New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	3092861 =	43 (0.760)	3 (0.060)	3/246	NT	6.6%	coding (822/939 nt)	PP_2701	LysR family transcriptional regulator
	?	NC_002947	3092943 =	44 (0.820)					coding (904/939 nt)	PP_2701	LysR family transcriptional regulator

GGTATCGATTGCGAGTTCGTCGCCATGGCGGTGCAGGAGTTGATTCCGGATTACCCCATCAATCTGGTCTGCATCGACCGCCACAGCCTCACGGCGCCTGCCCAGGAGCTGTTCCACAGCTTGCGCGGGCAGGTGCTCAAGCAGACCCGCCCCGTGGGGTCAGAAGTGGTAGTACATGCCTAGTGAGACGTTGCTTGGGTTATCGCCCGCCTGAT‑CCACCGGGGTG‑CCGGCGTAGGTGACCGACGAGGCGCGCTGGTTGGCGATCATGCCAAGGCGTCCATAAAGGGCCCAGCGG  >  NC_002947/3092796‑3093090                                                                                                                                                    |                                                                                                                                                      aggcgggcgataacccaagcaacgtctcactaggcatgtactaccacttctgaccccacggggcgGGTCTGCATCGACCGCCACAGCCTCACGGCGCCTGCCCAGGAGCTGTTCCACAGCTTGCGCGGGCAGGTGCTCAAGCAGAccc                                                                                                                                                       >  4:254206‑M1/66‑148 (MQ=255)   tATCGATTGCGAGTTCGTCGCCATGGCGGTGCAGGAGTTGATTCCGGATTACCCCATCAATCTGGTCTGCATCGACCGCAACAGCCTCACGGCGCCTGCCCAGGAGCTGTTCCACAGCTTGCGCGGGCAGGTGCTCAAGCAGACCCGcc                                                                                                                                                    >  4:213344/1‑149 (MQ=255)                ttCGTCGCCATGGCGGTGCAGGAGTTGATTCCGGATTACCCCATCAATCTGGTCTGCATCGACCGCCACAGCCTCACGGCGCCTGCCCAGGAGCTGTTCCACAGCTTGCGCGGGCAGGTGCTCAAGCAGACCCGCCCCGTGGGGTCAg                                                                                                                                        >  8:336462/1‑148 (MQ=255)                    tcgCCATGGCGGTGCAGGAGTTGATTCCGGATTACCCCATCAATCTGGTCTGCATCGACCGCCACAGCCTCACGGCGCCTGCCCAGGAGCTGTTCCACAGCTTGCGCGGGCAGGTGCTCAAGCAGACCCGCCCCGTGGGGTCAGAAGTg                                                                                                                                   <  3:20718/149‑1 (MQ=255)                      gCCATGGCGGTGCAGGAGTTGATTCCGGATTACCCCATCAATCTGGTCTGCATCGACCGCCACAGCCTCACGGCGCCTGCCCAGGAGCTGTTCCACAGCTTGCGCGGGCAGGTGCTCAAGCAGACCCGCCCCGTGGGGTCAGAAGTgg                                                                                                                                  <  7:336462/148‑1 (MQ=255)                       ccATGGCGGTGCAGGAGTTGATTCCGGATTACCCCATCAATCTGGTCTGCATCGACCGCCACAGCCTCACGGCGCCTGCCCAGGAGCTGTTCCACAGCTTGCGCGGGCAGGTGCTCAAGCAGACCCGCCCCGTGGGGTCAGAAGTGgta                                                                                                                                <  5:231596/149‑1 (MQ=255)                         aTGGCGGTGCAGGAGTTGATTCCGGATTACCCCATCAATCTGGTCTGCATCGACCGCCACAGCCTCACGGCGCCTGCCCAGGAGCTGTTCCACAGCTTGCGCGGGCAGGTGCTCAAGCAGACCCGCCCCGTGGGGTCAGAAGTGgtagt                                                                                                                              <  4:214254/149‑1 (MQ=255)                                                ggATTACCCCATCAATCTGGTCTGCATCGACCGCCACAGCCTCACGGCGCCTGCCCAGGAGCTGTTCCACAGCTTGCGCGGGCAGGTGCTCAAGCAGACCCGCCCCGTGGGGTCAGAAGTGGTAGTACATGCCTAGTGAGACGTTGCtt                                                                                                       <  3:213344/149‑1 (MQ=255)                                                      ccccATCAATCTGGTCTGCATCGACCGCCACAGCCTCACGGCGCCTGCCCAGGAGCTGTTCCACAGCTTGCGCGGGCAGGTGCTCAAGCAGACCCGCCCCGTGGGGTCAGAAGTGGTAGTACATGCCTAGTGAGACGTTGCTTGGGTTa                                                                                                 <  3:125759/149‑1 (MQ=255)                                                        ccATCAATCTGGTCTGCATCGACCGCCACAGCCTCACGGCGCCTGCCCAGGAGCTGTTCCACAGCTTGCGCGGGCAGGTGCTCAAGCAGACCCGCCCCGTGGGGTCAGAAGTGGTAGTACATGCCTAGTGAGCCGTTGCTTGGGTTATc                                                                                               >  8:90059/1‑149 (MQ=255)                                                         cATCAATCTGGTCTGCATCGACCGCCACAGCCTCACGGCGCCTGCCCAGGAGCTGTTCCACAGCTTGCGCGGGCAGGTGCTCAAGCAGACCCGCCCCGTGGGGTCAGAAGTGGTAGTACATGCCTAGTGAGACGtt                                                                                                           >  5:364586/1‑136 (MQ=255)                                                         cATCAATCTGGTCTGCATCGACCGCCACAGCCTCACGGCGCCTGCCCAGGAGCTGTTCCACAGCTTGCGCGGGCAGGTGCTCAAGCAGACCCGCCCCGTGGGGTCAGAAGTGGTAGTACATGCCTAGTGAGACGtt                                                                                                           <  6:364586/136‑1 (MQ=255)                                                         cATCAATCTGGTCTGCATCGACCGCCACAGCCTCACGGCGCCTGCCCAGGAGCTGTTCCACAGCTTGCGCGGGCAGGTGCTCAAGCAGACCCGCCCCGTGGGGTCAGAAGTGGTAGTACATGCCTAGTGAGACGTTGCTTGGGTTATcg                                                                                              >  3:168598/1‑149 (MQ=255)                                                         cATCAATCTGGTCTGCATCGACCGCCACAGCCTCACGGCGCCTGCCCAGGAGCTGTTACACAGCTTGCGCGGGCAGGTGCTCAAGCAGACCCGCCCCGTGGGGTCAGAAGTGGTAGTACATGCCTAGTGAGACGTTGCTTGGGTTATcg                                                                                              >  6:29626/1‑149 (MQ=255)                                                           tCAATCTGGTCTGCATCGACCGCCACAGCCTCACGGCGCCTGCCCAGGAGCTGTTCCACAGCTTGCGCGGGCAGGTGCTCAAGCAGACCCGCCCCGTGGGGTCAGAAGTGGTAGTACATGCCTAGTGAGACGTTGCTTGGGTTATcgcc                                                                                            <  5:29626/149‑1 (MQ=255)                                                                 gggtctgcttgagcacctgcccgcgcaagctgtggaacagctcctgggcaggcgccgtgaggctgtggcggtcgatgcagaccCGCCCCGTGGGGTCAGAAGTGGTAGTACATGCCTAGTGAGACGTTGCTTGGGTTATCGCCCGCCt                                                                                       >  4:254206‑M2/84‑148 (MQ=255)                                                                  ggtctgcttgagcacctgcccgcgcaagctgtggaacagctcctgggcaggcgccgtgaggctgtggcggtcgatgcagaccCGCCCCGTGGGGTCAGAAGTGGTAGTACATGCCTAGTGTGACGTTGCTTGGGTTATCGCCCGCCTGa                                                                                     >  7:166979‑M2/83‑149 (MQ=255)                                                                   GTCTGCATCGACCGCCACAGCCTCACGGCGCCTGCCCAGGAGCTGTTCCACAGCTTGCGCGGGCAGGTGCTCAAGCAGACCCGCCCCGTGGGGTCAGAAGTGGTAGTACATGCCTAGTGAGACGTTGCTTGGGTTATcgcccgcc                                                                                        >  2:255056‑M1/1‑145 (MQ=255)                                                                         aTCGACCGCCACAGCCTCACGGCGCCTGCCCAGGAGCTGTTCCACAGCTTGCGCGGGCAGGTGCTCAAGCAGACCCGCCCCGTGGGGTCAGAAGTGGTAGTACATGCCTAGTGAGACGTTGCTTGGGTTATCGCCCGCCTg                                                                                      <  2:62138/141‑1 (MQ=255)                                                                         aTCGACCGCCACAGCCTCACGGCGCCTGCCCAGGAGCTGTTCCACAGCTTGCGCGGGCAGGTGCTCAAGCAGACCCGCCCCGTGGGGTCAGAAGTGGTAGTACATGCCTAGTGAGACGTTGCTTGGGTTATCGCCCGCCTg                                                                                      >  1:62138/1‑141 (MQ=255)                                                                             aCCGCCACAGCCTCAGTGCGCCTGCCCAGGAGCTGTTCCACAGCTTGCGCGGGCAGGTGCTCAAGCAGACCCGCCCCGTGGGGTCAGAAGTGGTAGTACATGCCTAGTGAGACGTTGCTTGGGTTATCGCCCGCCTGAT‑CCACCggg                                                                           <  5:222679/147‑1 (MQ=255)                                                                             aCCGCCACAGCCTCACGGCGCCTGCCCAGGAGCTGTTCCACAGCTTGCGCGGGCAGGTGCTCAAGCAGACCCGCCCCGTGGGGTCAGAAGTGGTAGTACATGCCTAGTGAGACGTTGCTTGGGTTATCGCCCGCCTGAT‑CCACCg                                                                             >  3:335244/1‑145 (MQ=255)                                                                             aCCGCCACAGCCTCACGGCGCCTGCCCAGGAGCTGTTCCACAGCTTGCGCGGGCAGGTGCTCAAGCAGACCCGCCCCGTGGGGTCAGAAGTGGTAGTACATGCCTAGTGAGACGTTGCTTGGGTTATCGCCCGCCTGAT‑CCACCg                                                                             <  4:335244/145‑1 (MQ=255)                                                                             aCCGCCACAGACTCACGGCGCCTGCCCAGGAGCTGTTCCACAGCTTGAGCGGGCAGGTGCTCAAGCAGACCCGCCCCGTGGGGTCAGAAGTGGTAGTACATGACTAGTGAGACGTTTCTTGGGTTATCGCCCGCCTGAT‑CCACAggg                                                                           >  6:222679/1‑147 (MQ=255)                                                                                 ccACAGCCTCACGGCGCCTGCCCAGGAGCTGTTCCACAGCTTGCGCGGGCAGGTGCTCAAGCAGACCCGCCCCGTGGGGTCAGAAGTGGTAGTACTTGCCTAGTGAGACGTTGCTTGGGTTATCGCCCGCCTGAT‑CCACCGGGGTG‑CCg                                                                    >  1:295372/1‑149 (MQ=255)                                                                                  cacaGCCTCACGGCGCCTGCCCAGGAGCTGTTCCACAGCTTGCGCGGGCAGGTGCTCAAGCAGACCCGCCCCGTGGGGTCAGAAGTGGTAGTACATGCCTAGTGAGACGTTGCTTgg                                                                                                     <  6:52559/117‑1 (MQ=255)                                                                                  cacaGCCTCACGGCGCCTGCCCAGGAGCTGTTCCACAGCTTGCGCGGGCAGGTGCTCAAGCAGACCCGCCCCGTGGGGTCAGAAGTGGTAGTACATGCCTAGTGAGACGTTGCTTgg                                                                                                     >  5:52559/1‑117 (MQ=255)                                                                                  cacaGCCTCACGGCGCCTGCCCAGGAGCTGTTCCACAGCTTGCGCGGGCAGGTGCTCAAGCAGACCCGCCCCGTGGGGTCAGAAGTGGTAGTACATGCCTAGTGAGACGTTGCTTGGGTTATCGCCCGCCTGAT‑CCACCGGGGTG‑CCgg                                                                   >  5:331923/1‑149 (MQ=255)                                                                                        cTCACGGCGCCTGCCCAGGAGCTGTTCCACAGCTTGCGCGGGCAGGTGCTCAAGCAGACCCGCCCCGTGGGGTCAGAAGTGGTAGTACATGCCTAGTGAGACGTTGCTTGGGTTATCGCCCGCCTGAT‑CCACCGGGGTG‑CCGGCGTAgg                                                             >  1:39264/1‑149 (MQ=255)                                                                                         tCACGGCGCCTGCCCAGGAGCTGTTCCACAGCTTGCGCGGGCAGGTGCTCAAGCAGACCCGCCCCGTGGGGTCAGAAGTGGTAGTACATGCCTAGTGAGACGTTGCt                                                                                                        <  4:291787/107‑1 (MQ=255)                                                                                         tCACGGCGCCTGCCCAGGAGCTGTTCCACAGCTTGCGCGGGCAGGTGCTCAAGCAGACCCGCCCCGTGGGGTCAGAAGTGGTAGTACATGCCTAGTGAGACGTTGCt                                                                                                        >  3:291787/1‑107 (MQ=255)                                                                                           aCGGCGCCTGCCCAGGAGCTGTTCCACAGCTTGCGCGGGCAGGTGCTCAAGCAGACCCGCCCCGTGGGGTCAGAAGTGGTAGTACATGCCTAGTGAGACGTTGCTTGGGTTATCGCCCGCCTGAt                                                                                    <  7:66784/125‑1 (MQ=255)                                                                                           aCGGCGCCTGCCCAGGAGCTGTTCCACAGCTTGCGCGGGCAGGTGCTCAAGCAGACCCGCCCCGTGGGGTCAGAAGTGGTAGTACATGCCTAGTGAGACGTTGCTTGGGTTATCGCCCGCCTGAt                                                                                    >  8:66784/1‑125 (MQ=255)                                                                                             ggCGCCTGCCCAGGAGCTGTTCCACAGCTTGCGCGGGCAGGTGCTCAAGCAGACCCGCCCCGTGGGGTCAGAAGTGGTAGTACATGCCTAGTGAGACGTTGCtt                                                                                                       <  5:355633/104‑1 (MQ=255)                                                                                             ggCGCCTGCCCAGGAGCTGTTCCACAGCTTGCGCGGGCAGGTGCTCAAGCAGACCCGCCCCGTGGGGTCAGAAGTGGTAGTACATGCCTAGTGAGACGTTGCtt                                                                                                       >  6:355633/1‑104 (MQ=255)                                                                                                     cccAGGAGCTGTTCCACAGCTTGCGCGGGCAGGTGCTCAAGCAGACCCGCCCCGTGGGGTCAGAAGTGGTAGTACATGCCTAGTGAGACGTTGCTTGGGTTATCGCCCGCCTGAT‑CCACCGGGGTG‑CCGGCGTAGGTGACCGACGAg                                                  <  4:168598/147‑1 (MQ=255)                                                                                                            ctgggcaggcgccgtgaggctgtggcggtcgatgcagaccCGCCCCGTGGGGTCAGAAGTGGTAGTACATGCCTAGTGAGACGTTGCTTGGGTTATCGCCCGCCTGAT‑CCACCGGGGTG‑CCGGCGTAGGTGACCGACGAGGCGCGCTgg                                         <  3:254206‑M2/109‑1 (MQ=255)                                                                                                              tGTTCCACAGCTTGCGCGGGCAGGTGCTCAAGCAGACCCGCCCCGTGGGGTCAGAAGTGGTAGTACATGCCTAGTGAGACGTTGCTTGGGTTATCGCCCGCCTGAT‑CCACCGGGGTG‑CCGGCGTAGGTGACCGACGAGGCGCGCTGGtt                                       >  8:715/1‑149 (MQ=255)                                                                                                                  ccACAGCTTGCGCGGGCAGGTGCTCAAGCAGACCCGCCCCGTGGGGTCAGAAGTGGTAGTACATGCCTAGTGAGACGTTGCTTGGGTTATCGCCCGCCTGATCCCACCGGGGTG‑CCGGCGTAGGTGACCGACGAGGCGCGCTGGTTgg                                     <  1:69167/148‑1 (MQ=255)                                                                                                                  ccACAGCTTGCGCGGGCAGGTGCTCAAGCAGACCCGCCCCGTGGGGTCAGAAGTGGTAGTACATGCCTAGTGAGACGTTGCTTGGGTTATCGCCCGCCTGAT‑CCACCGGGGTG‑CCGGCGTAGGTGACCGACGAGGCGCGCTGGTTgg                                     >  2:69167/1‑147 (MQ=255)                                                                                                                  ccACAGCTTGCGCGGGCAGGTGCTCAAGCAGACCCGCCCCGTGGGGTCAGAAGTGGTAGTACATGCCTAGTGAGACGTTGCTTGGGTTATCGCCCGCCTGAT‑CCACCGGGGTG‑CCGGCGTAGGTGACCGACGAGGCGCGCTGGTTGGc                                    >  5:318930/1‑148 (MQ=255)                                                                                                                       gCTTGCGCGGGCAGGTGCTCAAGCAGACCCGCCCCGTGGGGTCAGAAGTGGTAGTACATGCCTAGGGAGACGTTGCTTGGGTTATCGCCCGCCTGAT‑CCACCGGGGTG‑CCGGCGTAGGTGACCGACGAGGCGCGCTGGTTGGCGATCAt                              <  2:295372/149‑1 (MQ=255)                                                                                                                        cTTGCGCGGGCAGGTGCTCAAGCAGACCCGCCCCGTGGGGTCAGAAGTGGTAGTACATGCCTAGTGAGACGTTGCTTGGGTTATCGCCCGCCTGAT‑CCACCGGGGTG‑CCGGCGTAGGTGACCGACGAGGCGCGCTGGTTGGCGATCATg                             >  2:74470/1‑149 (MQ=255)                                                                                                                             gcgGGCAGGTGCTCAAGCAGACCCGCCCCGTGGGGTCAGAAGTGGTAGTACATGCCTAGTGAGACGTTGCTTGGGTTATCGCCCGCCTGAT‑CCACCGGGGTG‑CCGGCGTAGGTGACCGACGAGGCGCGCTGGTTGGCGATCATGCCAAg                        <  6:331923/149‑1 (MQ=255)                                                                                                                             gcgGGCAGGTGCTCAAGCAGACCCGCCCCGTGGGGTCAGAAGTGGTAGTACATGCCTAGTGAGACGTTGCTTGGGTTATCGCCCGCCTGAT‑CCACCGGGGTG‑CCGGCGTAGGTGACCGACGAGGCGCGCTGGTTGGCGATCATGCCAAg                        <  7:715/149‑1 (MQ=255)                                                                                                                              cgGGCAGGTGCTCAAGCAGACCCGCCCCGTGGGGTCAGAAGTGGTAGTACATGCCTAGTGAGACGTTGCTTGGGTTATCGCCCGCCTGAT‑CCACCGGGGTGCCCGGCGTAGGTGACCGACGAGGCGCGCTGGTTGGCGATCATGCCAAg                        <  1:74470/149‑1 (MQ=255)                                                                                                                              cgGGCAGGTGCTCAAGCAGACCCGCCCCGTGGGGTCAGAAGTGGTAGTACATGCCTAGTGAGACGTTGCTTGGGTTATCGCCCGCCTGAT‑CCACCGGGGTG‑CCGGCGTAGGTGACCGACGAGGCGCGCTGGTTGGCGATCATGCCAAgg                       >  7:48518/1‑149 (MQ=255)                                                                                                                                     gTGCTCAAGCAGACCCGCCCCGTGGGGTCAGAAGTGGTAGTACATGCCTAGTGAGACGTTGCTTGGGTTATCGCCCGCCTGAT‑CCACCGGGGTG‑CCGGCGTAGGTGACCGACGAGGCGCGCTGGTTGGCGATCATGCCAAGGCGTCCa                 >  6:241214/1‑148 (MQ=255)                                                                                                                                     gTGCTCAAGCAGACCCGCCCCGTGGGGTCAGAAGTGGTAGTACATGCCTAGTGAGACGTTGCTTGGGTTATCGCCCGCCTGAT‑CCACCGGGGTG‑CCGGCGAAGCAGACCGACGAGGCGCGCTGGTTGGCGATCATGCCAAGGCGTCCa                 >  1:302594/1‑148 (MQ=255)                                                                                                                                      tGCTCAAGCAGACCCGCCCCGTGGGGTCAGAAGTGGTAGTACATGCCTAGTGAGACGTTGCTTGGGTTATCGCCCGCCTGAT‑CCACCGGGGTG‑CCGGCGTAGGTGACCGACGAGGCGCGCTGGTTGGCGATCATGCCAAGGCGTCCAt                >  5:122657/1‑148 (MQ=255)                                                                                                                                        cTCAAGCAGACCCGCCCCGTGGGGTCAGAAGTGGTAGTACATGCCTAGTGAGACGTTGCTTGGGTTATCGCCCGCCTGAT‑CCACCGGGGTG‑CCGGCGTAGGTGACCGACGAGGCGCGCTGGTTGGCGATCATGCCAAGGCGTCCATa               >  7:44944/1‑147 (MQ=255)                                                                                                                                           aaGCAGACCCGCCCCGTGGGGTCAGAAGTGGTAGTACATGCCTAGTGAGACGTTGCTTGGGTTATCGCCCGCCTGAT‑CCACCGGGGTG‑CCGGCGTAGGTGACCGACGAGGCGCGCTGGTTGGCGATCATGCCAAGGCGTCCATAAAggg          <  6:318930/149‑1 (MQ=255)                                                                                                                                            aGCAGACCCGCCCCGTGGGGTCAGAAGTGGTAGTACATGCCTAGTGAGACGTTGCTTGGGTTATCGCCCGCCTGAT‑CCACCGGGGTG‑CCGGCGTAGGTGACCGACGAGGCGCGCTGGTTGGCGATCATGCCAAGGCGTCCATAAAGGGc         <  6:122657/149‑1 (MQ=255)                                                                                                                                                   cCGCCCCGTGGGGTCAGAAGTGGTAGTACATGCCTAGTGAGACGTTGCTTGGGTTATCGCCCGCCTGAT‑CCACCGGGGTG‑CCGGCGTAGGTGACCGACGAGGCGCGCTGGTTGGCGATCATGCCAAGGCGTCCATAAAGGGCCCAGCgg  >  5:334354‑M2/2‑149 (MQ=255)                                                                                                                                                   cCGCCCCGTGGGGTCAGAAGTGGTAGTACATGCCTAGTGAGACGTTGCTTGGGTTATCGCCCGCCTGAT‑CCACCGGGGTG‑CCGGCGTAGGTGACCGACGAGGCGCGCTGGTTGGCGATCATGCCAAGGCGTCCATAAAGGGCCCAGCgg  >  5:339728‑M2/2‑149 (MQ=255)                                                                                                                                                   cCGCCCCGTGGGGTCAGAAGTGGTAGTACATGCCTAGTGAGACGTTGCTTGGGTTATCGCCCGCCTGAT‑CCACCGGGGTG‑CCGGCGTAGGTGACCGACGAGGCGCGCTGGTTGGCGATCATGCCAAGGCGTCCATAAAGGGCCCAGCgg  >  3:210477‑M2/2‑149 (MQ=255)                                                                                                                                                   cCGCCCCGTGGGGTCAGAAGTGGTAGTACATGCCTAGTGAGACGTTGCTTGGGTTATCGCCCGCCTGAT‑CCACCGGGGTG‑CCGGCGTAGGTGACCGACGAGGCGCGCTGGTTGGCGATCATGCCAAGGCGTCCATAAAGGGCCCAGCgg  >  6:152423‑M2/2‑149 (MQ=255)                                                                                                                                                    |                                                                                                                                                      GGTATCGATTGCGAGTTCGTCGCCATGGCGGTGCAGGAGTTGATTCCGGATTACCCCATCAATCTGGTCTGCATCGACCGCCACAGCCTCACGGCGCCTGCCCAGGAGCTGTTCCACAGCTTGCGCGGGCAGGTGCTCAAGCAGACCCGCCCCGTGGGGTCAGAAGTGGTAGTACATGCCTAGTGAGACGTTGCTTGGGTTATCGCCCGCCTGAT‑CCACCGGGGTG‑CCGGCGTAGGTGACCGACGAGGCGCGCTGGTTGGCGATCATGCCAAGGCGTCCATAAAGGGCCCAGCGG  >  NC_002947/3092796‑3093090

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.