New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 1225841 = | 48 (0.850) | 3 (0.060) | 3/248 | NT | 6.0% | coding (650/921 nt) | gltI | glutamate/aspartate ABC transporter substrate‑binding protein |
? | NC_002947 | 1225900 = | 48 (0.890) | coding (591/921 nt) | gltI | glutamate/aspartate ABC transporter substrate‑binding protein |
TTTGAACGCAGCGTCATCCTTGCGCACCATGCAGCCGTAGATTTCGTACGACTGAGGGGTACCGGTGATGACCCAGTCCGCTGGCTTGCGCGCCTTGGCCATTTCACCGGCGAGCA‑GGGCGTCGTCCATCATGAAGGCCACGGCGCGGCCGCTTTCGAGCATGTTGAAGGCTTCACCG‑TGGTCCTTGGCGGAAATCACGTTCATCTTCATCTGCTTGTCGGCGTTCATCGCCTTGAGGATGCGCTCGGAGGTGGTACCGGCGGTGGTCACCACGTTCTTGCCGGCCAGGTCCGG > NC_002947/1225753‑1226046 | tttGCACGCAGAGTCATCCTTGCGGACCATGCAGCCGTAGATTTAGTACGACTGAGTGGTACCGGTGATGACCCAGTCCGCTGGCTTGCGCGCCTTGGCCATTTGAGCGGCGAGCA‑GTGCGTCGTCCATCATGAAGGCCACGGCGCgg < 4:240677/148‑1 (MQ=255) aaggcgatgaacgccgacaagcagatgaagatgaacgtgatttccgccaaggaccacggtgaagccttcaacatgctcgaaagcggcCGCGCCTTGGCCATTTCACCGGCGAGCA‑GGGCGTCGTCCATCATGAAGGCCACGGCGCgg > 4:279612‑M1/88‑147 (MQ=255) tGAACGCAGCGTCATCCTTGCGCAACATGCAGCCGTAGATTTCGTACGACTGAGGGGTACCGGTGATGACCCAGGCCGCTGGCTTGCGCGCCTTGGCCATTTCACCGGCGAGCA‑GGGCGTCGTCCATCATGAAGGCCACGGCGCGGcc < 6:337234/148‑1 (MQ=255) aaCGCAGCGTCATCCTTGCGCACCATGCAGCCGTAGATTTCGTACGACTGAGGGGTACCGGTGATGACCCAGTCCACTGGCTTGCGCGCCTTGGCCATTTCACCGGCGAGCA‑GGGCGTCGTCCATCATGAAGGCCACGGCGCGGCCGCt > 5:58995/1‑149 (MQ=255) gCGTCATCCTTGCGCACCATGCAGCCGTAGATTTCGTACGACTGAGGGGTACCGGTGATGACCCAGTCCGCTGGCTTGCGCGCCTTGGCCATTTCACCGGCGAGCACGGGCGTCGTCCATCATGAAGGCCACGGCGCGGCCGCTTTCGa < 1:68971/149‑1 (MQ=255) gTCATCCTTGCGCACCATGCAGCCGTAGATTTCGTACGACTGAGGGGTACCGGTGATGACCCAGTCCGCTGGCTTGCGCGCCTTGGCCATTTCACCGGCGAGCA‑GGGCGTCGTCCATCATGAAGGCCACGGCGCGGCCGCTTTCGAGCa > 6:110398/1‑149 (MQ=255) tCCTTGCGCACCATGCAGCCGTAGATTTCGTACGACTGAGGGGTACCGGTGATGACCCAGTCCGCTGGCTTGCGCGCCTTGGCCATTTCACCGGCGAGCA‑GGGCGTCGTCCATCATGAAGGCCACGGCGCGGCCGCTTTCGAGCATGtt < 5:110398/149‑1 (MQ=255) gcgcACCATGCAGCCGTAGATTTCGTACGACTGAGGGGTACCGGTGATGACCCAGTCCGCTGGCTTGCGCGCCTTGGCCATTTCACCGGCGAGCA‑GGGCGTCGTCCATCATGAAGGCCACGGCGCGGCCGCTTTCGAGCATGTTGaa < 3:116387/147‑1 (MQ=255) cgcACCATGCAGCCGTAGATTTCGTACGACTGAGGGGTACCGGTGATGACCCAGTCCGCTGGCTTGCGCGCCTTGGCCATTTCACCGGCGAGCA‑GGGCGTCGTCCATCATGAAGGCCACGGCGCGGCCGCTTTCGAGCATGTTGAAGGc < 4:295484/149‑1 (MQ=255) cATGCAGCCGTAGATTTCGTACGACTGAGGGGTACCGGTGATGACCCAGTCCGCTGGCTTGCGCGCCTTGGCCATTTCACCGGCGAGCA‑GGGCGTCGTCCATCATGAAGGCCACGGCGCGGCCGCTTTCGAGCATGTTGAAGGCTTCAc > 6:176028/1‑149 (MQ=255) gTAGATTTCGTACGACTGAGGGGTACCGGTGATGACCCAGTCCGCTGGCTTGCGCGCCTTGGCCATTTCACCGGCGAGCA‑GGGCGTCGTCCATCATGAAGGCCACGGCGCGGCCGCTTTAGAGCATGTTGAAGGCTTCACCG‑TGGTCCt > 6:120757/1‑149 (MQ=255) tAGATTTCGTACGACTGAGGGGTACCGGTGATGACCCAGTCCGCTGGCTTGCGCGCCTTGGCCATTTCACCGGCGAGCA‑GGGCGTCGTCCATCATGAAGGCCACGGCGCGGCCGCTTTCGAGCATGTTGAAg > 4:221138/1‑132 (MQ=255) tAGATTTCGTACGACTGAGGGGTACCGGTGATGACCCAGTCCGCTGGCTTGCGCGCCTTGGCCATTTCACCGGCGAGCA‑GGGCGTCGTCCATCATGAAGGCCACGGCGCGGCCGCTTTCGAGCATGTTGAAg < 3:221138/132‑1 (MQ=255) tttCGTACGACTGAGGGGTACCGGTGATGACCCAGTCCGCTGGCTTGCGCGCCTTGGCCATTTCACCGGCGAGCA‑GGGCGTCGTCCATCATGAAGGCCACGGCGCGGCCGCTTTCGAGCATGTTGAAGGCTTCACCG‑TGGTCCTTGGCg < 7:231680/149‑1 (MQ=255) cGTACGACTGAGGGGTACCGGTGATGACCCAGTCCGCTGGCTTGCGCGCCTTGGCCATTTCACCGGCGAGCA‑GGGCGTCGTCCATCATGAAGGCCACGGCGCGGCCGCTTTCGAGCATGTTGAAGGCTTc > 5:348728/1‑130 (MQ=255) cGTACGACTGAGGGGTACCGGTGATGACCCAGTCCGCTGGCTTGCGCGCCTTGGCCATTTCACCGGCGAGCA‑GGGCGTCGTCCATCATGAAGGCCACGGCGCGGCCGCTTTCGAGCATGTTGAAGGCTTc < 6:348728/130‑1 (MQ=255) cGACTGAGGGGTACCGGTGATGACCCAGTCCGCTGGCTTGCGCGCCTTGGCCATTTCACCGGCGAGCA‑GGGCGTCGTCCATCATGAAGGCCACGGCGCGGCCGCTTTCGAGCATGTTGAAGGCTTCACCG‑TGGTCCTTGGCGGAAATc < 2:162821/148‑1 (MQ=255) gggTACCGGTGATGACCCAGTCCGCTGGCTTGCGCGCCTTGGCCATTTCACCGGCGAGCA‑GGGCGTCGTCCATCATGAAGGCCACGGCGCGGCCGCTTTCGAGCATGTTGAAGGCTTCACCG‑TGGTCCTTGGCGGAAATCACGttcatc < 5:132254/149‑1 (MQ=255) ggctACCGGTGATGACCCAGTCCGCTGGCTTGCGCGCCTTGGCCATTTCACCGGCGAGCA‑GGGCGTCGTCCATCATGAAGGCCACGGCGCGGCCGCTTTCGAGCATGTTGAAGGCTTCACCG‑TGGTCCTTGGCGGAAATCACGttcatc < 3:246852/146‑1 (MQ=255) aCCGGTGATGACCCAGTCCGCTGGCTTGCGCGCCTTGACCATTTCACCGGCGAGCA‑GGGCGTCGTCCATCATGAAGGCCACGGCGCGGCCGCTTTCGAGCATGTTGAAGGCTTCACCG‑TGGTCCTTGGCGGAAATCACGttcatcttca > 8:33895/1‑149 (MQ=255) cGGTGATGACCCAGTCCGCTGGCTTGCGCGCCTTGGCCATTTCACCGGCGAGCA‑GGGCGTCGTCCATCATGAAGGCCACGGCGCGGCCGCTTTCGAGCATGTTGAAGGCTTCACCG‑TGGTCCTTGGCGGAAATCACGttcatcttcatc > 1:154572/1‑149 (MQ=255) gTGATGACCCAGTCCGCTGGCTTGCGCGCCTTGGCCATTTCACCGGCGAGCA‑GGGCGTCGTCCATCATGAAGGCCACGGCGCGGCCGCTTTCGAGCATGTTGAAGGCTTCACCG‑TGGTCCTTGGCGGAAATCACGTTCATCTTCATCTg > 6:68574/1‑149 (MQ=255) gTGATGACCCAGTCCGCTGGCTTGCGCGCCTTGGCCATTTCACCGGCGAGCA‑GGGCGTCGTCCATCATGAAGGCCACGGCGCGGCCGCTTTCGAGCATGTTGAAGGCTTCACCG‑TGGTCCTTGGCGGAAATCACGTTCATCTTCATCTg > 6:15192/1‑149 (MQ=255) tgatgaCCCAGTACGCTGGCTTGCGCGCCTTGGCCATTTCACCGGCGAGCA‑GGGCGTCGTACATCATGAAGGCCACTTCGCGGCCGATTTAGAGCATGTTGAAGGCTTCACCG‑TGGTCCTTGGCGGAAATCACGTTCATCTTCATCTGc < 5:14915/149‑1 (MQ=255) gatgaCCCAGTCCGCTGGCTTGCGCGCCTTGGCCATTTCACCGGCGAGCA‑GGGCGTCGTCCATCATGAAGGCCACGGCGCGGCCGCTTTCGAGCATGTTGAAGGCTTCACCG‑TGGTCCTTGGCg < 8:286238/124‑1 (MQ=255) gatgaCCCAGTCCGCTGGCTTGCGCGCCTTGGCCATTTCACCGGCGAGCA‑GGGCGTCGTCCATCATGAAGGCCACGGCGCGGCCGCTTTCGAGCATGTTGAAGGCTTCACCG‑TGGTCCTTGGCg > 7:286238/1‑124 (MQ=255) ccAGTCCGCTGGCTTGCGCGCCTTGGCCATTTCACCGGCGAGCA‑GGGCGTCGTCCATCATGAAGGCCACGGCGCGGCCGCTTTCGAGCATGTTGAAGGCTTCACCG‑TGGTCCTTGGCGGAAATCACGTTCATCTTCATCTGCTTGTCgg > 3:111794/1‑149 (MQ=255) aGTCCGCTGGCTTGCGCGCCTTGGCCATTTCACCGGCGAGCA‑GGGCGTCGTCCATCATGAAGGCCACGGCGCGGCCGCTTTCGAGCATGTTGAAGGCTTCACCG‑TGGTCCTTGGCGGAAATCACGTTCATCTTCATCTGCTTGTCGGCg > 3:352871/1‑149 (MQ=255) cGCTGGCTTGCGCGCCTTGGCCATTTCACCGGCGAGCA‑GGGCGTCGTCCATCATGAAGGCCACGGCGCGGCCGCTTTCGAGCATGTTGAAGGCTTCACCG‑TGGTCCTTGGCGGAAATCACGTTCATCTTCATCTGCTTGTCg > 8:216082/1‑142 (MQ=255) cGCTGGCTTGCGCGCCTTGGCCATTTCACCGGCGAGCA‑GGGCGTCGTCCATCATGAAGGCCACGGCGCGGCCGCTTTCGAGCATGTTGAAGGCTTCACCG‑TGGTCCTTGGCGGAAATCACGTTCATCTTCATCTGCTTGTCg < 7:216082/142‑1 (MQ=255) cTGGCTTGCGCGACTTGGACATTTCACCGGCGAGCA‑GGGCGTCGTCCATCATGAAGGCCACGGCGCGGCCGCTTTCGAGCATGTTGAAGGCTTCACCG‑TGGTCCTTGGCGGAAATCACGTTCATCTTCATCTGCTTGTCGGCGTTCATc < 2:342426/149‑1 (MQ=255) tGGCTTGCGCGCCTTGGCCATTTCACCGGCGAGCA‑GGGCGTCGTCCATCATGAAGGCCACGGCGCGGCCGCTTTCGAGCATGTTGAAGGCTTCACCG‑TGGTCCTTGGCGGAAATCACGTTCATCTTCATCTGCTTGTCGGCGTTCATCg > 3:20355/1‑149 (MQ=255) cTTGCGCGCCTTGGCCATTTCACCGGCGAGCA‑GGGCGTCGTCCATCATGAAGGCCACGGCGCGGCCGCTTTCGAGCATGTTGAAGGCTTCACCG‑TGGTCCTTGGCGGAAATCACGTTCATCTTCATCTGCTTGTCGGCGTTCATCGCCt < 2:357889/149‑1 (MQ=255) ccgcgccgtggccttcatgatggacgacgccctgctcgccggtgaaatggccaaggcgcgGCCGCTTTCGAGCATGTTGAAGGCTTCACCG‑TGGTCCTTGGCGGAAATCACGTTCATCTTCATCTGCTTGTCGGCGTTCATCGCCtt > 4:279612‑M2/61‑147 (MQ=255) gcgccgtggccttcatgatggacgacgccctgctcgccggtgaaatggccaaggcgcgGCCGCTTTCGAGCATGTTGAAGGCTTCACCG‑TGGTCCTTGGCGGAAATCACGTTCATCTTCATCTGCTTGTCGGCGTTCATCGCCTTGa > 8:279967‑M2/59‑147 (MQ=255) gcgccgtggccttcatgatggacgacgccctgctcgccggtgaaatggccaaggcgcgGCCGCTTTCGAGCATGTTGAAGGCTTCACCG‑TGGTCCTTGGCGGAAATCACGTTCATCTTCATCTGCTTGTCGGCGTTCATCGCCTTGa < 7:279967‑M2/89‑1 (MQ=255) ttGGCCATTTCACCGGCGAGCA‑GGGCGTCGTCCATCATGAAGGCCACGGCGCGGCCGCTTTCGAGCATGTTGAAGGCTTCACCG‑TGGTCCTTGGCGGAAATCACGTTCATCTTCATCTGCTTGTCGGCGTTc < 4:256213/132‑1 (MQ=255) ttGGCCATTTCACCGGCGAGCA‑GGGCGTCGTCCATCATGAAGGCCACGGCGCGGCCGCTTTCGAGCATGTTGAAGGCTTCACCG‑TGGTCCTTGGCGGAAATCACGTTCATCTTCATCTGCTTGTCGGCGTTc > 3:256213/1‑132 (MQ=255) cATTTCACCGGCGAGCA‑GGGCGTCGTCCATCATGAAGGCCACGGCGCGGCCGCTTTCGAGCATGTTGAAGGCTTCACCG‑TGGTCCTTGGCGGAAATCACGTTCATCTTCATCTGCTTGTCGGCGTTCATCGCCTTGAGGATGCGCTCgg < 6:58995/149‑1 (MQ=255) cACCGGCGAGCA‑GGGCGTCGTCCATCATGAAGGCCACGGCGCGGCCGCTTTCGAGCATGTTGAAGGCTTCACCG‑TGGTCCTTGGCGGAAATCACGTTCATCTTCATCTGCTTGTCGGCGTTCATCGCCTTGAGGATGCGCTCGGAggt < 7:33895/148‑1 (MQ=255) aCCGGCGAGCA‑GGGCGTCGTCCATCATGAAGGCCACGGCGCGGCCGCTTTCGAGCATGTTGAAGGCTTCACCG‑TGGTCCTTGGCGGAAATCACGTTCATCTTCATCTGCTTGTCGGCGTTCATCGCCTTGAGGATGCGCTCGGAggtg < 4:20355/148‑1 (MQ=255) aCCGGCGAGCA‑GGGCGTCGTCCATCATGAAGGCCACGGCGCGGCCGCTTTCGAGCATGTTGAAGGCTTCACCG‑TGGTCCTTGGCGGAAATCACGTTCATCTTCATCTGCTTGTCGGCGTTCATCGCCTTGAGGATGCGCTCGGAggtg < 2:154572/148‑1 (MQ=255) aCCGGCGAGCA‑GGGCGTCGTCCATCATGAAGGCCACGGCGCGGCCGCTTTCGAGCATGTTGAAGGCTTCACCG‑TGGTCCTTGGCGGAAATCACGTTCATCTTCATCTGCTTGTCGGCGTTCATCGCCTTGAGGATGCGCTCGGAggtg < 5:68574/148‑1 (MQ=255) gCGAGCA‑GGGCGTCGTCCATCATGAAGGCCACGGCGCGGCCGCTTTCGAGCATGTTGAAGGCTTCACCG‑TGGTCCTTGGCGGAAATCACGTTCATCTTCATCTGCTTGTCGGCGTTCATCGCCTTGAGGATGCGCTCGGAGGTGGTAcc > 4:278200/1‑149 (MQ=255) gggCGTCGTCCATCATGAAGGCCACGGCGCGGCCGCTTTCGAGCATGTTGAAGGCTTCACCG‑TGGTCCTTGGCGGAAATCACGTTCATCTTCATCTGCTTGTCGGCGTTCATCGCCTTGAGGATGCGCTCGGAgg < 1:62123/135‑1 (MQ=255) gggCGTCGTCCATCATGAAGGCCACGGCGCGGCCGCTTTCGAGCATGTTGAAGGCTTCACCG‑TGGTCCTTGGCGGAAATCACGTTCATCTTCATCTGCTTGTCGGCGTTCATCGCCTTGAGGATGCGCTCGGAgg > 2:62123/1‑135 (MQ=255) gggCGTCGTCCATCATGAAGGCCACGGCGCGGCCGCTTTCGAGCATGTTGAAGGCTTCACCG‑TGGTCCTTGGCGGAAATCACGTTCATCTTCATCTGCTTGTCGGCGTTCATCGCCTTGAGGATGCGCTCGGAGGTGGTACCGGCggtg < 2:8845/149‑1 (MQ=255) tcgtcCATCATGAAGGCCACGGCGCGGCCGCTTTCGAGCATGTTGAAGGCTTCACCG‑TGGTCCTTGGCGGAAATCACGTTCATCTTCATCTGCTTGTCGGCGTTCATCGCCTTGAGGATGCGCTCGGAGGTGGTACCGGCGGTGGTcac > 2:96494/1‑149 (MQ=255) gtcCATCATGAAGGCCACGGCGCGGCCGCTTTCGAGCATGTTGAAGGCTTCACCGATGGTCCTTGGCGGAAATCACGTTCATCTTCATCTGCTTGTCGGCGTTCATCGCCTTGAGGATGCGCTCGGAGGTGGTACCGGCGGTGGTcac > 1:281283/1‑148 (MQ=255) atcatGAAGGCCACGGCGCGGCCGCTTTCGAGCATGTTGAAGGCTTCACCG‑TGGTCCTTGGCGGAAATCACGTTCATCTTCATCTGCTTGTCGGCGTTCATCGCCTTGAGGATGCGCTCGGAGGTGGTACCGGCGGTGGTCACCACGt > 4:84860/1‑148 (MQ=255) tcatGAAGGCCACGGCGCGGCCGCTTTCGAGCATGTTGAAGGCTTCACCG‑TGGTCCTTGGCGGAAATCACGTTCATCTTCATCTGCTTGTCGGCGTTCATCGCCTTGAGGATGCGCTCGGAGGTGGTACCGGCGGTGGTCACCACGTTc < 3:278200/149‑1 (MQ=255) gAAGGCCACGGCGCGGCCGCTTTCGAGCATGTTGAAGGCTTCACCG‑TGGTCCTTGGCGGAAATCACGTTCATCTTCATCTGCTTGTCGGCGt > 6:196663/1‑92 (MQ=255) gAAGGCCACGGCGCGGCCGCTTTCGAGCATGTTGAAGGCTTCACCG‑TGGTCCTTGGCGGAAATCACGTTCATCTTCATCTGCTTGTCGGCGt < 5:196663/92‑1 (MQ=255) ggCCACGGCGCGGCCGCTTTCGAGCATGTTGAAGGCTTCACCG‑TGGTCCTTGGCGGAAATCACGTTCATCTTCATCTGCTTGTCGGCGTTCATCGCCTTGAGGATGCGCTCGGAGGTGGTACCGGCGGTGGTCACCACGTTCTTGCCgg > 2:113540/1‑149 (MQ=255) ccACGGCGCGGCCGCTTTCGAGCATGTTGAAGGCTTCACCG‑TGGTCCTTGGCGGAAATCACGTTCATCTTCATCTGCTTGTCGGCGTTCATCGCCTTGAGGATGCGCTCGGAGGTGGTACCGGCGGTGGTCACCACGTTCTTGCCGGcc < 4:352871/149‑1 (MQ=255) cACGCCGCGGCCGCTTACGAGCATGTAGAAGGCATCACCG‑TGGTCGTTGGCCGAAATCACGTAGATCTTCATCTGCTTGTCGGCGTTCTTCGCCTTGAGGAAGCCCTCCGAGGTGGTACCGGCGGTGGTCACCACGTTCTTGCCGGCCa > 8:313474/1‑149 (MQ=255) gGCCGCTTTCGAGCATGTTGAAGGCTTCACCG‑TGGTCCTTGGCGGAAATCACGTTCATCTTCATCTGCTTGTCGGCGTTCATCGCCTTGAGGATGCGCTCGGAGGTGGTACCGGCGGTGGTCACCACGTTCTTGCCGGCCAGGTCCgg > 4:14830‑M2/2‑148 (MQ=255) | TTTGAACGCAGCGTCATCCTTGCGCACCATGCAGCCGTAGATTTCGTACGACTGAGGGGTACCGGTGATGACCCAGTCCGCTGGCTTGCGCGCCTTGGCCATTTCACCGGCGAGCA‑GGGCGTCGTCCATCATGAAGGCCACGGCGCGGCCGCTTTCGAGCATGTTGAAGGCTTCACCG‑TGGTCCTTGGCGGAAATCACGTTCATCTTCATCTGCTTGTCGGCGTTCATCGCCTTGAGGATGCGCTCGGAGGTGGTACCGGCGGTGGTCACCACGTTCTTGCCGGCCAGGTCCGG > NC_002947/1225753‑1226046 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |