New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5863595	56 (0.990)	5 (0.090)	4/252	NT	8.1%	coding (294/870 nt)	PP_5138	LysR family transcriptional regulator
	?	NC_002947	= 5863625	59 (1.070)					coding (264/870 nt)	PP_5138	LysR family transcriptional regulator

CCACCCGGTAATCCTCGAGCATTTCCAGCACCTGCTGCGAGTTGCCGATCTCCACCGCCACTTCAACCTGCGGCAGGCGTTCGCGATAGATCTTGACCAGGTCGAGAATGTAGTAAGGCGCAGTGGCAGCAATGCGCAG‑GCTGCC‑CTGGGCCTGGCCACTGTTGCGCAGCTCGAACTCGATGTCGGCTTCCTGCTGCAGCAGCGCCTTGACCATCGGCAGCAGGCGTAAGCCCTCCTCGCTCAACACCAGGCGCCGCCCGCCGCGGTAGAACAGCTCCACGGCGTACTGGCCTTC  >  NC_002947/5863477‑5863771                                                                                                                                                       |                                                                                                                                                   caaCCCGGTAATCATCGAGCATTTCCACCACCTGCTGCGAGTTGCCGATCTCCACCGCCACTTCAACCTGCGGCAGGCGATCGCGATAGATCTTGACCAGGTCGAGAATGTAGTAAGGCGCAGTGGCAGCAAAGCTCAG‑GCTGCC‑CTgg                                                                                                                                                    >  2:71189/3‑149 (MQ=255)     ccGGTAATCCTCGAGCATTTCCAGCACCTGCTGCGAGTTGCCGATCTCCACCGCCACTTCAACCTGCGGCAGGCGTTCGCGATAGATCTTGACCAGGTCGAGAATGTAGTAAGGCGCAGTGGCAGCAATGCGCAG‑GCTGCC‑CTGGgcct                                                                                                                                                >  3:339512‑M2/1‑145 (MQ=255)       ggTAATCCTCGAGCATTTCCAGCACCTGCTGCGAGTTGCCGATCTCCACCGCCACTTCAACCTGCGGCAGGCGTTCGCGATAGATCTTGACCAGGTCGAGAATGTAGTAAGGCGCAGTGGCAGCAATGAGCAG‑GCTGCC‑CTGGGCCTgg                                                                                                                                              >  1:362570/1‑149 (MQ=255)        gTAATCCTCGAGCATTTCCAGCACCTGCTGCGAGTTGCCGATCTCCACCGCCACTTCAACCTGCGGCAGGCGTTCGCGATAGATCTTGACCAGGTCGAGAATGTAGTAAGGCGCAGTGGCAGCAATGCGCAG‑GCTGCC‑CTGGGCCTGGc                                                                                                                                             >  1:202676/1‑149 (MQ=255)        gTAATCCTCGAGCATTTCCAGCACCTGCTGCGAGTTGCAGATCTCCACCGCCACTTCAACCTGCGGCAGGCGTTCGCGATAGATCTTGACAAGGTCGAGAATGTAGTAATGCGCAGTGGCAGCAATGCGCAG‑TCTGCC‑CTGGGACTGGc                                                                                                                                             >  2:233053/1‑149 (MQ=255)           aTCCTCGAGCATTTCCAGCACCTGCTGCGAGTTGCCGATCTCCACCGCCACTTCAACCTGCGGCAGGCGTTCGCGATAGATCTTGACCAGGTCGAGAATGTAGTAAGGCCCAG‑GGCAGCC‑TGCGCATTGCTGCCACTGCgccttactac                                                                                                                                          >  5:152916‑M2/1‑139 (MQ=255)               tCGAGCATTTCCAGCACCTGCTGCGAGTTGCCGATCTCCACCGCCACTTCAACCTGCGGCAGGCGTTCGCGATAGATCTTGACCAGGTCGAGAATGTAGTAAGGCGCAGTGGCAGCAATGCGCAG‑GCTGCC‑CTGGgc                                                                                                                                                  <  4:296934‑M2/137‑3 (MQ=255)               tCGAGCATTTCCAGCACCTGCTGCGAGTTGCCGATCTCCACCGCCACTTCAACCTGCGGCAGGCGTTCGCGATAGATCTTGACCAGGTCGAGAATGTAGTAAGGCGCAGTGGCAGCAATGCGCAG‑GCTGCC‑CTGGgc                                                                                                                                                  >  3:296934‑M2/1‑135 (MQ=255)                  aGCATTTCCAGCACCTGCTGCGAGTTGCCGATCTCCACCGCCACTTCAACCTGCGGCAGGCGTTCGCGATAGATCTTGACCAGGTCGAGAATGTAGTAAGGCGCAGTGGCAGCAATGCGCAG‑GCTGCC‑CTGGGCCTGGCCACTGTTgcg                                                                                                                                   >  4:356949/1‑149 (MQ=255)                      tttCCAGCACCTGCTGCGAGTTGCCGATCTCCACCGCCACTTCAACCTGCGGCAGGCGTTCGCGATAGATCTTGACCAGGTCGAGAATGTAGTAAGGCGCAGTGGCAGCAATGCGCAG‑GCTGCC‑CTGGGCCTGGCCACTGTTGCGCAGc                                                                                                                               >  6:66585/1‑149 (MQ=255)                       ttCCAGCACCTGCTGCGAGTTGCCGATCTCCACCGCCACTTCAACCTGCGGCAGGCGTTCGCGATAGATCTTGACCAGGTCGAGAATGTAGTAAGGCGCAGTGGCAGCAATGCGCAG‑GCTGCC‑CTGGGCCTGGCCACTGTTGCGCAGCt                                                                                                                              >  6:88252/1‑149 (MQ=255)                          cAGCACCTGCTGCGAGTTGCCGATCTCCACCGCCACTTCAACCTGCGGCAGGCGTTCGCGATAGATCTTGACCAGGTCGAGAATGTAGTAAGGCGCAGTGGCAGCAATGCGCAG‑GCTGCC‑CTGGGCCTGGCCACTGTTg                                                                                                                                     >  1:149797/1‑139 (MQ=255)                          cAGCACCTGCTGCGAGTTGCCGATCTCCACCGCCACTTCAACCTGCGGCAGGCGTTCGCGATAGATCTTGACCAGGTCGAGAATGTAGTAAGGCGCAGTGGCAGCAATGCGCAG‑GCTGCC‑CTGGGCCTGGCCACTGTTg                                                                                                                                     <  2:149797/139‑1 (MQ=255)                          cAGCACCTGCTGCGAGTTGCCGATCTCCACCGCCACTTCAACCTGCGGCAGGCGTTCGCGATAGATCTTGACCAGGTCGAGAATGTAGTAAGGCGCAGTGGCAGCAATGCGCAG‑GCTGCC‑CTGGGCCTGGCCACTGTTGCGCAGCTCg                                                                                                                            <  3:356949/148‑1 (MQ=255)                             cACCTGCTGCGAGTTGCCGATCTCCACCGCCACTTCAACCTGCGGCAGGCGTTCGCGATAGATCTTGACCAGGTCGAGAATGTAGTAAGGCGCAGTGGCAGCAATGCGCAG‑GCTGCC‑CTGGGCCTGGCCACTGTTGCGCAGCTCGAACt                                                                                                                        >  4:86852/1‑149 (MQ=255)                              aCCTGCTGCGAGTTGCCGATCTCCACCGCCACTTCAACCTGCGGCAGGCGTTCGCGATAGATCTTGACCAGGTCGAGAATGTAGTAAGGCGCAGTGGCAGCAATGCGCAG‑GCTGCC‑CTGGGCCTGGCCACTGTTGCGCAGCTCGAACTc                                                                                                                       >  8:234089/1‑149 (MQ=255)                               ccTGCTGCGAGTTGCCGATCTCCACCGCCACTTCAACCTGCGGCAGGCGTTCGCGATAGATCTTGACCAGGTCGAGAATGTAGTAAGGCGCAGTGGCAGCAATGCGCAG‑GCTGCC‑CTGGGCCTGGCCACTGTTGCGCAGCTCGAACTCg                                                                                                                      <  8:265099/149‑1 (MQ=255)                                ctgctgCGAGTTGCCGATCTCCACCGCCACTTCAACCTGCGGCAGGCGTTCGCGATAGATCTTGACCAGGTCGAGAATGTAGTAAGGCGCAGTGGCAGCAATGCGCAG‑GCTGCC‑CTGGGCCTGGCCACTGTTGCGCAGCTCGAACTCGa                                                                                                                     >  3:283343/1‑149 (MQ=255)                                   ctgcGAGTTGCCGATCTCCACCGCCACTTCAACCTGCGGCAGGCGTTCGCGATAGATCTTGACCAGGTCGAGAATGTAGTAAGGCGCAGTGGCAGCAATGCGCAG‑GCTGCC‑CTGGGCCTGGCCACTGTTGCGCAGCTCGAACTCGAt                                                                                                                    <  2:5478/147‑1 (MQ=255)                                     gcGAGTTGCCGATCTCCACCGCCACTTCAACCTGCGGCAGGCGTTCGCGATAGATCTTGACCAGGTCGAGAATGTAGTAAGGCGCAGTGGCAGCAATGCGCAG‑GCTGCC‑CTGGGCCTGGCCACTGTTGCGCAGCTCGAACTCGATGTCg                                                                                                                >  7:198338/1‑149 (MQ=255)                                          ttGCCGATCTCCACCGCCACTTCAACCTGCGGCAGGCGTTCGCTATAGATCTTGACGAGGTCGAGAATGTAGTAAGGCGCAGTGGCAGCAATGCGAAG‑GCTGCC‑CTGGGCCTGGCCACTGTTGCGCAGCTCGAACTCGATGTCGGCTTc                                                                                                           <  1:71189/149‑1 (MQ=255)                                          ttGCCGATCTCCACCGCCACTTCAACCTGCGGCAGGCGTTCGCGATAGATCTTGACCAGGTCGAGAATGTAGTAAGGCGCAGTGGCAGCAATGCGCAG‑GCTGCC‑CTGGGCCTGGCCACTGTTGCGCAGCTCGAACTCGATGTCGGCTTc                                                                                                           <  2:202676/149‑1 (MQ=255)                                          ttGCCGATCTCCACCGCCACTTCAACCTGCGGCAGGCGTTCGCGATAGATCTTGACCAGGTCGAGAATGTAGTAAGGCGCAGTGGCAGCAATGCGCAG‑GCTGCC‑CTGGGCCTGGCCACTGTTGCGCAGCTCGAACTCGATGTCGGCTTc                                                                                                           >  4:240209/1‑149 (MQ=255)                                            gCCGATCTCCACCGCCACTTCAACCTGCGGCAGGCGTTCGCGATAGATCTTGACCAGGTCGAGAATGTAGTAAGGCGCAGTGGCAGCAATGCGCAG‑GCTGCC‑CTGGGCCTGGCCACTGTTGCGCAGCTCGAACTCGATGTCGGCTTCct                                                                                                         >  1:291746/1‑149 (MQ=255)                                                     cACCGCCACTTCAACCTGCGGCAGGCGTTCGCGATAGATCTTGACCAGGTCGAGAATGTAGTAAGGCGCAGTGGCAGCAATGCGCAG‑GCTGCC‑CTGGGCCTGGCCACTGTTGCGCAGCTCGAACTCGATGTCGGCTTCCTGCTgcag                                                                                                  <  5:88252/147‑1 (MQ=255)                                                      aCCGCCACTGCCACCTGCGGCAGGCGTTCGCGAGAGATCTTGACCAGGGAGAGAATGTAGTAAGGCGCAGTGTCAGCAATGCGCAG‑GCTGCC‑CTGGGCCTGGCCACTGTTGCGCAGCTCGAACTCGATGTCGGCTTCCTGCTGcagcag                                                                                               <  1:233053/149‑1 (MQ=255)                                                        cGCCACTTCAACCTGCGGCAGGCGTTCGCGATAGATCTTGACCAGGTCGAGAATGTAGTAAGGCGCAGTGGCAGCAATGCGCAG‑GCTGCC‑CTTGGCCTGGCCACTGTTGCGCAGCTCGAACTCGATGTCTTCTTCCTGCTTCAGCAgcg                                                                                             <  4:152753/149‑1 (MQ=255)                                                              ttCAACCTGCGGCAGGCGTTCGCGATAGATCTTGACCAGGTCGAGAATGTAGTAAGGCGCAGTGGCAGCAATGCGCAG‑GCTGCC‑CTGGGCCTGGCCACTGTTGCGCAGCTCGAACTCGATGTCGGCTTCCTGCTGCAGCAGCGCCTTGa                                                                                       >  5:228236/1‑149 (MQ=255)                                                                 aaCCTGCGGCAGGCGTTCGCGATAGATCTTGACCAGGTCGAGAATGTAGTAAGGCGCAGTGGCAGCAATGCGCAG‑GCTGCC‑CTGGGCCTGGCCACTGTTGCGCAGCTCGAACTCGATGTCGGCTTCCTGCTGCAGCAGCGCCTTGACCa                                                                                    >  8:196195/1‑149 (MQ=255)                                                                   ccTGCGGCAGGCGTTCGCGATAGATCTTGACCAGGTCGAGAATGTAGTAAGGCGCAGTGGCAGCAATGCGCAG‑GCTGCC‑CTGGGCCTGGCCACTGTTGCGCAGCTCGAACTCGATGTCGGCTTCCTGCTGCAGCAGCGCCTTGACCATc                                                                                  <  6:228236/149‑1 (MQ=255)                                                                     tGCGGCAGGCGTTCGCGATAGATCTTGACCAGGTCGAGAATGTAGTAAGGCGCAGTGGCAGCAATGCGCAG‑GCTGCC‑CTGGGCCTGGCCACTGTTGCGCAGCTCGAACTCGATGTCGGCTTCCTGCTGCAGCAGCGCCTTGACCATCgg                                                                                >  6:63905/1‑149 (MQ=255)                                                                          cAGGCGTTCGCGATAGATCTTGACCAGGTCGAGAATGTAGTAAGGCGCAGTGGCAGCAATGCGCAG‑GCTGCC‑CTGGGCCTGGCCACTGTTGCGCAGCTCGAACTCGATGTCGGCTTCCTGCTGCAGCAGCGCCtt                                                                                         >  2:51459/1‑135 (MQ=255)                                                                          cAGGCGTTCGCGATAGATCTTGACCAGGTCGAGAATGTAGTAAGGCGCAGTGGCAGCAATGCGCAG‑GCTGCC‑CTGGGCCTGGCCACTGTTGCGCAGCTCGAACTCGATGTCGGCTTCCTGCTGCAGCAGCGCCtt                                                                                         <  1:51459/135‑1 (MQ=255)                                                                          cAGGCGTTCGCGATAGATCTTGACCAGGTCGAGAATGTAGTAAGGCGCAGTGGCAGCAATGCGCAG‑GCTGCC‑CTGGGCCTGGCCACTGTTGCGCAGCTCGAACTCGATGTCGGCTTCCTGCTGCAGCAGCGCCTTGACCATCGgcagca                                                                           <  3:86852/149‑1 (MQ=255)                                                                          cAGGCGTTCGCGATAGATCTTGACCAGGTCGAGAATGTAGTAAGGCGCAGTGGCAGCAATGCGCAG‑GCTGCC‑ATGGGCCTGGCCACTGTTGCGCAGCTCGAACTCGATGTCGGCTTCCTGCTGCAGCAGCGCCTTGACCATCGgcagca                                                                           <  4:283343/149‑1 (MQ=255)                                                                             gCGTTCGCGATAGATCTTGACCAGGTCGAGAATGTAGTAAGGCGCAGTGGCAGCAATGCGCAG‑GCTGCC‑CTGGGCCTGGCCACTGTTGCGCAGCTCGAACTCGATGTCGGCTTCCTGCTGCAGCAGCGCCTTGACCATCGGCAGCAGGc                                                                        <  6:168971/149‑1 (MQ=255)                                                                                     gATAGATCTTGACCAGGTCGAGAATGTAGTAAGGCGCAGTGGCAGCAATGCGCAG‑GCTGCC‑CTGGGCCTGGCCACTGTTGCGCAGCTCGAACTCGATGTCGGCTTCCTGCTGCAGCAGCGCCTTGACCATCGGCAGCAGGCGTAAGccc                                                                >  7:17356/1‑149 (MQ=255)                                                                                     gATAGATCTTGACCAGGTCGAGAATGTAGTAAGGCGCAGTGGCAGCAATGCGCAG‑GCTGCC‑CTGGGCCTGGCCACTGTTGCGCAGCTCGAACTCGATGTCGGCTTCCTGCTGCAGCAGCGCCTTGACCATCGGACGCAGGCGTAAGcc                                                                 >  4:257563/1‑148 (MQ=255)                                                                                       tAGATCTTGACCAGGTCGAGAATGTAGTAAGGCGCAGTGGCAGCAATGCGCAG‑GCTGCC‑CTGGGCCTGGCCACTGTTGCGCAGCTCGAACTCGATGTCGGCTTCCTGCTGCAGCAGCGCCTTGACCATCGGcagcag                                                                          <  3:63090/137‑1 (MQ=255)                                                                                       tAGATCTTGACCAGGTCGAGAATGTAGTAAGGCGCAGTGGCAGCAATGCGCAG‑GCTGCC‑CTGGGCCTGGCCACTGTTGCGCAGCTCGAACTCGATGTCGGCTTCCTGCTGCAGCAGCGCCTTGACCATCGGcagcag                                                                          >  4:63090/1‑137 (MQ=255)                                                                                               gACCAGGTCGAGAATGTAGTAAGGCGCAGTGGCAGCAATGCGCAG‑GCTGCC‑CTGGGCCTGGCCACTGTTGCGCAGCTCGAACTCGATGTCGGCTTCCTGCTGCAGCAGCGCCTTGACCATCGGCAGCAGGCGTAAGCCCTCCTCGCTc                                                       >  7:307009/1‑148 (MQ=255)                                                                                                    ggTCGAGAATGTAGTAAGGCGCAGTGGCAGCAATGCGCAG‑GCTGCC‑CTGGGCCTGGCCACTGTTGCGCAGCTCGAACTCGATGTCGGCTTCCTGCTGCAGCAGCGCCTTGACAATAGTTATAATGCGTAAGACCTCCTCGCTCAACAcc                                                 <  2:362570/149‑1 (MQ=255)                                                                                                      tCGAGAATGTAGTAAGGCGCAGTGGCAGCAATGCGCAG‑GCTGCC‑CTGGGCCTGGCCACTGTTGCGCAGCTCGAACTCGATGTCGGCTTCCTGCTGCAGCAGCGCCTTGACCATCGGCAGCAGGCGTAAGccc                                                                <  1:16677/132‑1 (MQ=255)                                                                                                      tCGAGAATGTAGTAAGGCGCAGTGGCAGCAATGCGCAG‑GCTGCC‑CTGGGCCTGGCCACTGTTGCGCAGCTCGAACTCGATGTCGGCTTCCTGCTGCAGCAGCGCCTTGACCATCGGCAGCAGGCGTAAGccc                                                                >  2:16677/1‑132 (MQ=255)                                                                                                        gagaATGTAGTAAGGCGCAGTGGCAGCAATGCGCAG‑GCTGCC‑CTGGGCCTGGCCACTGTTGCGCAGCTCGAACTCGATGTCGGCTTCCTGCTGCAGCAGCGCCTTGACCATCGGCAGCAGGCGTAAGCCCTCCTCGCTc                                                       >  1:277823/1‑139 (MQ=255)                                                                                                        gagaATGTAGTAAGGCGCAGTGGCAGCAATGCGCAG‑GCTGCC‑CTGGGCCTGGCCACTGTTGCGCAGCTCGAACTCGATGTCGGCTTCCTGCTGCAGCAGCGCCTTGACCATCGGCAGCAGGCGTAAGCCCTCCTCGCTc                                                       <  2:277823/139‑1 (MQ=255)                                                                                                        gagaATGTAGTAAGGCGCAGTGGCAGCAATGCGCAG‑GCTGCC‑CTGGGCCTGGCCACTGTTGCGCAGCTCGAACTCGATGTCGGCTTCCTGCTGCAGCAGCGCCTTGACCATCGGCAGCAGGCGTAAGCCCTCCTCGCTCAACACCAGgc                                             >  1:21858/1‑149 (MQ=255)                                                                                                        gagaATGTAGTAAGGCGCAGTGGCAGCAATGCGCAG‑GCTGCC‑CTGGGCCTGGCCACTGTTGCGCAGCTCGAAATCGATGTCGGCTTCCTGCTGCAGCAGCGCCTTGACCAGCGGCAGCAGGCGTAAGCCCTCCTCGCTCAACCCCAGgc                                             >  5:209166/1‑149 (MQ=255)                                                                                                         agaATGTAGTAAGGCGCAGTGGCAGCAATGCGCAG‑GCTGCC‑CTGGGCCTGGCCACTGTTGCGCAGCTCGAACTCGATGTCGGCTTCCTGCTGCAGCAGCGCCTTGACCATCGGCAGCAGGCGTAAGCCCTCCTCGCTCAACACCAGgcg                                            <  3:240209/149‑1 (MQ=255)                                                                                                          gaATGTAGTAAGGCGCAGTGGCAGCAATGCGCAG‑GCTGCC‑CTGGGCCTGGCCACTGTTGCGCAGCTCGAACTCGATGTCGGCTTCCTGCTGCAGCAGCGCCTTGACCATCGGCAGCAGGCGTAAGCCCTCCTCGCTCAACACCAGgcgc                                           >  1:263624/1‑149 (MQ=255)                                                                                                               tagtaAGGCGCAGTGGCAGCAATGCGCAG‑GCTGCC‑CTGGGCCTGGCCACTGTTGCGCAGCTCGAACTCGATGTCGGCTTCCTGCTGCAGCAGCGCCTTGACCATCGGCAGCAGGCGTAAGCCCTCCTCGCTCAACACCAGGCGccgccc                                      >  7:322997/1‑149 (MQ=255)                                                                                                                 gtaAGGCGCAGTGGCAGCAATGCGCAG‑GCTGCC‑CTGGGCCTGGCCACTGTTGCGCAGCTCGAACTCGATGTCGGCTTCCTGCTGCAGCAGCGCCTTGACCATCGGCATCAGGCGTAAGCCCTCCTCGCTCAACACCAGGCGccgcccg                                     <  2:263624/148‑1 (MQ=255)                                                                                                                    aGGCGCAGTGGCAGCAATGCGCAG‑GCTGCC‑CTGGGCCTGGCCACTGTTGCGCAGCTCGAACTCGATGTCGGCTTCCTGCTGCAGCAGCGCCTTGACCATCGGCAGCAGGCGTAAGCCCTCCTCGCTCAACACCAGGCGCCGCCcgccgc                                 >  2:266008/1‑149 (MQ=255)                                                                                                                     ggCGCAGTGGCAGCAATGCGCAG‑GCTGCC‑CTGGGCCTGGCCACTGTTGCGCAGCTCGAACTCGATGTCGGCTTCCTGCTGCAGCAGCGCCTTGACCATCGGCAGCAGGCGTAAGCCCTCCTCGCTCAACACCAGGCGCCGCCCGCcgcg                                <  5:66585/149‑1 (MQ=255)                                                                                                                      gcgcAGTGGCAGCAATGCGCAG‑GCTGCC‑CTGGgccttactacattctcgacctggtcaagatctatcgcgaacgcctgccgcaggttgaagtggcggtggagatcggcaactcgcagcaggtgctggaaatgctcgaggattaccgggt                               <  1:341074‑M2/149‑118 (MQ=255)                                                                                                                      gcgcAGTGGCAGCAATGCGCAG‑GCTGCC‑CTGGgccttactacattctcgacctggtcaagatctatcgcgaacgcctgccgcaggttgaagtggcggtggagatcg                                                                          >  8:74131‑M2/1‑32 (MQ=255)                                                                                                                      gcgcAGTGGCAGCAATGCGCAG‑GCTGCC‑CTGGgccttactacattctcgacctggtcaagatctatcgcgaacgcctgccgcaggttgaagtggcggtggagatcg                                                                          <  7:74131‑M2/106‑75 (MQ=255)                                                                                                                      gcgcAGTGGCAGCAATGCGCAG‑GCTGCC‑CTGGGCCTGGCCACTGTTGCGCAGCTCGAACTCGATGTCGGCTTCCTGCTGCAGCAGTGCCTTGACCATCGGCAGCAGGCGTAAGCCCTCCTCGCTCAACACCAGGCGCCGCCCGCCGCgg                               <  7:234089/149‑1 (MQ=255)                                                                                                                       cgcAGTGGCAGCAATGCGCAG‑GCTGCC‑CTGGgccttactacattctcgacctggtcaagatctatcgcgaacgcctgccgcaggttgaagtggcggtggagatcggcaactcgcagcaggtgctggaaatgctcgaggattaccgggtg                              >  2:341074‑M2/1‑31 (MQ=255)                                                                                                                       cgcAGTGGCAGCAATGCGCAG‑GCTGCC‑CTGGGCCTGGCCACTGTTGCGCAGCTCGAACTCGATGTCGGCTTCCTGCTGCAGCAGCGCCTTGACCATCGGCAGCAGGCGTAAGCCCTCCTCGCTCAACACCAGGCGCCGCCCGCCGCgg                               >  2:268953/1‑148 (MQ=255)                                                                                                                       cgcAGTGGCAGCAATGCGCAG‑GCTGCC‑CTGGGCCTGGCCACTGTTGCGCAGCTCGAACTCGATGTCGGCTTCCTGCTGCAGCAGCGCCTTGACCATCGGCAGCAGGCGTAAGCCCTCCTCGCTCAACACCAGGCGCCGCCCGCCGCGGt                              <  2:291746/149‑1 (MQ=255)                                                                                                                             ggCAGCAATGCGCAG‑GCTGCC‑CTGGGCCTGGCCACTGTTGCGCAGCTCGAACTCGATGTCGGCTTCctgct                                                                                                      <  3:333783/71‑1 (MQ=255)                                                                                                                             ggCAGCAATGCGCAG‑GCTGCC‑CTGGGCCTGGCCACTGTTGCGCAGCTCGAACTCGATGTCGGCTTCctgct                                                                                                      >  4:333783/1‑71 (MQ=255)                                                                                                                             ggCAGCAATGCGCAG‑GCTGCC‑CTGGGCCTGGCCACTGTTGCGCAGCTCGAACTCGATGTCGGCTTCCTGCTGCAGCAGCGCCTTGACCATc                                                                                  <  7:247741/91‑1 (MQ=255)                                                                                                                             ggCAGCAATGCGCAG‑GCTGCC‑CTGGGCCTGGCCACTGTTGCGCAGCTCGAACTCGATGTCGGCTTCCTGCTGCAGCAGCGCCTTGACCATc                                                                                  >  8:247741/1‑91 (MQ=255)                                                                                                                                agcaATGCGCAG‑GCTGCC‑CTGGGCCTGGCCACTGTTGCGCAGCTCGAACTCGATGTCGGCTTCCTGCTGCAGCAGCGCCTTGACCATCGGcagcag                                                                          >  6:236598/1‑96 (MQ=255)                                                                                                                                agcaATGCGCAG‑GCTGCC‑CTGGGCCTGGCCACTGTTGCGCAGCTCGAACTCGATGTCGGCTTCCTGCTGCAGCAGCGCCTTGACCATCGGcagcag                                                                          <  5:236598/96‑1 (MQ=255)                                                                                                                                  caATGCGCAG‑GCTGCC‑CTGGGCCTGGCCACTGTTGCGCAGCTCGAACTCGATGTCGGCTTCCTGCTGCAGCAGCGCCTTGACCATCGGCAGCAGGCGTAAGCCCTCCTCGCTCAACACCAGGCGCCGCCCGCCGCGGTAGAACAGCTcc                   <  8:307009/149‑1 (MQ=255)                                                                                                                                             gCTGCC‑CTGGGCCTGGCCACTGTTGCGCAGCTCGAACTCGATGTCGGCTTCCTGCTGCAGCAGCGCCTTGACCATCGGCAGCAGGCGTAAGCCCTCCTCGCTCAACACCAGGCGCCGCCCGCCGCGGTAGAACAGCTCCACGGCGTACt         >  1:363030/1‑149 (MQ=255)                                                                                                                                              cTGCC‑CTGGGCCTGGCCACTGTTGCGCAGCTCGAACTCGATGTCGGCTTCCTGCTGCAGCAGCTCCTTTATTTTTTTTATTTTTAGTTAGACCTCCTAGATCTACACCAGGCGCCGCCCGCCGCGGTAGAACAGCTCCACGGCGTACTg        <  8:198338/149‑1 (MQ=255)                                                                                                                                              cTGCC‑CTGGGCCTGGCCACTGTTGCGCAGCTCGAACTCGATGTCGGCTTCCTGCTGCAGCAGCGCCTTGACCATCGGCAGCAGGCGTAAGCCCTCCTCGCTCAACACCAGGCGCCGCCCGCCGCGGTAGAACAGCTCCACGGCGTACTg        <  7:196195/149‑1 (MQ=255)                                                                                                                                                       ggCCTGGCCACTGTTGCGCAGCTCGAACTCGATGTCGGCTTCCTGCTGCAGCAGCGCCTTGACCATCGGCAGCAGGCGTAAGCCCTCCTCGCTCAACACCAGGCGCCGCCCGCCGCGGTAGAACAGCTCCACGGCGTACTGGCCTTc  <  2:363030/147‑1 (MQ=255)                                                                                                                                                       |                                                                                                                                                   CCACCCGGTAATCCTCGAGCATTTCCAGCACCTGCTGCGAGTTGCCGATCTCCACCGCCACTTCAACCTGCGGCAGGCGTTCGCGATAGATCTTGACCAGGTCGAGAATGTAGTAAGGCGCAGTGGCAGCAATGCGCAG‑GCTGCC‑CTGGGCCTGGCCACTGTTGCGCAGCTCGAACTCGATGTCGGCTTCCTGCTGCAGCAGCGCCTTGACCATCGGCAGCAGGCGTAAGCCCTCCTCGCTCAACACCAGGCGCCGCCCGCCGCGGTAGAACAGCTCCACGGCGTACTGGCCTTC  >  NC_002947/5863477‑5863771

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.