New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1221777	59 (1.040)	8 (0.150)	7/248	NT	11.9%	coding (1433/1908 nt)	PP_1067	sensor histidine kinase
	?	NC_002947	= 1221820	62 (1.150)					coding (1390/1908 nt)	PP_1067	sensor histidine kinase

GCTGGTCCTCGAACTGGTGGTGCAATTGCAAATGACAGGCACTGATGCGGTTGGCCAGCACCTGCAGGGTGGCCTCTACTGCCTTGGCCAGTGAAGCCTGGCCGCTGTCATCGCCGCGCCGGGCGAACGAGCGAAGGCTGGCGGTGATGCGGCCCATGCGGTCGATCAGGTCATTCATGGTGCGCAGGTTGGTGCTGGC‑GGTTTCCAGCGCCCCGCGCTCGAGGAAGCGCACTGTATTGCCAGAAAGGGTGCGCAGCGCAGCCAGTGGCTGGTTCAGCTCGTGGGCAATGCTGGTG  >  NC_002947/1221673‑1221968                                                                                                                                                    |                                                                                                                                                      gCTGGTCCTCGAACTGGTGGTGCAATTGCAAATGACAGGCACTGATGCGGTTGGCCAGCACCTGCAGGGTGGCCTCTACTGCCTTGGCCAGTGAAGCCTGGCCGCTGTCATCGCCGCGCCGGGCGAACGAGCGAAGGCTGGCGGTGATg                                                                                                                                                      <  4:114753‑M2/149‑2 (MQ=255)  cTGGGCCTCGAACTGGTGGTGCAATTGCAAATGACAGGCACTGATGCGGTTGGCCAGCACCTGCAGGGTGGCCTCTACTGCCTTGGCCAGTGAAGCCTGGCCGCTGTCATCGCCGCGCCGGGCGAACGAGCGAAGGCTGGCGGTGATgc                                                                                                                                                     >  6:332212‑M2/1‑147 (MQ=255)     gTCCTCGAACTGGTGGTGCAATTGCAAATGACAGGCACTGATGCGGTTGGCCAGCACCTGCAGGGTGGCCTCTACTGCCTTGGCCAGTGAAGCCTGGCCGCTGTCATCGCCGCGCCGGGCGAACGAGCGAAGGCTGGCGGTGATgcggc                                                                                                                                                  >  5:18854‑M2/1‑144 (MQ=255)       ccTCGAACTGGTGGTGCAATTGCAAATGACAGGCACTGATGCGGTTGGCCAGCACCTGCAGGGTGGCCTCTACTGCCTTGGCCAGTGAAGCCTGGCCGCTGTCATCGCCGCGCCGGGCGAACGAGCGAAGGCTGGCGGTGATGCGGccc                                                                                                                                                <  3:226655/149‑1 (MQ=255)        cTCGAACTGGTGGTGCAATTGCAAATGACAGGCACTGATGCGGTTGGCCAGCACCTGCAGGGTGGCCTCTACTGCCTTGGCCAGTGAAGCCTGGCCGCTGTCATCGCCGCGCCGGGCGAACGAGCGAAGGCTGGCGGTGATGCGGCCCa                                                                                                                                               >  1:24541/1‑149 (MQ=255)        cTCGAACTGGTGGTGCAATTGCAAATGACAGGCACTGATGCGGTTGGCCAGCACCTGCAGGGTGGCCTCTACTGCCTTGGCCAGTGAAGCCTGGCCGCTGTCATCGCCGCGCCGGGCGAACGAGCGAAGGCTGGCGGTGATGCGGCCCa                                                                                                                                               >  1:94232/1‑149 (MQ=255)        cTCGAACTGGTGGTGCAATTGCAAATGACAGGCACTGATGCGGTTGGCCAGCACCTGCAGGGTGGCCTCTACTGCCTTGGCCAGTGAAGCCTGGCCGCTGTCATCGCCGCGCCGGGCGAACGAGCGAAGGCTGGCGGTGATGCGGCCCa                                                                                                                                               >  4:208413/1‑149 (MQ=255)        cTCGAACTGGTGGTGCAATTGCAAATGACAGGCACTGATGCGGTTGGCCAGCACCTGCAGGGTGGCCTCTACTGCCTTGGCCAGTGAAGCCTGGCCGCTGTCATCGCCGCGCCGGGCGAACGAGCGAAGGCTGGCGGTGATGCGGCCCa                                                                                                                                               <  5:151876/149‑1 (MQ=255)           gAACTGGTGGTGCAATTGCAAATGACAGGCACTGATGCGGTTGGCCAGCACCTGCAGGGTGGCCTCTACTGCCTTGGCCAGTGAAGCCTGGCCGCTGTCATCGCCGCGCCGGGCGAACGAGCGAAGGCTGGCGGTGATGCGGCCCATg                                                                                                                                             <  3:42969/148‑1 (MQ=255)           gAACTGGTGGTGCAATTGCAAATGACAGGCACTGATGCGGTTGGCCAGCACCTGCAGGGTGGCCTCTACTGCCTTGGCCAGTGAAGCCTGGCCGCTGTCATCGCCGCGCCGGGCGAACGAGCGAAGGCTGGCGGTGATGCGGCCCATg                                                                                                                                             <  3:114753/148‑1 (MQ=255)                    gtgCAATTGCAAATGACAGGCACTGATGCGGTTGGCCAGCACCTGCAGGGTGGCCTCTACTGCCTTGGCCAGTGAAGCCTGGCCGCTGTCATCGCCGCGCCGGGCGAACGAGCGAAGGCTGGCGGTGATGCGGCCCATGCGGTCGAt                                                                                                                                     >  2:224895/1‑147 (MQ=255)                       cAATTGCAAATGACAGGCACTGATGCGGTTGGCCAGCACCTGCAGGGTGGCCTCTACTGCCTTGGCCAGTGAAGCCTGGCCGCTGTCATCGCCGCGCCGGGCGAACGAGCGAAGGCTGGCGGTGATGCGGCCCATGCGGTCGATCAgg                                                                                                                                 <  4:132416/148‑1 (MQ=255)                         aTTGCAAATGACAGGCACTGATGCGGTTGGCCAGCACCTGCAGGGTGGCCTCTACTGCCTTGGCCAGTGAAGCCTGGCCGCTGTCATCGCCGCGCCGGGCGAACGAGCGAAGGCTGGCGGTGATGCGGCCCATGCGGTCGATCAGGtca                                                                                                                              <  4:306557/149‑1 (MQ=255)                             cAAATGACAGGCACTGATGCGGTTGGCCAGCACCTGCAGGGTGGCCTCTACTGCCTTGGCCAGTGAAGCCTGGCCGCTGTCATCGCCGCGCCGGGCGAACGAGCGAAGGCTGGCGGTGATGCGGCCCATGCGGTCGATCAGGtcattc                                                                                                                           <  1:224895/148‑1 (MQ=255)                               aaTGACAGGCACTGATGCGGTTGGCCAGCACCTGCAGGGTGGCCTCTACTGCCTTGGCCAGTGAAGCCTGGCCGCTGTCATCGCCGCGCCGGGCGAACGAGCGAAGGCTGGCGGTGATGCGGCCCATGCGGTCGATCAGGTCATTCATg                                                                                                                        <  3:305394/149‑1 (MQ=255)                               aaTGACAGGCACTGATGCGGTTGGCCAGCACCTGCAGGGTGGCCTCTACTGCCTTGGCCAGTGAAGCCTGGCCGCTGTCATCGCCGCGCCGGGCGAACGAGCGAAGGCTGGCGGTGATGCGGCCCATGCGGTCGATCAGGTCATTCATg                                                                                                                        <  2:64345/149‑1 (MQ=255)                                 tGACAGGCACTGATGCGGTTGGCCAGCACCTGCAGGGTGGCCTCTACTGCCTTGGCCAGTGAAGCCTGGCCGCTGTCATCGCCGCGCCGGGCGAACGAGCGAAGGCTGGCGGTGATGCGGCCCATGCGGTCGATCAGGTCATTCATGGt                                                                                                                      <  2:94232/149‑1 (MQ=255)                                 tGACAGGCACTGATGCGGTTGGCCAGCACCTGCAGGGTGGCCTCTACTGCCTTGGCCAGTGAAGCCTGGCCGCTGTCATCGCCGCGCCGGGCGAACGAGCGAAGGCTGGCGGTGATGCGGCCCATGCGGTCGATCAGGTCATTCATGGt                                                                                                                      >  2:189832/1‑149 (MQ=255)                                       gCACTGATGCGGTTGGCCAGCACCTGCAGGGTGGCCTCTACTGCCTTGGCCAGTGAAGCCTGGCCGCTGTCATCGCCGCGCCGGGCGAACGAGCGAAGGCTGGCGGTGATGCGGCCCATGCGGTCGATCAGGTCATTCATGGTGCGCAg                                                                                                                >  5:255675/1‑149 (MQ=255)                                       gCACTGATGCGGTTGGCCAGCACCTGCAGGGTCGCCTCTACTGCCTTGGCCAGTGAAGCCTGGCCGCTGTCATCGCCGCGCGGGGCGAACGAGCGAAGGATCGCGGTGATGCGGCCCATGCGGTCGATCAGGTCATTCATCGTGCGCac                                                                                                                >  4:334588/1‑148 (MQ=255)                                           tGATGCGGTTGGCCAGCACCTGCAGGGTGGCCTCTACTGCCTTGGCCAGTGAAGCCTGGCCGCTGTCATCGCCGCGCCGGGCGAACGAGCGAAGGCTGGCGGTGATGCGGCCCATGCGGTCGATCAGGTCATTCATGGTGCGCAGGTTg                                                                                                            >  6:220230/1‑149 (MQ=255)                                             aTGCGGTTGGCCAGCACCTGCAGGGTGGCCTCTACTGCCTTGGCCAGTGAAGCCTGGCCGCTGTCATCGCCGCGCCGGGCGAACGAGCGAAGGCTGGCGGTGATGCGGCCCATGCGGTCGATCAGGTCATTCATGGTGCGCAGGTTg                                                                                                            <  6:255675/147‑1 (MQ=255)                                                cGGTTGGCCAGCACCTGCAGGGTGGCCTCTACTGCCTTGGCCAGTGAAGCCTGGCCGCTGTCATCGCCGCGCCGGGCGAACGAGCGAAGGCTGGCGGTGATGCGGCCCATGCGGTCGATCAGGTCATTCATGGTGCGCAGGTTGGTGCt                                                                                                       >  1:154663/1‑149 (MQ=255)                                                  gTTGGCCAGCACCTGCAGGGTGGCCTCTACTGCCTTGGCCAGTGAAGCCTGGCCGCTGTCATCGCCGCGCCGGGCGAACGAGCGAAGGCTGGCGGTGATGCGGCCCATGCGGTCGATCAGGTCATTCATGGTGCGCAGGTTGGTGCTgg                                                                                                     <  1:189832/149‑1 (MQ=255)                                                   ttGGCCAGCACCTGCAGGGTGGCCTCTACTGCCTTGGCCAGTGAAGCCTGGCCGCTGTCATCGCCGCGCCGGGCGAACGAGCGAAGGCTGGCGGTGATGCGGCCCATGCGGTCGATCAGGTCATTCATGGTGCGCAGGTTGGTGCTGGc                                                                                                    >  7:173896/1‑149 (MQ=255)                                                     ggCCAGCACCTGCAGGGTGGCCTCTACTGCCTTGGCCAGTGAAGCCTGGCCGCTGTCATCGCCGCGCCGGGCGAACGAGCGAAGGCTGGCGGTGATGCGGCCCATGCGGTCGATCAGGTCATTCATGGTGCGCAGGTTGGTGCTGGC‑gg                                                                                                 >  6:349006/1‑149 (MQ=255)                                                       ccAGCACCTGCAGGGTGGCCTCTACTGCCTTGGCCAGTGAAGCCTGGCCGCTGTCATCGCCGCGCCGGGCGAACGAGCGAAGGCTGGCGGTGATGCGGCCCATGCGGTCGATCAGGTCATTCATGGTGCGCAGGTTGGTGCTGGC‑GGtt                                                                                               >  3:37090/1‑149 (MQ=255)                                                        cAGCACCTGCAGGGTGGCCTCTACTGCCTTGGCCAGTGAAGCCTGGCCGCTGTCATCGCCGCGCCGGGCGAACGAGCGAAGGCTGGCGGTGATGCGGCCCATGCGGTCGAt                                                                                                                                     <  8:254762/111‑1 (MQ=255)                                                        cAGCACCTGCAGGGTGGCCTCTACTGCCTTGGCCAGTGAAGCCTGGCCGCTGTCATCGCCGCGCCGGGCGAACGAGCGAAGGCTGGCGGTGATGCGGCCCATGCGGTCGAt                                                                                                                                     >  7:254762/1‑111 (MQ=255)                                                         aGCACCTGCAGGGTGGCCTCTACTGCCTTGGCCAGTGAAGCCTGGCCGCTGTCATCGCCGCGCCGGGCGAACGAGCGAAGGCTGGCGGTGATGCGGCCCATGCGGTCGATCAGGTCATTCATGGTGCGCAGGTTGGTGCTGGC‑GGTTTc                                                                                             <  2:154663/149‑1 (MQ=255)                                                            aCCTGCAGGGTGGCCTCTACTGCCTTGGCCAGTGAAGCCTGGCCGCTGTCATCGCCGCGCCGGGCGAACGAGCGAAGGCTGGCGGTGATGCGGCCCATGCGGTCGATCAGGTCATTCATGGTGCGCAGGTTGGTGCTGGC‑GGTTTCCAg                                                                                          >  8:312423/1‑149 (MQ=255)                                                             ccTGCAGGTTTGCCTCTACTGCCTTGGCCAGTGAATCCTGGCCGCTGTCATCGCCGCGCCTGGCGAACGAGCGAAGGCTGGCGGTGATGCGGCCCATGCGGTCAATCAGGTCATTCATGGTGCGCAGGTGGGTGCTGGC‑GGTTTCCAgc                                                                                         <  8:95707/149‑1 (MQ=255)                                                              cTGCAGGGTGGCCTCTACTGCCTTGGCCAGTGAAGCCTGGCCGCTGTCATCGCCGCGCCGGGCGAACGAGCGAAGGCTGGCGGTGATGCGGCCCATGCGGTCGATCAGGTCATTCATGGTGCGCAGGTTGGTGCTGGC‑GGTTTCCAgcg                                                                                        >  8:322900/1‑149 (MQ=255)                                                                    ggTGGCCTCTACTGCCTTGGCCAGTGAAGCCTGGCCGCTGTCATCGCCGCGCCGGGCGAACGAGCGAAGGCTGGCGGTGATGCGGCCCTTGCGGTCGATCAGGTCATTCATGGTGCGCAGGTTGGTGCTGGC‑GGTTTCCAGCGCCCcgc                                                                                  >  8:29777/1‑149 (MQ=255)                                                                    ggTGGCCTCTACTGCCTTGGCCAGTGAAGCCTGGCCGCTGTCATCGCCGCGCCGGGCGAACGAGCGAAGGCTGGCGGTGATGCGGCCCATGCGGTCGATCAGGTCATTCATGGTGCGCAGGTTGGTGCTGGC‑GGTTTCCAGCGCCCcgc                                                                                  >  3:59155/1‑149 (MQ=255)                                                                        gCCTCTACTGCCTTGGCCAGTGAAGCCTGGCCGCTGTCATCGCCGCGCCGGGCGAACGAGCGAAGGCTGGCGGTGATGCGGCCCATGCGGTCGATCAgg                                                                                                                                 <  8:161398/99‑1 (MQ=255)                                                                        gCCTCTACTGCCTTGGCCAGTGAAGCCTGGCCGCTGTCATCGCCGCGCCGGGCGAACGAGCGAAGGCTGGCGGTGATGCGGCCCATGCGGTCGATCAgg                                                                                                                                 >  7:161398/1‑99 (MQ=255)                                                                          ctctACTGCCTTGGCCAGTGAAGCCTGGCCGCTGTCATCGCCGCGCCGGGCGAACGAGCGAAGGCTGGCGGTGATGCTGCCCATGCGGTCGATCAGGTCATTCATGGTGCGCAGGTTGGTGCTGGC‑GGTTTCCAGCGCCCCGCGCTCGa                                                                            <  3:334588/149‑1 (MQ=255)                                                                          ctctACTGCCTTGGCCAGTGAAGCCTGGCCGCTGTCATCGCCGCGCCGGGCGAACGAGCGAAGGCTGGCGGTGATGCGGCCCATGCGGTCGATCAGGTCATTCATGGTGCGCAGGTTGGTGCTGGC‑GGTTTCCAGCGCCCCGCGCTCGa                                                                            <  2:24541/149‑1 (MQ=255)                                                                               cTGCCTTGGCCAGTGAAGCCTGGCCGCTGTCATCGCCGCGCCGGGCGAACGAGCGAAGGCTGGCGGTGATGCGGCCCATGCGGTCGATCAGGTCATTCATGGTGCGCAGGTTGGTGCTGGC‑GGTTTCCAGCGCCCCGCGCTCGAGGAAg                                                                       >  8:10946/1‑149 (MQ=255)                                                                                  ccTTGGCCAGTGAAGCCTGGCCGCTGTCATCGCCGCGCCGGGCGAACGAGCGAAGGCTGGCGGTGATGCGGCCCATGCGGTCGATCAGGTCATTCATGGTGCGCAGGTTGGTGCTGGC‑GGTTTCCAGCGCCCCGCGCTCGAGGAAgcg                                                                     >  6:61409/1‑148 (MQ=255)                                                                                    ttGGCCAGTGAAGCCTGGCCGCTGTCATCGCCGCGCCGGGCGAACGAGCGAAGGCTGGCGGTGATGCGGCCCATGCGGTCGATCAGGTCATTCATGGTGCGCAGGTTGGTGCTGGC‑GGTTTCCAGCGCCCCGCGCTCGAGGAAGCGCAc                                                                  >  8:172515/1‑149 (MQ=255)                                                                                      ggCCAGTGAAGCCTGGCCGCTGTCATCGCCGCGCCGGGCGAACGAGCGAAGGCTGGCGGTGATGCGGCCCATGCGGTCGATCAGGTCATTCATGGTGCGCAGGTTGGTGCTGGC‑GGTTTCCAGCGCCCCGCGCTCGAGGAAGCGCACTg                                                                >  3:101713/1‑149 (MQ=255)                                                                                      ggCCAGTGAAGCCTGGCCGCTGTCATCGCCGCGCCGGGCGAACGAGCGAAGGCTGGCGGTGATGCGGCCCATGCGGTCGATCAGGTCATTAATGGAGCGCAGGTTGGTGCTGGC‑GGTTTCCAGCGCCCCGCGCTCGAGGAAGCGCACTg                                                                >  3:217375/1‑149 (MQ=255)                                                                                       gCCAGTGAAGCCTGGCCGCTGTCATCGCCGCGCCGGGCGAACGAGCGAAGGCTGGCGGTGATGCGGCCCATGCGGTCGATCAGGTCATTCATGGTGCGCAGGTTGGTGCTGGC‑GGTTTCCAGCGCCCCGCGCTCGAGGAAGCGCACTg                                                                >  3:195049/1‑148 (MQ=255)                                                                                       gCCAGTGAAGCCTGGCCGCTGTCATCGCCGCGCCGGGCGAACGAGCGAAGGCTGGCGGTGATGCGGCCCATGCGGTCGATCAGGTCATTCATGGTGCGCAGGTTGGTGCTGGC‑GGTTTCCAGCGCCCCGCGCTCGAGGAAGCGCACTGt                                                               <  4:101713/149‑1 (MQ=255)                                                                                          aGTGAAGCCTGGCCGCTGTCATCGCCGCGCCGGGCGAACGAGCGAAGGCTGGCGGTGATGCGGCCCATGCGGTCGATCAGGTCATTCATGGTGCGCAGGTTGGTGCTGGC‑GGTTTCCAGCGCCCCGCGCTCGAGGAAGCGCACTGTAtt                                                            <  7:312423/149‑1 (MQ=255)                                                                                             gAAGCCTGGCCGCTGTCATCGCCGCGCCGGGCGAACGAGCGAAGGCTGGCGGTGATGCGGCCCTTGCGGTCGATCAGGTCATTCATGGTGCGCAGGTTGGTGCTGGC‑GGTTTCCAGCGCCCCGCGCTCGAGGAAGCGCACTGTATTGc                                                          <  7:29777/148‑1 (MQ=255)                                                                                                gCCTGGCCGCTGTCATCGCCGCGCCGGGCGAACGAGCGAAGGCTGGCGGTGATGCGGCCCATGCGGTCGATCAGGTCATTCATGGTGCGCAGGTTGGTGCTGGC‑GGTTTCCAGCGCCCCGCGCTCGAGGAAGCGCACTGTATTGCCAg                                                       >  1:233123/1‑148 (MQ=255)                                                                                                 ccTGGCCGCTGTCATCGCCGCGCCGGGCGAACGAGCGAAGGCTGGCGGTGATgcggccaggcttcactggccaaggcagtagaggccaccctgcaggagctggccaaccgcatcagtgcctgtcatttgcaattgc                                                                   >  4:274079‑M2/1‑52 (MQ=255)                                                                                                 ccTGGCCGCTGTCATCGCCGCGCCGGGCGAACGAGCGAAGGCTGGCGGTGATgcggccaggcttcactggccaaggcagtagaggccaccctgcaggagctggccaaccgcatcagtgcctgtcatttgcaattgc                                                                   <  3:274079‑M2/136‑85 (MQ=255)                                                                                                 ccTGGCCGCTGTCATCGCCGCGCCGGGCGAACGAGCGAAGGCTGGCGGTGATGCGGCCCATGCGGTCGATCAGGTCATTCATGGTGCGCAGGTTGGTGCTGGC‑GGTTTCCAGCGCCCCGCGCTCGAGGAAGCGCACTGTATTGCCAGa                                                      >  6:80034/1‑148 (MQ=255)                                                                                                  cTGGCTGCTGTCATCGCCGCGCCGGGCGAACGAGCGAAGGCTGGCGGTGATGCGGCCCATGCGGTCGATCAGGTCATTCATGGTGCGCAGGTTGGTGCTGGC‑GGTTTCCAGCGCCCCGCGCTCGAGGAAGCGCACTGTATTGCCAGaaa                                                    <  4:59155/149‑1 (MQ=255)                                                                                                  cTGGCCGCTGTCATCGCCGCGCCGGGCGAACGAGCGAAGGCTGGCGGTGATgcggccaggcttcactggccaaggcagtagaggccaccctgcaggtgctggccaaccgcatcagtgcctgtcatttgcaattgcaccaccagttcgag                                                     <  1:85676‑M2/149‑99 (MQ=255)                                                                                                  cTGGCCGCTGTCATCGCCGCGCCGGGCGAACGAGCGAAGGCTGGCGGTGATGCGGCCCATGCGGTCGATCAGGTCATTCATGGTGCGCAGGTTGGTGCTGGC‑GGTTTCCAGCGCCCCGCGCTCGAGGAAGCGCACTGTATTGCCAGaaa                                                    <  3:208413/149‑1 (MQ=255)                                                                                                   tGGCCGCTGTCATCGCCGCGCCGGGCGATCGAGCGAAGGCTGGCGGTGATgcggcgaggcttcactggccaaggcagtagaggccaccctgcaggtgctggccatccgcatcagtgcctgtgatttgcaattgcaccagcagttcgcg                                                     <  7:90450‑M2/148‑99 (MQ=255)                                                                                                   tGGCCGCTGTCATCGCCGCGCCGGGCGAACGAGCGAAGGCTGGCGGTGATgcggccaggcttcactggccaaggcagtagaggccaccctgcaggtgctggccaaccgcatcagtgcctgtcatttgcaattgcaccaccagttcgag                                                     <  8:147470‑M2/148‑99 (MQ=255)                                                                                                     gCCGCTGTCATCGCCGCGCCGGGCGAACGAGCGAAGGCTGGCGGTGATgcggccaggcttcactggccaaggcagtagaggccaccctgcaggtgctggccaaccgcatcagtgcctgtcatttgcaattgcaccacgagttcgagga                                                   >  7:147470‑M2/1‑48 (MQ=255)                                                                                                     gCCGCTGTCATCGCCGCGCCGGGCGAACGAGCGAAGGCTGGCGGTGATgcggccaggcttcactggccaaggcagtagaggccaccctgcaggtgctggccaaccgcatcagtgcctgtcatttgcaattgcaccaccagttcgaggac                                                  <  1:241767‑M2/149‑102 (MQ=255)                                                                                                     gCCGCTGTCATCGCCGCGCCGGGCGAACGAGCGAAGGCTGGCGGTGATGCGGCCCATGCGGTCGATCAGGTCATTCATGGTGCGCAGGTTGGTGCTGGCGGGTTTCCAGCGCCCCGCGCTCGAGGAAGCGCACTGTATTGCCAGAAAgg                                                  <  1:261790/149‑1 (MQ=255)                                                                                                     gCCGCTGTCATCGCCGCGCCGGGCGAACGAGCGAAGGCTGGCGGTGATGCGGCCCATGCGGTCGATCAGGTCATTCATGGTGCGCAGGTTGGTGCTGGC‑GGTTTCCAGCGCCCCGCGCTGGAGGAAGCGCACTGTATTGCCAGAAAggg                                                 >  5:323444/1‑149 (MQ=255)                                                                                                      ccGCTGTCATCGCCGCGCCGGGCGAACGAGCGAAGGCTGGCGGTGATGCGGCCCATGCGGGCGATCAGGTCATTCATGGTGCGCAGGTTGGTGCTGGC‑GGTTTCCAGCGCCCCGCGCTCGAGGAAGCGCACTGTATTGCCAGAAAGGGt                                                <  5:349006/149‑1 (MQ=255)                                                                                                         cTGTCATCGCCGCGCCGGGCGAACGAGCGAAGGCTGGCGGTGATGCGGCCCATGCGGTCGATCAGGTCATTCATGGTGCGCAGGTTGGTGCTGGC‑GGTTTCCAGCGCCCCGCGCTCGAGGAAGCGCACTGTATTGCCAGAAAGGGTgcg                                             <  5:61409/149‑1 (MQ=255)                                                                                                                  ccgcgccgGGCGAACGAGCGAAGGCTGGCGGTGATGCGGCCCATGCGGTCGATCAGGTCATTCATGGTGCGCAGGTTGGTGCTGGC‑GGTTTCCAGCGCCCCGCGCTCGAGGAAGCGCACTGTATTGCCAGAAAGGGTGCgcagcgcagc                                    <  6:62928/149‑1 (MQ=255)                                                                                                                   cgcgccgGGCGAACGAGCGAAGGCTGGCGGTGATGCGGCCCATGCGGTCGATCAGGTCATTCATGGTGCGCAGGTTGGTGCTGGC‑GGTTTCCAGCGCCCCGCGCTCGAGGAAGCGCACTGTATTGCCAGAAAGGGTGCGCAGCGCAGcc                                   <  8:173896/149‑1 (MQ=255)                                                                                                                    gcgccgGGCGAACGAGCGAAGGCTGGCGGTGATGCGGCCCATGCGGTCGATCAGGTCATTCATGGTGCGCAGGTTGGTGCTGGC‑GGTTTCCAGCGCCCCGCGCTCGAGGAAGCGCACTGTATTGCCAGAAAGGGTGCGCAGCGCAGCCa                                  <  6:323444/149‑1 (MQ=255)                                                                                                                       ccgGGCGAACGAGCGAAGGCTGGCGGTGATgcggccaggcttcactggccaaggcagtagaggccaccctgcaggtgctggccaaccgcatcagtgcctgtcatttgcaattgcaccaccagttcgaggaccagcaactggccatcgac                                >  2:241767‑M2/1‑30 (MQ=255)                                                                                                                          ggCGAACGAGCGAAGGCTGGCGGTGATGCGGCCCATGCGGTCGATCAGGTCATTCATGGTGCGCAGGTTGGTGCTGGC‑GGTTTCCAGCGCCCCGCGCTCGAGGAAGCGCACTGTATTGCCAGAAAGGGTGCGCAGCGCAGCCAGTGGCt                            <  7:322900/149‑1 (MQ=255)                                                                                                                           gCGAACGAGCGAAGGCTGGCGTTGATGCGGCCCATGCGGTCGATCAGGTCATTCATGCTGCGCAGGTTGGTGCTGGC‑GGTTTCCAGCGCCCCGCGCTCGAGGAAGCGCACTGTATTGCCAGAAAGGGTgcgcag                                          >  4:93628/1‑134 (MQ=255)                                                                                                                           gCGAACGAGCGAAGGCTGGCGGTGATGCGGCCCATGCGGTCGATCAGGTCATTCATGGTGCGCAGGTTGGTGCTGGC‑GGTTTCCAGCGCCCCGCGCTCGAGGAAGCGCACTGTATTGCCAGAAAGGGTgcgcag                                          <  3:93628/134‑1 (MQ=255)                                                                                                                              aaCGAGCGAAGGCTGGCGGTGATGCGGCCCATGCGGTCGATCAGGTCATTCATGGTGCGCAGGTTGGTGCTGGC‑GGTTTCCAGCGCCCCGCGCTCGAGGAAGCGCACTGTATTGCCAGAAAGGGTGCGCAGCGCAGCCAGTGGCTGGtt                        <  4:37090/149‑1 (MQ=255)                                                                                                                                 gAGCGAAGGCTGGCGGTGATGCGGCCCATGCGGTCGATCAGGTCATTCATGGTGCGCAGGTTGGTGCTGGC‑GGTTTCCAGCGCCCCGCGCTCGAGGAAGCGCACTGTATTGCCAGAAAGGGTGCgcagcgcagc                                    <  6:233608/134‑1 (MQ=255)                                                                                                                                 gAGCGAAGGCTGGCGGTGATGCGGCCCATGCGGTCGATCAGGTCATTCATGGTGCGCAGGTTGGTGCTGGC‑GGTTTCCAGCGCCCCGCGCTCGAGGAAGCGCACTGTATTGCCAGAAAGGGTGCgcagcgcagc                                    >  5:233608/1‑134 (MQ=255)                                                                                                                                 gAGCGAAGGCTGGCGGTGATGCGGCCCATGCGGTCGATCAGGTCATTCATGGTGCGCAGGTTGGTGCTGGC‑GGTTTCCAGCGCCCCGCGCTCGAGGAAGCGCACTGTATTGCCAGAAAGGGTGCGCAGCGCAGCCAGTGGCTGGTTCAg                     >  5:187919/1‑149 (MQ=255)                                                                                                                                   gCGAAGGCTGGCGGTGATGCGGCCCATGCGGTCGATCAGGTCATTCATGGTGCGCAGGTTGGTGCTGGC‑GGTTTCCAGCGCCCCGCGCTCGAGGAAGCGCACTGTATTGCCAGAAAGGGTGCgcagcgcagc                                    <  7:257352/132‑1 (MQ=255)                                                                                                                                   gCGAAGGCTGGCGGTGATGCGGCCCATGCGGTCGATCAGGTCATTCATGGTGCGCAGGTTGGTGCTGGC‑GGTTTCCAGCGCCCCGCGCTCGAGGAAGCGCACTGTATTGCCAGAAAGGGTGCgcagcgcagc                                    >  8:257352/1‑132 (MQ=255)                                                                                                                                      aaGGCTGGCGGTGATGCGGCCCATGCGGTCGATCAGGTCATTCATGGTGCGCAGGTTGGTGCTGGC‑GGTTTCCAGCGCCCCGCGCTCGAGGAAGCGCACTGTATTGCCAGAAAGGGTGCGCAGCGCAGCCAGTGGCTGGTTCAGCTCGt                >  4:80242/1‑149 (MQ=255)                                                                                                                                        ggCTGGCGGTGATGCGGCCCATGCGGTCGATCAGGTCATTCATGGTGCGCAGGTTGGTGCTGGC‑GGTTTCCAGCGCCCCGCGCTCGAGGAAGCGCACTGTATTGCCAGAAAGGGTGCGCAGCGCAGCCAGTGGCTGGTTCAGCTCGTgg              <  5:220230/149‑1 (MQ=255)                                                                                                                                        ggCTGGCGGTGATGCGGCCCATGCGGTCGATCAGGTCATTCATGGTGCGCAGGTTGGTGCTGGC‑GGTTTCCAGCGCCCCGCGCTCGAGGAAGCGCACTGTATTGCCAGAAAGGGTGCGCAGCGCAGCCAGTGGCTGGTTCAGCTCGTgg              <  6:15567/149‑1 (MQ=255)                                                                                                                                         gCTGGCGGTGATGCGGCCCATGCGGTCGATCAGGTCATTCATGGTGCGCAGGTTGGTGCTGGC‑GGTTTCCAGCGCCCCGCGCTCGAGGAAGCGCACTGTATTGCCAGAAAGGGTGCGCAGCGCAGCCAGTGGCTGGTTCAGCTCGTggg             <  4:195049/149‑1 (MQ=255)                                                                                                                                                gTGATGCGGCCCATGCGGTCGATCAGGTCATTCATGGTGCGCAGGTTGGTGCTGGC‑GGTTTCCAGCGCCCCGCGCTCGAGGAAGCGCACTGTATTGCCAGAAAGGGTGCGCAGCGCAGCCAGTGGCTGGTTCAGCTCGTGGGCAATGCt      >  5:230313/1‑149 (MQ=255)                                                                                                                                                    tGCGGCCCATGCGGTCGATCAGGTCATTCATGGTGCGCAGGTTGGTGCTGGC‑GGTTTCCAGCGCCCCGCGCTCGAGGAAGCGCACTGTATTGCCAGAAAGGGTGCGCAGCGCAGCCAGTGGCTGGTTCAGCTCGTGGGCAATGCtggtg  <  5:80034/149‑1 (MQ=255)                                                                                                                                                    |                                                                                                                                                      GCTGGTCCTCGAACTGGTGGTGCAATTGCAAATGACAGGCACTGATGCGGTTGGCCAGCACCTGCAGGGTGGCCTCTACTGCCTTGGCCAGTGAAGCCTGGCCGCTGTCATCGCCGCGCCGGGCGAACGAGCGAAGGCTGGCGGTGATGCGGCCCATGCGGTCGATCAGGTCATTCATGGTGCGCAGGTTGGTGCTGGC‑GGTTTCCAGCGCCCCGCGCTCGAGGAAGCGCACTGTATTGCCAGAAAGGGTGCGCAGCGCAGCCAGTGGCTGGTTCAGCTCGTGGGCAATGCTGGTG  >  NC_002947/1221673‑1221968

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.