCCATGCACCGCAGTGCTTGCTTCGCGAGCAAGCCCGCTCCCACAGGGTAAGGTGCTGCg                                             <  6:2276/149‑1 (MQ=255)
                                                                                                      aTGTCATGGTCATGTCCGCAGGAGTGATGTTAAGTGGCATACACCACCCTGTGGGAGCGGGCTTGCCCGCGAACACCGGCAAAGCCGGTGCCATGCACCGCAGTTCTTGCTTAGCGGGCAAGCCCGCTCCCACAGGGTAAGGtgctggg                                             >  4:202818/1‑147 (MQ=255)
                                                                                                        gtgatggtctggTCGGCTGGAGTGATGTTTCGTGGCATACACCACCCGGTGGGAGCGGGGTGGCCCGCTAACACGGGCAACGCGGGTGCCATGCACCGCAGTGGTTGGTGCGCGGGCATGCCCGCTCCCACAGGGTAAGGTGCTGCgg                                            <  4:300408/145‑1 (MQ=21)
                                                                                                               tcatgTCCGCAGGAGTGATGTTAAGTGGCATACACCACCCTGTGGGAGCGGGCTTGCCCGCGAACACCGGCAAAGCCGGTGCCAAGCAACGCAGTGCTTGCTTCGCGGGCAAGCCCGCTACCACAGCGTAAGGTGCTGCGGTTTAGaat                                    >  5:94374/1‑147 (MQ=255)
                                                                                                                 atgTCCGCAGGAGTGATGTTAAGTGGCATACACCACCCTGTGGGAGCGGGCTTGCCCGCGAACACCGGCAAAGCCGGTGCCATGCACCGCAGTGCTTGCTTCGCgg                                                                             >  5:147250/1‑106 (MQ=255)
                                                                                                                 atgTCCGCAGGAGTGATGTTAAGTGGCATACACCACCCTGTGGGAGCGGGCTTGCCCGCGAACACCGGCAAAGCCGGTGCCATGCACCGCAGTGCTTGCTTCGCgg                                                                             <  6:147250/106‑1 (MQ=255)
                                                                                                                    tCCGCAGTAGTTTTGTTAAGTGGCATACACCACCCTGTGGGAGCGGGCTTGCCCGCGAACACCGGCAAAGCCGGTGCCATGCACCGCAGTGCTTGCTTCGCGGGCAAGCCCGCTCCCACAGGGTAAGGTGCTGCGGTTTAGACTTtgtg                               <  2:216782/149‑1 (MQ=255)
                                                                                                                        cAGGAGTGATGTTAAGTGGCATACACCACCCTGTGGGAGCGGGCTTGCCCGCGAACAACGGCAAAGCCGGGGCCATGCACCGCAGTGGTTGCTTAGCGGGCAAGCCCGCTCCCACAGGGTAAGGTGCGGGGGTTTAGACTTTGTGGTa                            >  6:130426/1‑148 (MQ=37)
                                                                                                                         aGGAGTGATGTTAAGTGGCATACACCACCCTGTGGGAGCGGGCTTGCCCGCGAACACCGGCAAAGCCGGTGCCATGCACCGCAGTGCTTGCTTCGCGGGCAAGCCCGCTCCCACAGGGTAAGGTGCTGCGGTTTAGACTTTGTGGTACa                          <  7:92992/149‑1 (MQ=255)
                                                                                                                            aGTGATGTTAAGTGGCATACACCACCCTGTGGGAGCGGGCTTGCCCGCGAACACCGGCAAAGCCGGTGCCATGCACCGCAGTGCTTGCTTCGCGGGCAAGCCCGCTCCCACAGGGTAAGGTGCTGCGGTTTAGACTTTGTGGTACAgct                       <  6:370024/149‑1 (MQ=255)
                                                                                                                               gATGTTAAGTGGCATACACCACCCTGTGGGAGCGGGCTTGCCCGCGAACACCGGCAAAGCCGGTGCCATGCACCGCAGTGCTTGCTTCGCGGGCAAGCCCGCTCCCACAGGGTAAGGTGCTGCGGTTTAGACTTTGTGGTACAgctggc                    >  7:336658/1‑149 (MQ=255)
                                                                                                                                   ttAAGTGGCATACACCACCCTGTGGGAGCGGGCTTGCCCGCGAAAACCGGCAAAGCCGGTGCCATGCACCGCAGTGCTTGCTTCGCGGGCAAGCCCGCTCCcaca                                                            >  3:39191/1‑105 (MQ=255)
                                                                                                                                                 ccaccCTGTGGGAGCGGGCTTGCCCGCGAACACCGGCAAAGCCGGTGACATGCACCGCAGTGCTTGCTTCGCGGGCAAGCCCGCTCCCACAGGGTAAGGTGCTGCGGTTTAGGCTTTGTGGTAGAGCTGGCTGCCTTCCTGGCGGAAcc  >  3:220809/1‑149 (MQ=255)
                                                                                                                                                  caccCTGTGGGAGCGGGCTTGCCCGCGAACACCGGCAAAGCCGGTGCCATGCACCGCAGtgcttgc                                                                                    >  7:8645/1‑66 (MQ=255)
                                                                                                                                                  caccCTGTGGGAGCGGGCTTGCCCGCGAACACCGGCAAAGCCGGTGCCATGCACCGCAGtgcttgc                                                                                    <  8:8645/66‑1 (MQ=255)
                                                                                                                                                   |                                                                                                                                                   
TCAGGCCGATGCCGAGGGAAAACCACAGTGAAAACAGGTCGCGAGCACCGAAAATGCGCTGCTGGATGGGGATTGGATGGTCGGGAGAGAACTGGCTGGGTGATGTCATGGTCATGTCCGCAGGAGTGATGTTAAGTGGCATACACCACCCTGTGGGAGCGGGCTTGCCCGCGAACACCGGCAAAGCCGGTGCCATGCACCGCAGTGCTTGCTTCGCGGGCAAGCCCGCTCCCACAGGGTAAGGTGCTGCGGTTTAGACTTTGTGGTACAGCTGGCTGCCTTCCTGGCGGAACC  >  NC_002947/5593945‑5594238

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.