New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5863595	56 (0.990)	5 (0.090)	4/252	NT	8.1%	coding (294/870 nt)	PP_5138	LysR family transcriptional regulator
	?	NC_002947	= 5863625	59 (1.070)					coding (264/870 nt)	PP_5138	LysR family transcriptional regulator

GCGGCAATGTCCACCCGGTAATCCTCGAGCATTTCCAGCACCTGCTGCGAGTTGCCGATCTCCACCGCCACTTCAACCTGCGGCAGGCGTTCGCGATAGATCTTGACCAGGTCGAGAATGTAGTAAGGCGCAGTGGCAGCAATGCGCAG‑GCTGCC‑CTGGGCCTGGCCACTGTTGCGCAGCTCGAACTCGATGTCGGCTTCCTGCTGCAGCAGCGCCTTGACCATCGGCAGCAGGCGTAAGCCCTCCTCGCTCAACACCAGGCGCCGCCCGCCGCGGT  >  NC_002947/5863467‑5863743                                                                                                                                 |                                                                                                                                                       gcgGCAATGTCCACCCGGTAATCCTCGAGCATTTCCAGCACCTGCTGCGAGTTGCCGATCTCCACCGCCACTTCAACCTGCGGCAGGCGTTCGCGATAGATCTTGACCAGGTCGAGAATGTAGTAAGGCGCAGTGGCAGCAATGCGCAg                                                                                                                                    <  1:231549/149‑1 (MQ=255) gcgGCAATGTCCACCCGGTAATACTCGAGCATTTCAAGCACATGCTGCGAGTTGCCGATCTCCACCGCCACTTCAACCTGCGGCAGGCGTTCGCGATAGATCTTGACCAGGTCGAGAATGTAGTAAGGCGCAGTGGCAGCAATGCGCAg                                                                                                                                    >  3:152753/1‑149 (MQ=255)      aaTGTCCACCCGGTAATCCTCGAGCATTTCCAGCACCTGCTGCGAGTTGCCGATCTCCACCGCCACTTCAACCTGCGGCAGGCGTTCGCGATAGATCTTGACCAGGTCGAGAATGTAGTAAGGCGCAGTGGCAGCAATGCGCAG‑GCTGc                                                                                                                              <  3:200278/149‑1 (MQ=255)          tCCACCCGGTAATCCTCGAGCATTTCCAGCACCTGCTGCGAGTTGCCGATCTCCACCGCCACTTCAACCTGCGGCAGGCGTTCGCGATAGATCTTGACCAGGTCGAGAATGTAGTAAGGCGCAGTGGCAGCAATGCGCAG‑GCTGCC‑Ct                                                                                                                          <  5:282514/148‑1 (MQ=255)          tCCACCCGGTAATCCTCGAGCATTTCCAGCACCTGCTGCGAGTTGCCGATCTCCACCGCCACTTCAACCTGCGGCAGGCGTTCGCGATAGATCTTGACCAGGTCGAGAATGTAGTAAGGCGCAGTGGCAGCAATGCGCAG‑GCTGCC‑CTg                                                                                                                         >  2:289978/1‑149 (MQ=255)           caaCCCGGTAATCATCGAGCATTTCCACCACCTGCTGCGAGTTGCCGATCTCCACCGCCACTTCAACCTGCGGCAGGCGATCGCGATAGATCTTGACCAGGTCGAGAATGTAGTAAGGCGCAGTGGCAGCAAAGCTCAG‑GCTGCC‑CTgg                                                                                                                        >  2:71189/3‑149 (MQ=255)            cACCCGGTAATCCTCGAGCATTTCCAGCACCTGCTGCGAGTTGCCGATCTCCACCGCCACTTCAACCTGCGGCAGGCGTTCGCGATAGATCTTGACCAGGTCGAGAATGTAGTAAGGCccagggcagcctgcgcattgctgccactgcg                                                                                                                         >  2:341074‑M1/1‑118 (MQ=255)             aCCCGGTAATCCTCGAGCATTTCCAGCACCTGCTGCGAGTTGCCGATCTCCACCGCCACTTCAACCTGCGGCAGGCGTTCGCGATAGATCTTGACCAGGTCGAGAATGTAGTAAGGCccagggcagcctgcgcattgctgccactgcgc                                                                                                                        <  1:341074‑M1/149‑33 (MQ=255)               ccGGTAATCCTCGAGCATTTCCAGCACCTGCTGCGAGTTGCCGATCTCCACCGCCACTTCAACCTGCGGCAGGCGTTCGCGATAGATCTTGACCAGGTCGAGAATGTAGTAAGGCGCAGTGGCAGCAATGCGCAG‑GCTGCC‑CTGGgcct                                                                                                                    >  3:339512‑M2/1‑145 (MQ=255)                 ggTAATCCTCGAGCATTTCCAGCACCTGCTGCGAGTTGCCGATCTCCACCGCCACTTCAACCTGCGGCAGGCGTTCGCGATAGATCTTGACCAGGTCGAGAATGTAGTAAGGCGCAGTGGCAGCAATGAGCAG‑GCTGCC‑CTGGGCCTgg                                                                                                                  >  1:362570/1‑149 (MQ=255)                  gTAATCCTCGAGCATTTCCAGCACCTGCTGCGAGTTGCCGATCTCCACCGCCACTTCAACCTGCGGCAGGCGTTCGCGATAGATCTTGACCAGGTCGAGAATGTAGTAAGGCGCAGTGGCAGCAATGCGCAG‑GCTGCC‑CTGGGCCTGGc                                                                                                                 >  1:202676/1‑149 (MQ=255)                  gTAATCCTCGAGCATTTCCAGCACCTGCTGCGAGTTGCAGATCTCCACCGCCACTTCAACCTGCGGCAGGCGTTCGCGATAGATCTTGACAAGGTCGAGAATGTAGTAATGCGCAGTGGCAGCAATGCGCAG‑TCTGCC‑CTGGGACTGGc                                                                                                                 >  2:233053/1‑149 (MQ=255)                     aTCCTCGAGCATTTCCAGCACCTGCTGCGAGTTGCCGATCTCCACCGCCACTTCAACCTGCGGCAGGCGTTCGCGATAGATCTTGACCAGGTCGAGAATGTAGTAAGGCCCAG‑GGCAGCC‑TGCGCATTGCTGCCACTGCgccttactac                                                                                                              >  5:152916‑M2/1‑139 (MQ=255)                         tCGAGCATTTCCAGCACCTGCTGCGAGTTGCCGATCTCCACCGCCACTTCAACCTGCGGCAGGCGTTCGCGATAGATCTTGACCAGGTCGAGAATGTAGTAAGGCGCAGTGGCAGCAATGCGCAG‑GCTGCC‑CTGGgc                                                                                                                      >  3:296934‑M2/1‑135 (MQ=255)                         tCGAGCATTTCCAGCACCTGCTGCGAGTTGCCGATCTCCACCGCCACTTCAACCTGCGGCAGGCGTTCGCGATAGATCTTGACCAGGTCGAGAATGTAGTAAGGCGCAGTGGCAGCAATGCGCAG‑GCTGCC‑CTGGgc                                                                                                                      <  4:296934‑M2/137‑3 (MQ=255)                            aGCATTTCCAGCACCTGCTGCGAGTTGCCGATCTCCACCGCCACTTCAACCTGCGGCAGGCGTTCGCGATAGATCTTGACCAGGTCGAGAATGTAGTAAGGCGCAGTGGCAGCAATGCGCAG‑GCTGCC‑CTGGGCCTGGCCACTGTTgcg                                                                                                       >  4:356949/1‑149 (MQ=255)                                tttCCAGCACCTGCTGCGAGTTGCCGATCTCCACCGCCACTTCAACCTGCGGCAGGCGTTCGCGATAGATCTTGACCAGGTCGAGAATGTAGTAAGGCGCAGTGGCAGCAATGCGCAG‑GCTGCC‑CTGGGCCTGGCCACTGTTGCGCAGc                                                                                                   >  6:66585/1‑149 (MQ=255)                                 ttCCAGCACCTGCTGCGAGTTGCCGATCTCCACCGCCACTTCAACCTGCGGCAGGCGTTCGCGATAGATCTTGACCAGGTCGAGAATGTAGTAAGGCGCAGTGGCAGCAATGCGCAG‑GCTGCC‑CTGGGCCTGGCCACTGTTGCGCAGCt                                                                                                  >  6:88252/1‑149 (MQ=255)                                    cAGCACCTGCTGCGAGTTGCCGATCTCCACCGCCACTTCAACCTGCGGCAGGCGTTCGCGATAGATCTTGACCAGGTCGAGAATGTAGTAAGGCGCAGTGGCAGCAATGCGCAG‑GCTGCC‑CTGGGCCTGGCCACTGTTg                                                                                                         >  1:149797/1‑139 (MQ=255)                                    cAGCACCTGCTGCGAGTTGCCGATCTCCACCGCCACTTCAACCTGCGGCAGGCGTTCGCGATAGATCTTGACCAGGTCGAGAATGTAGTAAGGCGCAGTGGCAGCAATGCGCAG‑GCTGCC‑CTGGGCCTGGCCACTGTTg                                                                                                         <  2:149797/139‑1 (MQ=255)                                    cAGCACCTGCTGCGAGTTGCCGATCTCCACCGCCACTTCAACCTGCGGCAGGCGTTCGCGATAGATCTTGACCAGGTCGAGAATGTAGTAAGGCGCAGTGGCAGCAATGCGCAG‑GCTGCC‑CTGGGCCTGGCCACTGTTGCGCAGCTCg                                                                                                <  3:356949/148‑1 (MQ=255)                                       cACCTGCTGCGAGTTGCCGATCTCCACCGCCACTTCAACCTGCGGCAGGCGTTCGCGATAGATCTTGACCAGGTCGAGAATGTAGTAAGGCGCAGTGGCAGCAATGCGCAG‑GCTGCC‑CTGGGCCTGGCCACTGTTGCGCAGCTCGAACt                                                                                            >  4:86852/1‑149 (MQ=255)                                        aCCTGCTGCGAGTTGCCGATCTCCACCGCCACTTCAACCTGCGGCAGGCGTTCGCGATAGATCTTGACCAGGTCGAGAATGTAGTAAGGCGCAGTGGCAGCAATGCGCAG‑GCTGCC‑CTGGGCCTGGCCACTGTTGCGCAGCTCGAACTc                                                                                           >  8:234089/1‑149 (MQ=255)                                         ccTGCTGCGAGTTGCCGATCTCCACCGCCACTTCAACCTGCGGCAGGCGTTCGCGATAGATCTTGACCAGGTCGAGAATGTAGTAAGGCGCAGTGGCAGCAATGCGCAG‑GCTGCC‑CTGGGCCTGGCCACTGTTGCGCAGCTCGAACTCg                                                                                          <  8:265099/149‑1 (MQ=255)                                          ctgctgCGAGTTGCCGATCTCCACCGCCACTTCAACCTGCGGCAGGCGTTCGCGATAGATCTTGACCAGGTCGAGAATGTAGTAAGGCGCAGTGGCAGCAATGCGCAG‑GCTGCC‑CTGGGCCTGGCCACTGTTGCGCAGCTCGAACTCGa                                                                                         >  3:283343/1‑149 (MQ=255)                                             ctgcGAGTTGCCGATCTCCACCGCCACTTCAACCTGCGGCAGGCGTTCGCGATAGATCTTGACCAGGTCGAGAATGTAGTAAGGCGCAGTGGCAGCAATGCGCAG‑GCTGCC‑CTGGGCCTGGCCACTGTTGCGCAGCTCGAACTCGAt                                                                                        <  2:5478/147‑1 (MQ=255)                                               gcGAGTTGCCGATCTCCACCGCCACTTCAACCTGCGGCAGGCGTTCGCGATAGATCTTGACCAGGTCGAGAATGTAGTAAGGCGCAGTGGCAGCAATGCGCAG‑GCTGCC‑CTGGGCCTGGCCACTGTTGCGCAGCTCGAACTCGATGTCg                                                                                    >  7:198338/1‑149 (MQ=255)                                                    ttGCCGATCTCCACCGCCACTTCAACCTGCGGCAGGCGTTCGCTATAGATCTTGACGAGGTCGAGAATGTAGTAAGGCGCAGTGGCAGCAATGCGAAG‑GCTGCC‑CTGGGCCTGGCCACTGTTGCGCAGCTCGAACTCGATGTCGGCTTc                                                                               <  1:71189/149‑1 (MQ=255)                                                    ttGCCGATCTCCACCGCCACTTCAACCTGCGGCAGGCGTTCGCGATAGATCTTGACCAGGTCGAGAATGTAGTAAGGCGCAGTGGCAGCAATGCGCAG‑GCTGCC‑CTGGGCCTGGCCACTGTTGCGCAGCTCGAACTCGATGTCGGCTTc                                                                               >  4:240209/1‑149 (MQ=255)                                                    ttGCCGATCTCCACCGCCACTTCAACCTGCGGCAGGCGTTCGCGATAGATCTTGACCAGGTCGAGAATGTAGTAAGGCGCAGTGGCAGCAATGCGCAG‑GCTGCC‑CTGGGCCTGGCCACTGTTGCGCAGCTCGAACTCGATGTCGGCTTc                                                                               <  2:202676/149‑1 (MQ=255)                                                      gCCGATCTCCACCGCCACTTCAACCTGCGGCAGGCGTTCGCGATAGATCTTGACCAGGTCGAGAATGTAGTAAGGCGCAGTGGCAGCAATGCGCAG‑GCTGCC‑CTGGGCCTGGCCACTGTTGCGCAGCTCGAACTCGATGTCGGCTTCct                                                                             >  1:291746/1‑149 (MQ=255)                                                        cGATCTCCACCGCCACTTCAACCTGCGGCAGGCGTTCGCGATAGATCTTGACCAGGTCGAGAATGTAGTAAGGCccagggcagcctgcgcattgctgccactgcgc                                                                                                                        >  8:74131‑M1/1‑74 (MQ=255)                                                        cGATCTCCACCGCCACTTCAACCTGCGGCAGGCGTTCGCGATAGATCTTGACCAGGTCGAGAATGTAGTAAGGCccagggcagcctgcgcattgctgccactgcgc                                                                                                                        <  7:74131‑M1/106‑33 (MQ=255)                                                               cACCGCCACTTCAACCTGCGGCAGGCGTTCGCGATAGATCTTGACCAGGTCGAGAATGTAGTAAGGCGCAGTGGCAGCAATGCGCAG‑GCTGCC‑CTGGGCCTGGCCACTGTTGCGCAGCTCGAACTCGATGTCGGCTTCCTGCTgcag                                                                      <  5:88252/147‑1 (MQ=255)                                                                aCCGCCACTGCCACCTGCGGCAGGCGTTCGCGAGAGATCTTGACCAGGGAGAGAATGTAGTAAGGCGCAGTGTCAGCAATGCGCAG‑GCTGCC‑CTGGGCCTGGCCACTGTTGCGCAGCTCGAACTCGATGTCGGCTTCCTGCTGcagcag                                                                   <  1:233053/149‑1 (MQ=255)                                                                  cGCCACTTCAACCTGCGGCAGGCGTTCGCGATAGATCTTGACCAGGTCGAGAATGTAGTAAGGCGCAGTGGCAGCAATGCGCAG‑GCTGCC‑CTTGGCCTGGCCACTGTTGCGCAGCTCGAACTCGATGTCTTCTTCCTGCTTCAGCAgcg                                                                 <  4:152753/149‑1 (MQ=255)                                                                        ttCAACCTGCGGCAGGCGTTCGCGATAGATCTTGACCAGGTCGAGAATGTAGTAAGGCGCAGTGGCAGCAATGCGCAG‑GCTGCC‑CTGGGCCTGGCCACTGTTGCGCAGCTCGAACTCGATGTCGGCTTCCTGCTGCAGCAGCGCCTTGa                                                           >  5:228236/1‑149 (MQ=255)                                                                           aaCCTGCGGCAGGCGTTCGCGATAGATCTTGACCAGGTCGAGAATGTAGTAAGGCGCAGTGGCAGCAATGCGCAG‑GCTGCC‑CTGGGCCTGGCCACTGTTGCGCAGCTCGAACTCGATGTCGGCTTCCTGCTGCAGCAGCGCCTTGACCa                                                        >  8:196195/1‑149 (MQ=255)                                                                             ccTGCGGCAGGCGTTCGCGATAGATCTTGACCAGGTCGAGAATGTAGTAAGGCGCAGTGGCAGCAATGCGCAG‑GCTGCC‑CTGGGCCTGGCCACTGTTGCGCAGCTCGAACTCGATGTCGGCTTCCTGCTGCAGCAGCGCCTTGACCATc                                                      <  6:228236/149‑1 (MQ=255)                                                                               tGCGGCAGGCGTTCGCGATAGATCTTGACCAGGTCGAGAATGTAGTAAGGCGCAGTGGCAGCAATGCGCAG‑GCTGCC‑CTGGGCCTGGCCACTGTTGCGCAGCTCGAACTCGATGTCGGCTTCCTGCTGCAGCAGCGCCTTGACCATCgg                                                    >  6:63905/1‑149 (MQ=255)                                                                                    cAGGCGTTCGCGATAGATCTTGACCAGGTCGAGAATGTAGTAAGGCGCAGTGGCAGCAATGCGCAG‑GCTGCC‑CTGGGCCTGGCCACTGTTGCGCAGCTCGAACTCGATGTCGGCTTCCTGCTGCAGCAGCGCCtt                                                             <  1:51459/135‑1 (MQ=255)                                                                                    cAGGCGTTCGCGATAGATCTTGACCAGGTCGAGAATGTAGTAAGGCGCAGTGGCAGCAATGCGCAG‑GCTGCC‑CTGGGCCTGGCCACTGTTGCGCAGCTCGAACTCGATGTCGGCTTCCTGCTGCAGCAGCGCCtt                                                             >  2:51459/1‑135 (MQ=255)                                                                                    cAGGCGTTCGCGATAGATCTTGACCAGGTCGAGAATGTAGTAAGGCGCAGTGGCAGCAATGCGCAG‑GCTGCC‑CTGGGCCTGGCCACTGTTGCGCAGCTCGAACTCGATGTCGGCTTCCTGCTGCAGCAGCGCCTTGACCATCGgcagca                                               <  3:86852/149‑1 (MQ=255)                                                                                    cAGGCGTTCGCGATAGATCTTGACCAGGTCGAGAATGTAGTAAGGCGCAGTGGCAGCAATGCGCAG‑GCTGCC‑ATGGGCCTGGCCACTGTTGCGCAGCTCGAACTCGATGTCGGCTTCCTGCTGCAGCAGCGCCTTGACCATCGgcagca                                               <  4:283343/149‑1 (MQ=255)                                                                                       gCGTTCGCGATAGATCTTGACCAGGTCGAGAATGTAGTAAGGCGCAGTGGCAGCAATGCGCAG‑GCTGCC‑CTGGGCCTGGCCACTGTTGCGCAGCTCGAACTCGATGTCGGCTTCCTGCTGCAGCAGCGCCTTGACCATCGGCAGCAGGc                                            <  6:168971/149‑1 (MQ=255)                                                                                               gATAGATCTTGACCAGGTCGAGAATGTAGTAAGGCGCAGTGGCAGCAATGCGCAG‑GCTGCC‑CTGGGCCTGGCCACTGTTGCGCAGCTCGAACTCGATGTCGGCTTCCTGCTGCAGCAGCGCCTTGACCATCGGCAGCAGGCGTAAGccc                                    >  7:17356/1‑149 (MQ=255)                                                                                               gATAGATCTTGACCAGGTCGAGAATGTAGTAAGGCGCAGTGGCAGCAATGCGCAG‑GCTGCC‑CTGGGCCTGGCCACTGTTGCGCAGCTCGAACTCGATGTCGGCTTCCTGCTGCAGCAGCGCCTTGACCATCGGACGCAGGCGTAAGcc                                     >  4:257563/1‑148 (MQ=255)                                                                                                 tAGATCTTGACCAGGTCGAGAATGTAGTAAGGCGCAGTGgcag                                                                                                                                              >  1:54194/1‑43 (MQ=255)                                                                                                 tAGATCTTGACCAGGTCGAGAATGTAGTAAGGCGCAGTGgcag                                                                                                                                              <  2:54194/43‑1 (MQ=255)                                                                                                 tAGATCTTGACCAGGTCGAGAATGTAGTAAGGCGCAGTGgcag                                                                                                                                              <  2:281364/43‑1 (MQ=255)                                                                                                 tAGATCTTGACCAGGTCGAGAATGTAGTAAGGCGCAGTGGCAGCAATGCGCAG‑GCTGCC‑CTGGGCCTGGCCACTGTTGCGCAGCTCGAACTCGATGTCGGCTTCCTGCTGCAGCAGCGCCTTGACCATCGGcagcag                                              <  3:63090/137‑1 (MQ=255)                                                                                                 tAGATCTTGACCAGGTCGAGAATGTAGTAAGGCGCAGTGGCAGCAATGCGCAG‑GCTGCC‑CTGGGCCTGGCCACTGTTGCGCAGCTCGAACTCGATGTCGGCTTCCTGCTGCAGCAGCGCCTTGACCATCGGcagcag                                              >  4:63090/1‑137 (MQ=255)                                                                                                         gACCAGGTCGAGAATGTAGTAAGGCGCAGTGGCAGCAATGCGCAG‑GCTGCC‑CTGGGCCTGGCCACTGTTGCGCAGCTCGAACTCGATGTCGGCTTCCTGCTGCAGCAGCGCCTTGACCATCGGCAGCAGGCGTAAGCCCTCCTCGCTc                           >  7:307009/1‑148 (MQ=255)                                                                                                              ggTCGAGAATGTAGTAAGGCGCAGTGGCAGCAATGCGCAG‑GCTGCC‑CTGGGCCTGGCCACTGTTGCGCAGCTCGAACTCGATGTCGGCTTCCTGCTGCAGCAGCGCCTTGACAATAGTTATAATGCGTAAGACCTCCTCGCTCAACAcc                     <  2:362570/149‑1 (MQ=255)                                                                                                                tCGAGAATGTAGTAAGGCGCAGTGGCAGCAATGCGCAG‑GCTGCC‑CTGGGCCTGGCCACTGTTGCGCAGCTCGAACTCGATGTCGGCTTCCTGCTGCAGCAGCGCCTTGACCATCGGCAGCAGGCGTAAGccc                                    <  1:16677/132‑1 (MQ=255)                                                                                                                tCGAGAATGTAGTAAGGCGCAGTGGCAGCAATGCGCAG‑GCTGCC‑CTGGGCCTGGCCACTGTTGCGCAGCTCGAACTCGATGTCGGCTTCCTGCTGCAGCAGCGCCTTGACCATCGGCAGCAGGCGTAAGccc                                    >  2:16677/1‑132 (MQ=255)                                                                                                                  gagaATGTAGTAAGGCGCAGTGGCAGCAATGCGCAG‑GCTGCC‑CTGGGCCTGGCCACTGTTGCGCAGCTCGAACTCGATGTCGGCTTCCTGCTGCAGCAGCGCCTTGACCATCGGCAGCAGGCGTAAGCCCTCCTCGCTc                           >  1:277823/1‑139 (MQ=255)                                                                                                                  gagaATGTAGTAAGGCGCAGTGGCAGCAATGCGCAG‑GCTGCC‑CTGGGCCTGGCCACTGTTGCGCAGCTCGAACTCGATGTCGGCTTCCTGCTGCAGCAGCGCCTTGACCATCGGCAGCAGGCGTAAGCCCTCCTCGCTc                           <  2:277823/139‑1 (MQ=255)                                                                                                                  gagaATGTAGTAAGGCGCAGTGGCAGCAATGCGCAG‑GCTGCC‑CTGGGCCTGGCCACTGTTGCGCAGCTCGAACTCGATGTCGGCTTCCTGCTGCAGCAGCGCCTTGACCATCGGCAGCAGGCGTAAGCCCTCCTCGCTCAACACCAGgc                 >  1:21858/1‑149 (MQ=255)                                                                                                                  gagaATGTAGTAAGGCGCAGTGGCAGCAATGCGCAG‑GCTGCC‑CTGGGCCTGGCCACTGTTGCGCAGCTCGAAATCGATGTCGGCTTCCTGCTGCAGCAGCGCCTTGACCAGCGGCAGCAGGCGTAAGCCCTCCTCGCTCAACCCCAGgc                 >  5:209166/1‑149 (MQ=255)                                                                                                                   agaATGTAGTAAGGCGCAGTGGCAGCAATGCGCAG‑GCTGCC‑CTGGGCCTGGCCACTGTTGCGCAGCTCGAACTCGATGTCGGCTTCCTGCTGCAGCAGCGCCTTGACCATCGGCAGCAGGCGTAAGCCCTCCTCGCTCAACACCAGgcg                <  3:240209/149‑1 (MQ=255)                                                                                                                    gaATGTAGTAAGGCGCAGTGGCAGCAATGCGCAG‑GCTGCC‑CTGGGCCTGGCCACTGTTGCGCAGCTCGAACTCGATGTCGGCTTCCTGCTGCAGCAGCGCCTTGACCATCGGCAGCAGGCGTAAGCCCTCCTCGCTCAACACCAGgcgc               >  1:263624/1‑149 (MQ=255)                                                                                                                        gtagtaAGGCgcagtggcagcaatgcgcaggctgccctgggccttactacattctcgacctggtcaagatctatcgcgaacgcctgccgcaggttgaagtggcggtggagatcggcaactcgcagcaggtgctggaaatgctcgaggat             >  5:152916‑M1/1‑10 (MQ=255)                                                                                                                         tagtaAGGCGCAGTGGCAGCAATGCGCAG‑GCTGCC‑CTGGGCCTGGCCACTGTTGCGCAGCTCGAACTCGATGTCGGCTTCCTGCTGCAGCAGCGCCTTGACCATCGGCAGCAGGCGTAAGCCCTCCTCGCTCAACACCAGGCGccgccc          >  7:322997/1‑149 (MQ=255)                                                                                                                           gtaAGGCGCAGTGGCAGCAATGCGCAG‑GCTGCC‑CTGGGCCTGGCCACTGTTGCGCAGCTCGAACTCGATGTCGGCTTCCTGCTGCAGCAGCGCCTTGACCATCGGCATCAGGCGTAAGCCCTCCTCGCTCAACACCAGGCGccgcccg         <  2:263624/148‑1 (MQ=255)                                                                                                                              aGGCccagggcagcctgcgcattgctgccactgcgccttactacattctcgacctggtcaagatctatcgcgaacgcctgccgcaggttgaagtggcggtggagatcggcaactcgcagcaggtgctggaaatgctcgaggattaccgg       >  3:339512‑M1/1‑4 (MQ=255)                                                                                                                              aGGCGCAGTGGCAGCAATGCGCAG‑GCTGCC‑CTGGGCCTGGCCACTGTTGCGCAGCTCGAACTCGATGTCGGCTTCCTGCTGCAGCAGCGCCTTGACCATCGGCAGCAGGCGTAAGCCCTCCTCGCTCAACACCAGGCGCCGCCcgccgc     >  2:266008/1‑149 (MQ=255)                                                                                                                               ggCGCAGTGGCAGCAATGCGCAG‑GCTGCC‑CTGGGCCTGGCCACTGTTGCGCAGCTCGAACTCGATGTCGGCTTCCTGCTGCAGCAGCGCCTTGACCATCGGCAGCAGGCGTAAGCCCTCCTCGCTCAACACCAGGCGCCGCCCGCcgcg    <  5:66585/149‑1 (MQ=255)                                                                                                                                gcgcAGTGGCAGCAATGCGCAG‑GCTGCC‑CTGGgccttactacattctcgacctggtcaagatctatcgcgaacgcctgccgcaggttgaagtggcggtggagatcggcaactcgcagcaggtgctggaaatgctcgaggattaccgggt   <  1:341074‑M2/149‑118 (MQ=255)                                                                                                                                gcgcAGTGGCAGCAATGCGCAG‑GCTGCC‑CTGGgccttactacattctcgacctggtcaagatctatcgcgaacgcctgccgcaggttgaagtggcggtggagatcg                                              <  7:74131‑M2/106‑75 (MQ=255)                                                                                                                                gcgcAGTGGCAGCAATGCGCAG‑GCTGCC‑CTGGgccttactacattctcgacctggtcaagatctatcgcgaacgcctgccgcaggttgaagtggcggtggagatcg                                              >  8:74131‑M2/1‑32 (MQ=255)                                                                                                                                gcgcAGTGGCAGCAATGCGCAG‑GCTGCC‑CTGGGCCTGGCCACTGTTGCGCAGCTCGAACTCGATGTCGGCTTCCTGCTGCAGCAGTGCCTTGACCATCGGCAGCAGGCGTAAGCCCTCCTCGCTCAACACCAGGCGCCGCCCGCCGCgg   <  7:234089/149‑1 (MQ=255)                                                                                                                                gCccagggcagcctgcgcattgctgccactgcgccttactacattctcgacctggtcaagatctatcgcgaacgcctgccgcaggttgaagtggcggtggagatcggcaactcgcagcaggtgctggaaatgctcga                 >  3:296934‑M1/1‑2 (MQ=255)                                                                                                                                gCccagggcagcctgcgcattgctgccactgcgccttactacattctcgacctggtcaagatctatcgcgaacgcctgccgcaggttgaagtggcggtggagatcggcaactcgcagcaggtgctggaaatgctcga                 <  4:296934‑M1/137‑136 (MQ=255)                                                                                                                                 cgcAGTGGCAGCAATGCGCAG‑GCTGCC‑CTGGgccttactacattctcgacctggtcaagatctatcgcgaacgcctgccgcaggttgaagtggcggtggagatcggcaactcgcagcaggtgctggaaatgctcgaggattaccgggtg  >  2:341074‑M2/1‑31 (MQ=255)                                                                                                                                 cgcAGTGGCAGCAATGCGCAG‑GCTGCC‑CTGGGCCTGGCCACTGTTGCGCAGCTCGAACTCGATGTCGGCTTCCTGCTGCAGCAGCGCCTTGACCATCGGCAGCAGGCGTAAGCCCTCCTCGCTCAACACCAGGCGCCGCCCGCCGCgg   >  2:268953/1‑148 (MQ=255)                                                                                                                                 cgcAGTGGCAGCAATGCGCAG‑GCTGCC‑CTGGGCCTGGCCACTGTTGCGCAGCTCGAACTCGATGTCGGCTTCCTGCTGCAGCAGCGCCTTGACCATCGGCAGCAGGCGTAAGCCCTCCTCGCTCAACACCAGGCGCCGCCCGCCGCGGt  <  2:291746/149‑1 (MQ=255)                                                                                                                                 |                                                                                                                                                       GCGGCAATGTCCACCCGGTAATCCTCGAGCATTTCCAGCACCTGCTGCGAGTTGCCGATCTCCACCGCCACTTCAACCTGCGGCAGGCGTTCGCGATAGATCTTGACCAGGTCGAGAATGTAGTAAGGCGCAGTGGCAGCAATGCGCAG‑GCTGCC‑CTGGGCCTGGCCACTGTTGCGCAGCTCGAACTCGATGTCGGCTTCCTGCTGCAGCAGCGCCTTGACCATCGGCAGCAGGCGTAAGCCCTCCTCGCTCAACACCAGGCGCCGCCCGCCGCGGT  >  NC_002947/5863467‑5863743

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.